| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g15386 | 9:560,860-562,554 | + | C2H9g11873 | CX9g056345 | - | Os09g0499600 | - | Detail |
| C1H9g13855 | 9:623,057-625,665 | + | C2H12g14559 | - | - | - | - | Detail |
| C1H9g01199 | 9:679,954-683,511 | - | - | - | - | - | - | Detail |
| C1H9g28229 | 9:683,436-690,805 | + | C2H9g16224 | CX9g056897 | LOC_Os09g02130 | Os09g0108400 | - | Detail |
| C1H9g14656 | 9:700,742-706,531 | + | C2H9g00527 | CX9g058002 | LOC_Os09g02140 | Os09g0108600 | - | Detail |
| C1H9g00172 | 9:731,470-737,256 | - | C2H9g06082 | CX9g056152 | LOC_Os09g02170 | Os09g0109500 | - | Detail |
| C1H9g18224 | 9:738,297-738,811 | + | C2H9g24122 | - | LOC_Os09g02180 | Os09g0109600 | OsDSSR1 | Detail |
| C1H9g23282 | 9:747,595-759,509 | + | C2H9g12447 | CX9g055136 | LOC_Os09g02214 | Os09g0109800 | - | Detail |
| C1H9g02589 | 9:773,790-776,808 | + | C2H9g19646 | CX9g057148 | LOC_Os09g02250 | Os09g0110100 | - | Detail |
| C1H9g26312 | 9:782,947-785,334 | - | C2H9g17997 | CX9g057282 | LOC_Os09g02260 | Os09g0110200 | - | Detail |
| C1H9g20364 | 9:788,433-790,047 | + | C2H9g29161 | CX9g055039 | LOC_Os05g20980 | - | - | Detail |
| C1H9g14418 | 9:793,549-797,827 | - | C2H9g02321 | CX9g056650 | LOC_Os09g02270 | Os09g0110300 | - | Detail |
| C1H9g20445 | 9:803,591-815,533 | + | C2H9g12544 | CX9g057923 | LOC_Os09g02284 | Os09g0110400 | - | Detail |
| C1H9g19393 | 9:865,047-868,364 | - | C2H9g11873 | CX9g056345 | LOC_Os09g26680 | Os09g0499600 | - | Detail |
| C1H9g30488 | 9:878,019-879,284 | - | C2H9g25064 | CX9g056730 | LOC_Os09g02360 | Os09g0111100 | OsCYCD3;1 | Detail |
| C1H9g11354 | 9:902,898-905,426 | - | C2H9g23649 | CX9g055416 | LOC_Os09g02400 | Os09g0111800 | - | Detail |
| C1H9g22524 | 9:921,060-926,516 | - | C2H9g07990 | CX9g057431 | LOC_Os09g02440 | Os09g0112400 | - | Detail |
| C1H9g04764 | 9:961,548-961,811 | - | C2H9g03016 | CX9g056966 | LOC_Os09g02550 | - | - | Detail |
| C1H9g19720 | 9:970,268-970,914 | + | C2H9g16338 | CX9g054924 | - | - | - | Detail |
| C1H9g09485 | 9:975,727-976,572 | - | C2H9g23700 | CX9g057313 | - | Os01g0608101 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g11407 | 1:9,023,639-9,023,920 | - | - | - | LOC_Os01g17980 | - | - | Detail |
| C2H1g22929 | 1:9,028,394-9,032,997 | + | C1H1g00974 | CX1g006919 | LOC_Os01g17990 | - | - | Detail |
| C2H1g07113 | 1:9,058,742-9,062,526 | - | C1H1g19330 | CX1g000239 | LOC_Os01g18050 | Os01g0282800 | OsTUB1 | Detail |
| C2H1g14204 | 1:9,073,023-9,078,255 | - | C1H1g12917 | CX1g003294 | LOC_Os01g18060 | Os01g0283000 | - | Detail |
| C2H1g26601 | 1:9,078,275-9,082,841 | + | C1H1g28761 | CX1g007053 | LOC_Os01g18070 | Os01g0283100 | - | Detail |
| C2H1g01489 | 1:9,095,726-9,096,517 | + | - | - | LOC_Os01g18080 | Os01g0283300 | - | Detail |
| C2H1g29322 | 1:9,097,981-9,098,328 | + | - | CX1g005891 | LOC_Os01g18090 | Os01g0283400 | - | Detail |
| C2H1g04439 | 1:9,099,489-9,101,501 | - | C1H1g04332 | CX1g005282 | LOC_Os01g18100 | Os01g0283500 | - | Detail |
| C2H1g27306 | 1:9,111,838-9,113,757 | + | C1H1g15010 | CX1g001578 | LOC_Os01g18110 | Os01g0283600 | - | Detail |
| C2H1g06247 | 1:9,118,383-9,121,287 | - | C1H1g08875 | CX1g006385 | - | Os05g0435500 | - | Detail |
| C2H1g08442 | 1:9,121,349-9,121,684 | + | C1H1g09834 | - | - | - | - | Detail |
| C2H1g27708 | 1:9,123,503-9,126,848 | + | C1H1g15010 | CX1g005965 | LOC_Os01g18120 | Os01g0283700 | - | Detail |
| C2H1g22354 | 1:9,131,494-9,132,603 | + | C1H1g31050 | CX1g005156 | LOC_Os01g18150 | Os01g0284300 | - | Detail |
| C2H1g13905 | 1:9,134,569-9,135,338 | - | C1H1g09627 | CX1g002731 | LOC_Os01g18170 | Os01g0284500 | OsGER4 | Detail |
| C2H1g17254 | 1:9,142,721-9,145,663 | + | C1H1g10680 | CX1g000924 | LOC_Os01g18210 | Os01g0284700 | - | Detail |
| C2H1g07308 | 1:9,150,165-9,152,540 | - | C1H1g13588 | CX1g001111 | LOC_Os01g18220 | Os01g0284900 | - | Detail |
| C2H1g20440 | 1:9,158,775-9,159,592 | - | C1H1g17641 | CX1g003253 | LOC_Os01g18230 | Os01g0759700 | - | Detail |
| C2H1g10789 | 1:9,167,708-9,169,939 | - | C1H1g06479 | CX1g006251 | LOC_Os01g18240 | Os01g0285300 | MYB61, OsMYB55/61, JMTF1 | Detail |
| C2H1g03219 | 1:9,209,366-9,212,756 | + | C1H1g05697 | CX1g000217 | LOC_Os01g18280 | Os01g0286000 | - | Detail |
| C2H1g23388 | 1:9,217,932-9,221,431 | - | C1H1g18723 | CX1g006989 | LOC_Os01g02110 | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |