| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g00597 | 1:29,442,348-29,444,656 | - | C2H1g21701 | CX1g000978 | LOC_Os01g56890 | Os01g0776700 | - | Detail |
| C1H1g11210 | 1:29,447,652-29,456,572 | + | C2H1g20224 | CX1g004792 | LOC_Os01g56910 | Os01g0777000 | - | Detail |
| C1H1g12823 | 1:29,464,686-29,469,841 | + | C2H1g02819 | CX1g004121 | LOC_Os01g56930 | Os01g0777200 | - | Detail |
| C1H1g24617 | 1:29,471,174-29,477,913 | + | C2H1g01868 | CX1g002623 | LOC_Os01g56940 | Os01g0777300 | OsEXO1 | Detail |
| C1H1g21107 | 1:29,478,388-29,480,001 | + | C2H1g09096 | CX1g005425 | LOC_Os01g56969 | Os01g0777400 | - | Detail |
| C1H1g01416 | 1:29,480,666-29,497,143 | - | C2H1g05939 | CX1g003121 | LOC_Os01g56980 | Os01g0777700 | - | Detail |
| C1H1g17868 | 1:29,500,465-29,504,032 | - | C2H1g00497 | CX1g001773 | LOC_Os01g56990 | Os01g0777800 | - | Detail |
| C1H1g03573 | 1:29,505,552-29,511,629 | + | C2H1g03254 | CX1g000485 | LOC_Os01g57020 | Os01g0778100 | - | Detail |
| C1H1g21965 | 1:29,514,322-29,514,528 | + | C2H1g02451 | - | LOC_Os01g57030 | - | - | Detail |
| C1H1g05620 | 1:29,516,277-29,516,465 | - | - | - | - | - | - | Detail |
| C1H1g29247 | 1:29,517,851-29,518,316 | - | C2H1g01479 | CX1g004182 | LOC_Os01g57050 | Os01g0778500 | - | Detail |
| C1H1g15889 | 1:29,531,797-29,538,286 | + | C2H1g17230 | CX1g000574 | LOC_Os01g57066 | Os01g0778700 | - | Detail |
| C1H1g04670 | 1:29,539,495-29,550,967 | + | C2H1g28934 | CX1g003174 | LOC_Os01g57073 | Os01g0778800 | - | Detail |
| C1H1g30175 | 1:29,551,103-29,551,342 | - | - | CX1g003472 | - | Os01g0778900 | - | Detail |
| C1H1g03962 | 1:29,556,930-29,565,462 | + | C2H1g28562 | CX1g003351 | LOC_Os01g57073 | Os01g0779100 | - | Detail |
| C1H1g22178 | 1:29,566,855-29,567,869 | + | C2H1g28562 | CX1g003351 | LOC_Os01g57082 | Os01g0779100 | - | Detail |
| C1H1g29302 | 1:29,570,592-29,572,718 | + | C2H1g25383 | CX1g005629 | LOC_Os01g57100 | Os01g0779300 | - | Detail |
| C1H1g04257 | 1:29,573,701-29,583,882 | - | C2H1g18551 | CX1g001051 | LOC_Os01g57110 | Os01g0779400 | OsCHR706, CHR706, ALT1 | Detail |
| C1H1g31795 | 1:29,592,410-29,593,249 | - | C2H5g11517 | CX1g005392 | LOC_Os01g57150 | Os01g0779800 | - | Detail |
| C1H1g30935 | 1:29,612,400-29,622,246 | + | C2H1g09740 | CX1g001431 | LOC_Os01g57210 | Os01g0780400 | OsKTN80c | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g13642 | 8:711,940-714,844 | + | C1H8g05605 | CX8g052941 | LOC_Os08g02060 | Os08g0112600 | - | Detail |
| C2H8g22255 | 8:720,440-722,292 | + | C1H8g21312 | CX8g053672 | LOC_Os08g02070 | Os08g0112700 | MADS26, OsMADS26, FDRMADS3, RMADS220 | Detail |
| C2H8g26243 | 8:721,064-724,817 | - | C1H8g17084 | CX8g052658 | LOC_Os08g02080 | Os08g0112800 | - | Detail |
| C2H8g05019 | 8:729,500-731,883 | + | C1H8g29187 | CX8g051088 | LOC_Os08g02094 | Os08g0112900 | - | Detail |
| C2H8g30079 | 8:734,786-736,230 | + | C1H8g22779 | CX8g050874 | LOC_Os08g02110 | Os08g0113000 | - | Detail |
| C2H8g13104 | 8:740,407-743,066 | + | C1H8g30630 | CX8g051694 | LOC_Os08g02120 | Os08g0113100 | - | Detail |
| C2H8g16934 | 8:743,800-752,563 | - | C1H8g06086 | CX8g052762 | LOC_Os08g02130 | Os08g0113200 | - | Detail |
| C2H8g19662 | 8:754,363-758,528 | + | C1H8g26430 | CX8g051904 | LOC_Os08g02140 | Os08g0113300 | - | Detail |
| C2H8g23828 | 8:770,019-773,119 | + | C1H8g05237 | CX8g053630 | LOC_Os08g02160 | Os08g0115800 | NAC29, OsSWN2, OsSWN2L | Detail |
| C2H8g05567 | 8:782,267-786,578 | - | C1H8g26228 | CX8g052525 | LOC_Os08g02190 | Os08g0113800 | - | Detail |
| C2H8g27966 | 8:787,558-787,902 | + | C1H8g11460 | CX8g053510 | LOC_Os08g02200 | Os08g0113900 | - | Detail |
| C2H8g16466 | 8:791,001-792,240 | + | C1H8g25755 | CX8g053819 | LOC_Os08g02210 | Os08g0114100 | OsGSE | Detail |
| C2H8g13931 | 8:800,514-802,120 | + | C1H8g24561 | CX8g050937 | LOC_Os08g02220 | Os08g0114200 | OsGH9B16 | Detail |
| C2H8g25101 | 8:808,101-810,519 | - | C1H8g30059 | CX8g054149 | LOC_Os08g02230 | Os08g0114300 | - | Detail |
| C2H8g22185 | 8:822,717-825,099 | - | C1H8g09989 | CX8g051920 | LOC_Os08g02250 | Os08g0115200 | OsIQD14 | Detail |
| C2H8g16844 | 8:867,919-869,674 | + | C1H8g24693 | CX8g050913 | LOC_Os08g02300 | Os08g0115800 | NAC29, OsSWN2, OsSWN2L | Detail |
| C2H8g16989 | 8:896,980-903,019 | - | C1H8g21370 | CX8g051286 | LOC_Os08g02330 | Os08g0116400 | - | Detail |
| C2H8g16256 | 8:908,025-909,069 | + | C1H1g28270 | CX1g004090 | - | Os09g0274025 | - | Detail |
| C2H8g30403 | 8:911,153-912,443 | + | C1H8g25166 | - | LOC_Os08g02340 | Os08g0116500 | - | Detail |
| C2H8g14914 | 8:913,413-926,951 | - | C1H8g20751 | CX8g054680 | LOC_Os08g02350 | Os08g0116566 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |