| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g03229 | 1:1,949,500-1,952,519 | - | C2H1g05668 | CX1g001789 | LOC_Os01g04990 | Os01g0143100 | - | Detail |
| C1H1g29677 | 1:1,955,387-1,956,097 | + | C2H1g12663 | CX1g006394 | LOC_Os01g05000 | Os01g0921800 | WCR1 | Detail |
| C1H1g02008 | 1:1,956,816-1,959,133 | - | C2H1g13945 | - | LOC_Os01g05010 | Os01g0143300 | - | Detail |
| C1H1g24343 | 1:1,960,741-1,963,203 | - | C2H1g15469 | CX1g006849 | LOC_Os01g05020 | Os01g0143400 | - | Detail |
| C1H1g07651 | 1:1,971,510-1,972,944 | - | C2H1g12519 | - | LOC_Os01g05050 | Os01g0143700 | - | Detail |
| C1H1g29985 | 1:1,973,656-1,975,598 | - | C2H1g06977 | - | LOC_Os01g05060 | Os01g0143800 | - | Detail |
| C1H1g10063 | 1:1,978,164-1,981,143 | - | C2H1g23660 | CX1g005129 | LOC_Os01g05070 | Os01g0144000 | - | Detail |
| C1H1g14146 | 1:1,982,269-1,983,997 | - | C2H1g10033 | CX1g005129 | LOC_Os01g05080 | Os01g0144100 | - | Detail |
| C1H1g07723 | 1:1,984,958-1,986,809 | + | C2H3g05697 | CX1g001193 | LOC_Os01g05090 | Os01g0144200 | - | Detail |
| C1H1g29569 | 1:1,987,462-1,988,924 | - | C2H1g12529 | CX1g000107 | LOC_Os01g05100 | Os01g0144300 | - | Detail |
| C1H1g20324 | 1:1,990,017-1,995,899 | - | C2H1g15155 | CX1g000964 | - | Os01g0144340 | - | Detail |
| C1H1g21842 | 1:1,999,608-2,001,545 | - | C2H1g26621 | CX1g006895 | LOC_Os01g05120 | Os01g0144500 | - | Detail |
| C1H1g24926 | 1:2,002,105-2,004,400 | + | C2H1g18449 | CX1g006746 | LOC_Os01g05130 | Os01g0144600 | - | Detail |
| C1H1g24429 | 1:2,005,279-2,006,527 | + | C2H1g12155 | CX1g003652 | LOC_Os01g05140 | Os01g0144700 | - | Detail |
| C1H1g29078 | 1:2,011,091-2,018,192 | + | C2H1g01902 | CX1g003888 | LOC_Os01g05170 | Os01g0145000 | - | Detail |
| C1H1g11669 | 1:2,033,416-2,033,751 | + | C2H1g27857 | CX1g003888 | LOC_Os01g05180 | Os01g0145200 | - | Detail |
| C1H1g02553 | 1:2,034,378-2,036,721 | + | - | - | LOC_Os01g05180 | Os01g0145200 | - | Detail |
| C1H1g18605 | 1:2,166,440-2,170,933 | + | C2H1g08018 | CX1g000323 | LOC_Os01g05420 | Os01g0147200 | - | Detail |
| C1H1g08705 | 1:2,172,134-2,175,521 | + | C2H1g25573 | CX1g001325 | LOC_Os01g05430 | Os01g0147300 | - | Detail |
| C1H1g07217 | 1:2,175,673-2,177,602 | - | C2H1g12465 | CX1g003030 | LOC_Os01g05440 | Os01g0147400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g01356 | 1:22,547,149-22,552,418 | + | C1H1g08197 | CX1g000972 | LOC_Os01g43870 | Os01g0629400 | - | Detail |
| C2H1g12475 | 1:22,555,116-22,555,352 | + | - | - | LOC_Os01g43880 | Os01g0629500 | - | Detail |
| C2H1g02903 | 1:22,558,803-22,559,798 | + | C1H1g20267 | CX1g002102 | LOC_Os01g43890 | Os01g0629600 | - | Detail |
| C2H1g15801 | 1:22,566,740-22,567,108 | + | C1H1g20267 | CX1g002102 | LOC_Os01g43890 | Os01g0629600 | - | Detail |
| C2H1g07937 | 1:22,570,471-22,576,655 | - | C1H1g14568 | CX1g006840 | LOC_Os01g43910 | Os01g0629900 | - | Detail |
| C2H1g22336 | 1:22,609,633-22,616,484 | + | C1H1g00799 | CX1g005258 | LOC_Os01g44040 | Os01g0631100 | - | Detail |
| C2H1g25630 | 1:22,617,364-22,620,467 | + | C1H1g26941 | CX1g002535 | LOC_Os01g44050 | Os01g0631200 | - | Detail |
| C2H1g14517 | 1:22,637,435-22,643,979 | + | C1H1g05926 | CX1g001624 | LOC_Os01g44069 | Os01g0631400 | - | Detail |
| C2H1g24347 | 1:22,651,516-22,652,365 | + | C1H1g08811 | CX1g000338 | LOC_Os01g44090 | Os01g0631500 | - | Detail |
| C2H1g14152 | 1:22,675,518-22,679,990 | + | C1H1g07009 | CX1g001009 | LOC_Os01g44110 | Os01g0631700 | - | Detail |
| C2H1g16370 | 1:22,684,091-22,692,095 | + | C1H1g05320 | CX1g000935 | LOC_Os01g44130 | Os01g0631900 | - | Detail |
| C2H1g06740 | 1:22,707,438-22,709,297 | + | C1H1g12869 | - | - | - | - | Detail |
| C2H1g03548 | 1:22,722,911-22,723,426 | - | C1H1g13707 | - | LOC_Os01g44210 | Os01g0633000 | - | Detail |
| C2H1g23506 | 1:22,728,196-22,734,469 | + | C1H1g09519 | CX1g000578 | LOC_Os01g44220 | Os01g0633100 | AGPL2, OsAGPL2, osagpl2, APL2, OsAPL2, AGPiso, sh2, Sh2 | Detail |
| C2H1g25610 | 1:22,736,618-22,740,433 | + | C1H1g25629 | CX1g004196 | LOC_Os01g44230 | Os01g0633200 | - | Detail |
| C2H1g21259 | 1:22,742,692-22,745,124 | + | C1H1g17417 | CX1g001984 | LOC_Os01g44250 | Os01g0633400 | - | Detail |
| C2H1g13154 | 1:22,750,032-22,751,941 | + | C1H1g26792 | CX1g005798 | LOC_Os01g44260 | Os01g0633500 | Rd, DFR | Detail |
| C2H1g30459 | 1:22,755,586-22,762,743 | - | C1H1g26567 | CX1g002472 | LOC_Os01g44310 | Os01g0634300 | - | Detail |
| C2H1g20909 | 1:22,774,885-22,776,872 | - | C1H1g01839 | CX1g002072 | LOC_Os01g44330 | Os01g0634500 | - | Detail |
| C2H1g10174 | 1:22,778,406-22,779,964 | - | C1H1g04340 | CX1g000429 | LOC_Os01g44340 | Os01g0634600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |