| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H8g05373 | 8:23,622,329-23,623,816 | - | C2H8g19795 | CX8g054686 | LOC_Os08g32500 | Os08g0420600 | - | Detail |
| C1H8g16790 | 8:23,627,435-23,636,884 | + | C2H8g07185 | CX8g053732 | LOC_Os08g42950 | Os08g0542600 | - | Detail |
| C1H8g10833 | 8:23,649,207-23,653,447 | + | C2H8g19971 | CX8g054814 | LOC_Os08g42960 | Os08g0542700 | - | Detail |
| C1H8g06340 | 8:23,654,848-23,660,503 | + | C2H8g15760 | - | LOC_Os08g42980 | Os08g0542900 | - | Detail |
| C1H8g07310 | 8:23,661,028-23,672,482 | - | C2H8g07268 | CX8g052328 | LOC_Os08g43000 | Os08g0543050 | - | Detail |
| C1H8g20231 | 8:23,672,715-23,673,190 | + | C2H8g15760 | - | LOC_Os08g42980 | Os08g0542900 | - | Detail |
| C1H8g08792 | 8:23,673,710-23,679,324 | - | C2H8g07268 | CX8g052328 | LOC_Os08g42990 | Os08g0543000 | - | Detail |
| C1H8g16724 | 8:23,692,376-23,693,113 | - | C2H8g07185 | CX8g051910 | LOC_Os08g43050 | Os08g0543500 | - | Detail |
| C1H8g07357 | 8:23,711,735-23,713,136 | + | C2H8g18320 | - | LOC_Os08g43020 | Os08g0543400 | - | Detail |
| C1H8g16513 | 8:23,714,299-23,716,964 | + | C2H8g25014 | - | LOC_Os08g43040 | Os08g0543400 | - | Detail |
| C1H8g16004 | 8:23,719,191-23,726,206 | - | C2H8g25889 | CX8g053219 | LOC_Os08g43060 | Os08g0543600 | - | Detail |
| C1H8g21579 | 8:23,738,664-23,739,178 | - | C2H8g23143 | CX8g054600 | LOC_Os08g43080 | Os08g0163300 | - | Detail |
| C1H8g03294 | 8:23,746,228-23,750,380 | + | C2H8g01629 | CX8g051044 | LOC_Os08g43090 | Os08g0543900 | - | Detail |
| C1H8g27555 | 8:23,753,595-23,754,545 | - | C2H8g29387 | CX8g051995 | - | Os09g0282701 | - | Detail |
| C1H8g12057 | 8:23,759,875-23,761,211 | + | - | CX8g054170 | LOC_Os08g38800 | Os08g0496700 | - | Detail |
| C1H8g26625 | 8:23,778,168-23,787,414 | + | C2H8g26111 | CX8g054554 | LOC_Os08g43120 | Os08g0544400 | OsPDR1, OsPDR1.1, OsABCG45 | Detail |
| C1H8g10983 | 8:23,779,704-23,786,525 | - | C2H8g12204 | - | - | - | - | Detail |
| C1H8g06368 | 8:23,787,821-23,800,868 | - | C2H8g27217 | CX8g052839 | LOC_Os08g43130 | Os08g0544500 | LPL3, DS8 | Detail |
| C1H8g29274 | 8:23,805,816-23,806,019 | - | C2H8g08314 | - | - | - | - | Detail |
| C1H8g00106 | 8:23,806,438-23,807,559 | - | C2H8g03110 | CX8g051277 | LOC_Os08g43160 | Os08g0544800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g09365 | 3:14,022,692-14,029,760 | - | C1H3g05327 | CX3g027782 | LOC_Os03g27510 | Os03g0393700 | - | Detail |
| C2H3g30087 | 3:14,032,064-14,034,436 | - | C1H3g01352 | CX3g026293 | LOC_Os03g32580 | Os03g0211900 | - | Detail |
| C2H3g11623 | 3:14,034,559-14,035,580 | - | C1H3g05517 | CX3g028044 | LOC_Os03g28270 | Os03g0400800 | - | Detail |
| C2H3g10908 | 3:14,044,828-14,047,298 | - | C1H3g19955 | CX3g027788 | LOC_Os03g32580 | Os03g0145102 | - | Detail |
| C2H3g03280 | 3:14,048,897-14,050,147 | + | - | - | - | - | - | Detail |
| C2H3g07142 | 3:14,050,595-14,051,936 | + | - | - | - | - | - | Detail |
| C2H3g17405 | 3:14,057,376-14,058,446 | - | - | - | - | - | - | Detail |
| C2H3g04527 | 3:14,069,232-14,069,991 | - | C1H3g05517 | CX3g028044 | LOC_Os03g28270 | Os03g0400800 | - | Detail |
| C2H3g28189 | 3:14,070,010-14,070,943 | - | C1H3g05517 | CX3g028044 | LOC_Os03g28270 | Os03g0400800 | - | Detail |
| C2H3g21452 | 3:14,083,851-14,085,452 | - | C1H3g17401 | CX3g029574 | - | Os03g0184000 | OsPDS | Detail |
| C2H3g10220 | 3:14,094,321-14,100,635 | - | C1H3g27278 | CX3g031229 | LOC_Os03g28270 | Os03g0400800 | - | Detail |
| C2H3g08253 | 3:14,104,054-14,104,308 | - | - | - | - | - | - | Detail |
| C2H3g06277 | 3:14,167,794-14,171,626 | - | C1H3g13238 | CX3g029516 | LOC_Os03g32580 | Os03g0773700 | - | Detail |
| C2H3g13071 | 3:14,219,645-14,219,983 | - | - | - | LOC_Os02g28210 | - | - | Detail |
| C2H3g00521 | 3:14,231,740-14,241,021 | - | C1H3g28596 | CX3g026827 | LOC_Os03g27550 | Os03g0393300 | - | Detail |
| C2H3g03469 | 3:14,295,554-14,300,370 | - | C1H3g26998 | CX3g027706 | LOC_Os03g27550 | Os03g0393700 | - | Detail |
| C2H3g01147 | 3:14,307,579-14,309,156 | + | C1H3g17152 | CX3g026110 | LOC_Os03g27610 | Os03g0393900 | OsMATL, OspPLAIIφ, OspPLAIIphi, OsPLP1, PLP1, OspPLAIIbeta | Detail |
| C2H3g26978 | 3:14,380,764-14,384,352 | - | C1H3g03234 | CX3g027952 | LOC_Os03g27760 | Os03g0394900 | - | Detail |
| C2H3g09617 | 3:14,398,273-14,401,752 | - | C1H3g11733 | CX3g030447 | LOC_Os03g27770 | Os03g0395000 | - | Detail |
| C2H3g01443 | 3:14,407,064-14,410,216 | + | C1H3g19183 | CX3g028476 | LOC_Os03g27780 | Os03g0395100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |