| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g28114 | 9:127,927-128,471 | - | C2H9g05109 | - | - | - | - | Detail |
| C1H9g14009 | 9:138,087-138,631 | - | C2H9g05109 | - | - | - | - | Detail |
| C1H9g27378 | 9:148,248-148,792 | - | C2H9g05109 | - | - | - | - | Detail |
| C1H9g01621 | 9:158,408-158,952 | - | C2H9g05109 | - | - | - | - | Detail |
| C1H9g09939 | 9:168,569-169,113 | - | C2H9g05109 | - | - | - | - | Detail |
| C1H9g10841 | 9:222,155-222,469 | + | - | - | - | - | - | Detail |
| C1H9g20378 | 9:225,139-229,991 | - | C2H9g07486 | CX9g055204 | LOC_Os09g01140 | Os09g0100800 | OsGeBP11 | Detail |
| C1H9g29200 | 9:259,419-263,710 | - | C2H9g02141 | CX9g056163 | LOC_Os09g01290 | Os09g0101100 | - | Detail |
| C1H9g04128 | 9:301,326-311,063 | - | C2H9g15899 | CX9g055897 | LOC_Os09g01360 | Os09g0101800 | - | Detail |
| C1H9g17462 | 9:311,725-312,382 | - | C2H9g15899 | CX9g055897 | LOC_Os09g01360 | Os09g0101800 | - | Detail |
| C1H9g17478 | 9:331,713-332,598 | - | - | - | - | - | - | Detail |
| C1H9g27523 | 9:368,464-377,135 | + | C2H9g24411 | CX9g057870 | LOC_Os09g01590 | Os09g0103100 | - | Detail |
| C1H9g01741 | 9:380,162-385,109 | + | C2H9g22972 | CX9g057297 | LOC_Os09g01600 | Os09g0103200 | - | Detail |
| C1H9g12264 | 9:397,300-402,931 | + | C2H9g07969 | CX9g055170 | LOC_Os09g01620 | Os09g0103500 | - | Detail |
| C1H9g24389 | 9:405,379-412,173 | - | C2H9g23774 | CX9g055607 | LOC_Os09g01630 | Os09g0103600 | - | Detail |
| C1H9g06955 | 9:441,136-447,435 | + | C2H9g22729 | CX9g055907 | LOC_Os09g01650 | Os09g0103800 | - | Detail |
| C1H9g22354 | 9:471,216-474,715 | - | C2H9g16634 | CX9g057376 | LOC_Os09g01680 | Os09g0104200 | RAD51D, OsRAD51D.3, OsRAD51D, OsRad51D | Detail |
| C1H9g21586 | 9:474,785-477,542 | + | C2H9g14701 | - | LOC_Os09g01690 | Os09g0104300 | - | Detail |
| C1H9g13033 | 9:512,612-515,182 | - | C2H9g17453 | CX9g054917 | LOC_Os09g01790 | - | - | Detail |
| C1H9g05252 | 9:558,682-560,315 | + | C2H9g11873 | CX9g056345 | LOC_Os07g15420 | Os09g0499600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g25631 | 2:19,963,268-19,970,918 | - | C1H2g00744 | CX2g022954 | LOC_Os02g35100 | Os02g0556900 | - | Detail |
| C2H2g25885 | 2:19,972,524-19,973,585 | + | C1H2g26904 | CX2g023433 | LOC_Os02g35110 | Os02g0557000 | - | Detail |
| C2H2g25966 | 2:19,978,202-19,983,225 | + | C1H2g02599 | CX2g021519 | LOC_Os02g35130 | Os02g0557100 | - | Detail |
| C2H2g29414 | 2:19,992,631-19,998,513 | + | C1H2g18537 | CX2g019215 | LOC_Os02g35140 | Os02g0557200 | OsARF7 | Detail |
| C2H2g24750 | 2:19,999,229-20,002,655 | - | C1H2g20595 | CX2g024401 | LOC_Os02g35144 | Os02g0557300 | - | Detail |
| C2H2g17993 | 2:20,005,686-20,010,721 | + | C1H2g28198 | CX2g023209 | LOC_Os02g35150 | Os02g0557500 | - | Detail |
| C2H2g05110 | 2:20,010,921-20,017,195 | - | C1H2g02727 | CX2g019405 | LOC_Os02g35160 | Os02g0557600 | - | Detail |
| C2H2g21439 | 2:20,017,386-20,019,964 | + | C1H2g22627 | CX2g019094 | LOC_Os02g35170 | Os02g0557700 | - | Detail |
| C2H2g04262 | 2:20,024,704-20,027,060 | - | C1H2g17970 | CX2g024008 | LOC_Os02g35180 | Os02g0557800 | OSRR2, OsRR2, Osrr2, rr2 | Detail |
| C2H2g22443 | 2:20,045,447-20,056,506 | - | C1H2g26364 | CX2g021923 | LOC_Os02g35190 | Os02g0558100 | - | Detail |
| C2H2g24544 | 2:20,065,406-20,068,274 | - | C1H2g18671 | CX2g021499 | LOC_Os02g35220 | Os02g0558500 | - | Detail |
| C2H2g03892 | 2:20,069,593-20,072,901 | - | C1H2g31485 | CX2g019333 | LOC_Os02g35230 | Os02g0558600 | - | Detail |
| C2H2g30329 | 2:20,089,341-20,092,219 | + | C1H2g29418 | CX2g021445 | LOC_Os02g35300 | Os02g0559300 | - | Detail |
| C2H2g10845 | 2:20,092,291-20,092,497 | + | C1H2g29418 | - | - | - | - | Detail |
| C2H2g07663 | 2:20,093,036-20,095,926 | - | C1H2g18296 | CX2g022839 | LOC_Os02g35310 | Os02g0559400 | - | Detail |
| C2H2g09854 | 2:20,096,787-20,098,303 | + | - | - | - | - | - | Detail |
| C2H2g23968 | 2:20,099,673-20,100,826 | - | C1H2g24849 | CX2g019879 | LOC_Os02g35315 | Os02g0560450 | - | Detail |
| C2H2g21023 | 2:20,108,732-20,110,913 | + | C1H2g14511 | CX2g024211 | - | - | - | Detail |
| C2H2g04149 | 2:20,117,962-20,120,623 | - | C1H10g00257 | CX1g000431 | LOC_Os05g46954 | Os05g0547700 | - | Detail |
| C2H2g27531 | 2:20,123,347-20,123,952 | - | C1H2g09758 | CX2g020926 | LOC_Os02g35440 | Os02g0561900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |