| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g26801 | 9:4,076,644-4,077,870 | - | C2H9g03970 | CX9g057750 | LOC_Os03g31134 | Os03g0424800 | - | Detail |
| C1H9g07929 | 9:4,081,870-4,085,677 | - | C2H9g04994 | CX9g054915 | LOC_Os09g08430 | Os09g0258600 | - | Detail |
| C1H9g13981 | 9:4,101,625-4,102,422 | + | C2H9g09636 | CX9g056739 | LOC_Os09g08270 | Os09g0256600 | - | Detail |
| C1H9g01470 | 9:4,106,683-4,107,084 | + | C2H9g09579 | CX9g056409 | LOC_Os09g08280 | Os09g0256700 | - | Detail |
| C1H9g25599 | 9:4,120,022-4,120,819 | + | C2H9g20708 | CX9g057129 | LOC_Os09g08270 | Os09g0256600 | - | Detail |
| C1H9g05698 | 9:4,167,112-4,168,218 | + | C2H9g04777 | CX9g054865 | LOC_Os09g08570 | Os09g0260200 | - | Detail |
| C1H9g21104 | 9:4,174,579-4,175,677 | + | C2H9g21698 | CX9g054865 | LOC_Os09g08580 | Os09g0259500 | - | Detail |
| C1H9g30517 | 9:4,216,211-4,224,611 | - | C2H9g15136 | CX9g056387 | LOC_Os09g08660 | Os09g0261300 | - | Detail |
| C1H9g04788 | 9:4,235,661-4,249,806 | + | - | CX9g055912 | LOC_Os09g08670 | Os09g0261400 | - | Detail |
| C1H9g27282 | 9:4,271,873-4,275,003 | + | C2H9g00830 | CX9g055157 | LOC_Os09g08720 | Os09g0262000 | - | Detail |
| C1H9g31888 | 9:4,291,542-4,300,699 | - | C2H9g28588 | CX9g056081 | LOC_Os09g08730 | Os09g0497100 | - | Detail |
| C1H9g04333 | 9:4,316,116-4,319,317 | - | C2H9g30360 | CX9g055944 | LOC_Os09g08920 | Os09g0263933 | OsF3'H5 | Detail |
| C1H9g30168 | 9:4,343,939-4,346,546 | - | C2H9g20438 | CX9g056167 | LOC_Os09g08990 | Os09g0264400 | - | Detail |
| C1H9g15533 | 9:4,396,050-4,396,703 | + | C2H9g20232 | CX9g055239 | LOC_Os09g09220 | Os09g0351800 | - | Detail |
| C1H9g30452 | 9:4,398,223-4,404,342 | + | C2H9g15664 | CX9g057929 | LOC_Os09g09220 | Os09g0353200 | - | Detail |
| C1H9g00023 | 9:4,406,076-4,415,340 | - | C2H9g15012 | CX9g056560 | LOC_Os09g08720 | Os09g0262000 | - | Detail |
| C1H9g17395 | 9:4,408,235-4,408,483 | + | - | - | - | - | - | Detail |
| C1H9g11406 | 9:4,441,043-4,442,434 | + | C2H9g14834 | CX9g058195 | LOC_Os09g09320 | Os09g0266000 | - | Detail |
| C1H9g26799 | 9:4,452,324-4,454,677 | - | C2H9g28356 | CX9g056448 | - | Os09g0246700 | - | Detail |
| C1H9g22089 | 9:4,460,093-4,461,678 | - | C2H9g22212 | CX9g056448 | - | Os09g0266100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g27162 | 9:19,021,887-19,023,725 | - | C1H9g18815 | CX9g057033 | LOC_Os09g38920 | Os09g0497500 | - | Detail |
| C2H9g03456 | 9:19,024,895-19,026,937 | - | C1H9g04134 | CX9g057411 | LOC_Os09g38930 | Os09g0562750 | - | Detail |
| C2H9g09986 | 9:19,040,180-19,040,616 | + | C1H9g07046 | CX9g055362 | LOC_Os09g38670 | Os09g0559600 | - | Detail |
| C2H9g06709 | 9:19,042,621-19,048,413 | - | C1H9g06523 | CX9g055046 | LOC_Os09g38960 | Os09g0563200 | OsHAK18 | Detail |
| C2H9g01538 | 9:19,051,561-19,057,154 | + | C1H9g19754 | CX9g057500 | LOC_Os09g38970 | Os09g0563250 | - | Detail |
| C2H9g16021 | 9:19,057,688-19,061,764 | + | C1H9g21219 | CX9g054934 | LOC_Os09g38980 | Os09g0563300 | TCD9, OsCPn60alpha3, OsCPn60α3 | Detail |
| C2H9g21433 | 9:19,071,960-19,074,845 | + | C1H9g01697 | CX9g056918 | LOC_Os09g39020 | Os09g0563700 | - | Detail |
| C2H9g26806 | 9:19,076,762-19,086,439 | - | C1H9g21274 | CX9g057338 | LOC_Os09g39034 | Os09g0563800 | - | Detail |
| C2H9g27013 | 9:19,092,614-19,094,426 | - | C1H9g07375 | CX9g058103 | LOC_Os09g39060 | Os09g0564000 | - | Detail |
| C2H9g21279 | 9:19,098,085-19,100,923 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39070 | Os09g0564200 | - | Detail |
| C2H9g23865 | 9:19,108,617-19,110,153 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39090 | Os09g0564400 | - | Detail |
| C2H9g13270 | 9:19,121,816-19,124,616 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39110 | Os09g0564600 | - | Detail |
| C2H9g00317 | 9:19,126,925-19,128,682 | - | C1H9g27358 | CX9g058103 | LOC_Os09g39120 | Os09g0564700 | - | Detail |
| C2H9g01274 | 9:19,137,269-19,139,208 | - | C1H9g06269 | CX9g058103 | LOC_Os09g39160 | Os09g0565000 | - | Detail |
| C2H9g29707 | 9:19,176,003-19,178,915 | + | C1H9g06269 | CX9g058103 | LOC_Os09g39160 | Os09g0565000 | - | Detail |
| C2H9g17980 | 9:19,186,630-19,189,149 | - | C1H9g03665 | CX9g055784 | LOC_Os09g39180 | Os09g0565200 | OsCRP1 | Detail |
| C2H9g06735 | 9:19,189,868-19,191,873 | - | C1H9g23294 | CX9g055878 | LOC_Os09g39190 | Os09g0565300 | - | Detail |
| C2H9g05243 | 9:19,193,569-19,195,287 | - | C1H9g02800 | CX9g055878 | LOC_Os09g39190 | Os09g0565350 | - | Detail |
| C2H9g29461 | 9:19,195,507-19,199,219 | - | C1H9g15519 | CX9g056354 | LOC_Os09g39200 | Os09g0565400 | - | Detail |
| C2H9g27919 | 9:19,201,190-19,217,268 | + | C1H9g26476 | CX9g057714 | - | Os09g0565500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |