| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H8g02142 | 8:14,209,798-14,212,773 | + | C2H8g28437 | CX8g054158 | LOC_Os08g27170 | Os08g0360300 | - | Detail |
| C1H8g26175 | 8:14,268,920-14,269,845 | + | C2H8g27311 | CX8g054575 | LOC_Os08g27240 | Os08g0361000 | - | Detail |
| C1H8g19308 | 8:14,271,490-14,273,909 | + | C2H8g23103 | CX8g054575 | LOC_Os08g27240 | Os08g0451700 | - | Detail |
| C1H8g31037 | 8:14,281,466-14,283,529 | - | C2H8g08072 | CX8g050649 | LOC_Os08g27250 | Os08g0361300 | - | Detail |
| C1H8g27727 | 8:14,403,945-14,404,269 | + | - | - | - | - | - | Detail |
| C1H8g14263 | 8:14,498,527-14,498,889 | + | C2H8g05296 | CX8g052952 | - | - | - | Detail |
| C1H8g13441 | 8:14,572,406-14,587,673 | + | C2H8g25146 | CX8g051265 | - | Os08g0216000 | - | Detail |
| C1H8g25468 | 8:14,704,706-14,705,455 | + | C2H8g11102 | CX8g051414 | - | Os08g0364500 | - | Detail |
| C1H8g14593 | 8:14,717,940-14,721,790 | + | C2H8g24784 | CX8g052206 | LOC_Os08g27720 | Os08g0364900 | - | Detail |
| C1H8g03747 | 8:14,741,697-14,746,022 | - | C2H8g15559 | CX8g053810 | LOC_Os08g27780 | Os08g0365500 | - | Detail |
| C1H8g03608 | 8:14,751,352-14,764,661 | - | C2H8g08368 | CX8g053504 | LOC_Os08g27824 | Os08g0365900 | - | Detail |
| C1H8g29720 | 8:14,769,499-14,775,352 | - | C2H8g11006 | CX8g053286 | LOC_Os08g27840 | Os08g0366000 | - | Detail |
| C1H8g14013 | 8:14,776,161-14,777,290 | - | - | CX8g054074 | - | - | - | Detail |
| C1H8g18137 | 8:14,809,260-14,812,386 | + | C2H8g00441 | CX8g052983 | LOC_Os08g27850 | Os08g0366100 | - | Detail |
| C1H8g13263 | 8:14,843,995-14,844,525 | - | - | CX8g052799 | LOC_Os11g39380 | - | - | Detail |
| C1H8g28543 | 8:14,846,616-14,848,067 | - | - | CX8g051338 | LOC_Os08g28080 | Os08g0367625 | - | Detail |
| C1H8g22760 | 8:14,869,629-14,870,366 | + | C2H8g14186 | - | - | - | - | Detail |
| C1H8g29757 | 8:14,887,691-14,888,512 | + | C2H8g17116 | CX1g004622 | LOC_Os08g28990 | - | - | Detail |
| C1H8g21874 | 8:14,923,843-14,928,939 | - | C2H8g30469 | CX8g051338 | LOC_Os08g28080 | Os08g0368000 | - | Detail |
| C1H8g09688 | 8:15,014,623-15,016,753 | + | C2H8g13310 | CX8g050504 | LOC_Os11g31790 | Os01g0697250 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g12888 | 5:1,454,303-1,458,741 | + | C1H5g06409 | CX5g038529 | - | Os05g0575400 | - | Detail |
| C2H5g25220 | 5:1,466,544-1,467,068 | - | C1H5g14331 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C2H5g24745 | 5:1,471,155-1,472,263 | - | C1H5g14331 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C2H5g23667 | 5:1,478,681-1,480,492 | - | C1H5g16799 | - | - | - | - | Detail |
| C2H5g10940 | 5:1,485,921-1,486,759 | + | C1H5g11198 | CX5g037909 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| C2H5g13765 | 5:1,487,425-1,491,486 | - | C1H5g15292 | CX5g038918 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| C2H5g03241 | 5:1,493,234-1,494,460 | + | C1H3g03993 | CX5g037263 | LOC_Os12g34990 | Os03g0288300 | - | Detail |
| C2H5g20349 | 5:1,498,611-1,502,634 | + | C1H5g09306 | CX5g036768 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| C2H5g12419 | 5:1,520,537-1,521,252 | + | - | - | LOC_Os05g03960 | Os05g0130300 | - | Detail |
| C2H5g28718 | 5:1,521,612-1,529,770 | - | C1H5g31896 | CX5g040404 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| C2H5g08536 | 5:1,536,595-1,537,004 | - | C1H5g15210 | - | - | Os05g0130500 | - | Detail |
| C2H5g08634 | 5:1,538,539-1,539,316 | + | - | - | LOC_Os05g04000 | Os05g0130600 | - | Detail |
| C2H5g17204 | 5:1,541,642-1,546,148 | - | C1H5g13927 | CX5g040242 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| C2H5g23034 | 5:1,546,919-1,547,381 | + | C1H5g19982 | CX5g038388 | - | - | - | Detail |
| C2H5g10179 | 5:1,548,863-1,550,139 | + | C1H5g21167 | - | - | - | - | Detail |
| C2H5g12456 | 5:1,556,561-1,559,128 | - | C1H5g11003 | - | LOC_Os05g04070 | Os05g0131100 | - | Detail |
| C2H5g08847 | 5:1,561,924-1,566,163 | - | C1H5g23202 | - | LOC_Os05g04070 | Os05g0131401 | - | Detail |
| C2H5g12807 | 5:1,568,750-1,571,496 | - | C1H5g00064 | CX5g041042 | LOC_Os05g04120 | Os05g0131500 | - | Detail |
| C2H5g15022 | 5:1,573,614-1,581,468 | - | C1H5g06759 | CX5g037262 | - | - | - | Detail |
| C2H5g11311 | 5:1,588,305-1,591,921 | + | C1H5g22859 | CX5g040539 | LOC_Os05g04150 | Os05g0131900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |