| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H8g10093 | 8:13,076,656-13,080,334 | + | C2H8g09478 | CX8g052103 | LOC_Os08g25820 | Os08g0346500 | - | Detail |
| C1H8g17213 | 8:13,096,208-13,098,390 | - | C2H8g14625 | - | LOC_Os08g25839 | Os08g0346900 | - | Detail |
| C1H8g00829 | 8:13,106,150-13,107,204 | - | C2H8g06999 | - | LOC_Os08g25850 | Os08g0347000 | - | Detail |
| C1H8g08615 | 8:13,117,847-13,122,627 | - | C2H8g27458 | - | LOC_Os08g25860 | Os08g0351700 | - | Detail |
| C1H8g02913 | 8:13,127,372-13,127,606 | - | C2H8g20463 | - | LOC_Os08g25839 | Os08g0346900 | - | Detail |
| C1H8g14245 | 8:13,133,701-13,134,755 | - | C2H8g06999 | - | LOC_Os08g25850 | Os08g0347000 | - | Detail |
| C1H8g04458 | 8:13,156,833-13,157,149 | - | C2H8g24907 | CX8g054180 | - | - | - | Detail |
| C1H8g04474 | 8:13,167,107-13,167,889 | - | C2H8g05957 | - | LOC_Os08g25890 | Os08g0347500 | - | Detail |
| C1H8g14252 | 8:13,169,103-13,173,521 | - | C2H8g27009 | CX8g052327 | LOC_Os08g25900 | Os08g0347500 | - | Detail |
| C1H8g23113 | 8:13,176,348-13,177,399 | + | C2H8g26565 | CX8g050732 | - | Os03g0217801 | - | Detail |
| C1H8g08790 | 8:13,182,320-13,188,225 | - | C2H8g10436 | CX8g052327 | LOC_Os08g25900 | Os08g0347500 | - | Detail |
| C1H8g25903 | 8:13,192,975-13,193,315 | + | C2H8g04569 | - | LOC_Os10g32300 | Os08g0559300 | SPY, OsSPY | Detail |
| C1H8g09711 | 8:13,227,901-13,228,683 | - | C2H8g28119 | - | LOC_Os08g25990 | Os08g0353700 | - | Detail |
| C1H8g20341 | 8:13,241,362-13,241,704 | - | C2H8g30650 | CX8g052329 | LOC_Os08g26060 | - | - | Detail |
| C1H8g16060 | 8:13,261,268-13,262,645 | - | C2H8g03101 | CX8g053114 | LOC_Os08g26120 | Os08g0349300 | - | Detail |
| C1H8g02085 | 8:13,285,121-13,288,562 | + | C2H8g11771 | CX8g053987 | LOC_Os08g26180 | - | - | Detail |
| C1H8g09419 | 8:13,343,560-13,345,692 | - | C2H8g04452 | CX8g051692 | - | - | - | Detail |
| C1H8g03446 | 8:13,368,509-13,369,479 | + | C2H8g11771 | CX8g053296 | LOC_Os08g26110 | - | - | Detail |
| C1H8g07285 | 8:13,373,210-13,374,831 | - | C2H8g26155 | CX8g053114 | LOC_Os08g26120 | Os08g0349300 | - | Detail |
| C1H8g10290 | 8:13,774,082-13,776,682 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g07424 | 9:19,218,434-19,222,530 | + | C1H9g13374 | CX9g057785 | LOC_Os09g39220 | Os09g0565600 | - | Detail |
| C2H9g05946 | 9:19,224,305-19,225,510 | + | C1H9g26902 | CX9g055093 | LOC_Os09g39230 | Os09g0565700 | - | Detail |
| C2H9g19055 | 9:19,229,128-19,230,339 | + | C1H9g23958 | CX9g057620 | LOC_Os09g39260 | Os09g0566050 | - | Detail |
| C2H9g15395 | 9:19,231,647-19,237,669 | - | C1H9g25655 | CX9g056260 | LOC_Os09g39270 | Os09g0566100 | - | Detail |
| C2H9g06176 | 9:19,245,063-19,247,290 | - | C1H9g18076 | CX9g056096 | LOC_Os09g39310 | Os09g0567000 | - | Detail |
| C2H9g22038 | 9:19,251,638-19,252,552 | - | C1H9g18076 | CX9g056096 | LOC_Os09g39310 | Os09g0567000 | - | Detail |
| C2H9g09064 | 9:19,256,964-19,263,700 | - | C1H9g21987 | CX9g056096 | LOC_Os09g39320 | Os09g0566550 | - | Detail |
| C2H9g08732 | 9:19,265,273-19,266,640 | - | C1H9g31128 | CX9g056096 | LOC_Os09g39350 | Os09g0567000 | - | Detail |
| C2H9g17992 | 9:19,273,423-19,277,358 | + | C1H9g04890 | CX9g056849 | LOC_Os09g39380 | Os09g0567300 | MDHAR, OsMDHAR, OsMDAR3, OsMDHAR3 | Detail |
| C2H9g25680 | 9:19,277,859-19,280,562 | + | C1H9g13266 | CX9g058049 | LOC_Os09g39390 | Os09g0567366 | - | Detail |
| C2H9g00653 | 9:19,282,863-19,285,337 | + | C1H9g16090 | CX9g056022 | LOC_Os09g39400 | Os09g0567400 | - | Detail |
| C2H9g10548 | 9:19,289,359-19,295,560 | + | C1H9g25909 | CX9g057497 | LOC_Os09g39410 | Os09g0567500 | - | Detail |
| C2H9g15634 | 9:19,296,740-19,301,777 | + | C1H9g01897 | CX9g055257 | LOC_Os09g39420 | Os09g0567700 | - | Detail |
| C2H9g07527 | 9:19,301,792-19,305,375 | - | C1H9g27590 | CX9g058075 | LOC_Os09g39430 | Os09g0567800 | - | Detail |
| C2H9g28844 | 9:19,309,307-19,311,969 | - | C1H9g04610 | CX9g058045 | LOC_Os09g39440 | Os09g0567900 | - | Detail |
| C2H9g14034 | 9:19,314,286-19,318,425 | + | C1H9g06631 | CX9g055030 | LOC_Os09g39462 | Os09g0568000 | - | Detail |
| C2H9g07303 | 9:19,319,765-19,321,171 | + | C1H9g18800 | CX9g055723 | LOC_Os09g39474 | Os09g0568100 | - | Detail |
| C2H9g14146 | 9:19,321,995-19,323,316 | - | C1H9g25533 | CX9g055477 | LOC_Os09g39490 | Os09g0568200 | - | Detail |
| C2H9g28333 | 9:19,333,286-19,334,722 | - | C1H9g27100 | CX9g057377 | LOC_Os09g39540 | Os09g0568800 | - | Detail |
| C2H9g03364 | 9:19,334,994-19,336,916 | + | C1H9g30656 | CX9g055404 | LOC_Os09g39550 | Os09g0568900 | IF1-2, IF<sub>1</sub>-2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |