| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g00923 | 9:2,066,181-2,066,561 | + | C2H9g11221 | CX9g056587 | LOC_Os09g04624 | Os09g0132200 | - | Detail |
| C1H9g17567 | 9:2,076,246-2,077,694 | + | C2H9g11221 | CX9g056587 | LOC_Os09g04624 | Os09g0132200 | - | Detail |
| C1H9g25123 | 9:2,114,157-2,117,649 | - | C2H9g26710 | CX9g055949 | LOC_Os09g04670 | Os09g0132600 | OsMORF8-1 | Detail |
| C1H9g00018 | 9:2,125,894-2,128,290 | + | C2H9g12342 | CX9g058101 | LOC_Os09g04710 | Os09g0132900 | - | Detail |
| C1H9g13386 | 9:2,130,600-2,132,740 | - | C2H9g28536 | CX9g056234 | LOC_Os09g04720 | Os09g0133000 | - | Detail |
| C1H9g21676 | 9:2,137,114-2,141,853 | - | C2H9g12722 | CX9g056571 | LOC_Os09g04730 | Os09g0133200 | - | Detail |
| C1H9g18841 | 9:2,161,684-2,164,175 | + | C2H9g02102 | CX9g056741 | LOC_Os09g04790 | Os09g0133600 | - | Detail |
| C1H9g06051 | 9:2,180,377-2,184,547 | + | C2H9g30446 | CX9g054843 | LOC_Os09g04800 | Os09g0133700 | - | Detail |
| C1H9g04091 | 9:2,185,240-2,188,873 | - | C2H9g23487 | CX9g057963 | LOC_Os09g04810 | Os09g0133800 | - | Detail |
| C1H9g27229 | 9:2,207,644-2,211,037 | + | C2H9g09354 | CX9g057669 | LOC_Os09g04880 | Os09g0134400 | - | Detail |
| C1H9g22500 | 9:2,211,916-2,226,581 | - | C2H9g17319 | CX9g055891 | LOC_Os09g04890 | Os09g0134500 | OsTrx1, SDG723, OsSET33 | Detail |
| C1H9g06373 | 9:2,250,525-2,251,998 | - | C2H9g01165 | CX9g057577 | - | - | - | Detail |
| C1H9g25261 | 9:2,283,583-2,283,954 | - | - | - | - | - | - | Detail |
| C1H9g31813 | 9:2,399,692-2,401,443 | + | C2H9g09608 | CX9g057837 | LOC_Os09g05030 | Os09g0135800 | - | Detail |
| C1H9g09075 | 9:2,404,721-2,409,661 | - | C2H9g13689 | CX9g057815 | LOC_Os09g05020 | Os09g0135700 | OsPFA-DSP1 | Detail |
| C1H9g05034 | 9:2,415,460-2,415,966 | + | C2H9g25128 | CX9g055083 | - | - | - | Detail |
| C1H9g29941 | 9:2,677,442-2,682,423 | - | C2H9g20248 | CX9g057145 | LOC_Os09g06230 | Os09g0237600 | - | Detail |
| C1H9g27406 | 9:2,709,931-2,710,493 | + | - | - | - | - | - | Detail |
| C1H9g17951 | 9:2,713,164-2,714,055 | + | - | - | LOC_Os09g04460 | - | - | Detail |
| C1H9g27131 | 9:2,745,042-2,745,559 | + | C2H9g17568 | CX9g056399 | - | Os09g0238700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g22494 | 5:16,642,716-16,645,805 | - | C1H5g26959 | CX5g038106 | LOC_Os05g33600 | Os05g0405600 | - | Detail |
| C2H5g11829 | 5:16,655,985-16,661,923 | + | C1H5g04085 | CX5g040922 | LOC_Os05g33610 | Os05g0405900 | - | Detail |
| C2H5g25939 | 5:16,663,546-16,666,879 | + | C1H5g22041 | CX5g041090 | LOC_Os05g33620 | Os05g0406000 | - | Detail |
| C2H5g22907 | 5:16,667,446-16,671,338 | - | C1H5g10446 | CX5g040421 | LOC_Os05g33630 | Os05g0406100 | - | Detail |
| C2H5g21437 | 5:16,686,600-16,698,456 | - | C1H5g00299 | CX5g040140 | LOC_Os05g33644 | Os05g0406100 | - | Detail |
| C2H5g07531 | 5:16,713,512-16,714,696 | + | C1H5g09689 | CX5g038444 | LOC_Os05g33690 | Os05g0406800 | - | Detail |
| C2H5g01393 | 5:16,717,738-16,718,662 | - | - | CX5g039242 | - | - | - | Detail |
| C2H5g17544 | 5:16,718,825-16,719,860 | + | C1H5g02644 | CX5g040199 | LOC_Os05g33700 | Os05g0407100 | - | Detail |
| C2H5g09572 | 5:16,720,279-16,728,625 | - | C1H5g06235 | CX5g039305 | LOC_Os05g33710 | Os05g0407200 | - | Detail |
| C2H5g14010 | 5:16,741,952-16,744,658 | + | C1H5g07655 | CX5g040161 | LOC_Os05g33730 | Os05g0407500 | GID1, gid1, OsGID1, Thl, Os GID1 | Detail |
| C2H5g30500 | 5:16,761,498-16,767,214 | - | C1H5g16377 | CX5g040515 | LOC_Os05g33760 | Os05g0407900 | - | Detail |
| C2H5g10487 | 5:16,792,590-16,793,159 | + | - | - | - | - | - | Detail |
| C2H5g11444 | 5:16,793,248-16,801,244 | + | C1H5g18086 | CX5g038802 | LOC_Os05g33810 | Os05g0408200 | OsSPL9 | Detail |
| C2H5g22366 | 5:16,803,441-16,806,745 | - | C1H5g22231 | CX5g040901 | LOC_Os05g33820 | Os05g0408300 | - | Detail |
| C2H5g14510 | 5:16,822,950-16,823,828 | - | C1H5g07753 | CX5g037819 | LOC_Os05g33830 | Os05g0408800 | - | Detail |
| C2H5g20401 | 5:16,826,385-16,826,935 | - | C1H5g01736 | CX5g037932 | LOC_Os05g33910 | Os01g0162101 | - | Detail |
| C2H5g21665 | 5:16,827,319-16,833,393 | - | C1H5g28806 | CX5g039038 | LOC_Os05g33840 | Os05g0408900 | - | Detail |
| C2H5g22578 | 5:16,840,873-16,845,350 | - | C1H5g13458 | CX5g040687 | LOC_Os05g33850 | Os05g0409000 | - | Detail |
| C2H5g22810 | 5:16,848,921-16,849,907 | + | C1H5g23907 | CX5g036877 | LOC_Os05g33860 | Os05g0409100 | - | Detail |
| C2H5g14027 | 5:16,857,988-16,859,428 | + | C1H5g25708 | CX5g038152 | LOC_Os05g33870 | Os05g0409200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |