| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H8g01157 | 8:11,914,627-11,917,764 | - | C2H8g05859 | CX8g053679 | LOC_Os08g24480 | - | - | Detail |
| C1H8g06320 | 8:11,918,211-11,918,977 | - | - | CX8g053679 | - | - | - | Detail |
| C1H8g31275 | 8:11,920,084-11,924,775 | - | C2H8g00300 | CX8g053679 | LOC_Os08g24140 | Os08g0328600 | - | Detail |
| C1H8g14813 | 8:12,176,124-12,179,669 | + | C2H8g17444 | CX8g052645 | LOC_Os08g24310 | Os08g0331900 | - | Detail |
| C1H8g16650 | 8:12,287,391-12,294,370 | - | C2H8g22400 | CX8g053620 | LOC_Os08g24390 | Os08g0332700 | - | Detail |
| C1H8g15414 | 8:12,303,828-12,319,019 | + | C2H8g21705 | CX8g054497 | LOC_Os08g24420 | Os08g0332800 | - | Detail |
| C1H8g14402 | 8:12,320,007-12,322,281 | - | C2H8g30602 | CX8g052560 | LOC_Os08g24434 | Os08g0333100 | - | Detail |
| C1H8g21566 | 8:12,324,485-12,326,053 | - | C2H8g30602 | CX8g052560 | LOC_Os08g24434 | Os08g0333100 | - | Detail |
| C1H8g23254 | 8:12,428,358-12,439,257 | - | C2H8g27457 | CX8g050971 | LOC_Os08g24760 | Os08g0335000 | - | Detail |
| C1H8g14224 | 8:12,442,848-12,445,948 | + | C2H8g03021 | CX8g054409 | LOC_Os08g24770 | Os08g0335500 | - | Detail |
| C1H8g05703 | 8:12,446,628-12,450,260 | + | C2H8g16185 | CX8g054409 | LOC_Os08g24770 | Os08g0335500 | - | Detail |
| C1H8g07041 | 8:12,494,943-12,506,678 | + | C2H8g15450 | CX8g051028 | LOC_Os08g24880 | Os08g0336500 | - | Detail |
| C1H8g08186 | 8:12,513,974-12,516,051 | + | - | - | - | - | - | Detail |
| C1H8g26190 | 8:12,549,685-12,564,647 | + | C2H8g02378 | CX8g053127 | LOC_Os08g24930 | Os08g0337001 | - | Detail |
| C1H8g12852 | 8:12,569,723-12,583,157 | + | C2H8g02262 | CX8g052819 | LOC_Os08g24946 | Os08g0337300 | - | Detail |
| C1H8g26453 | 8:12,592,995-12,596,350 | - | C2H8g27545 | CX8g052100 | LOC_Os08g25010 | Os08g0337700 | - | Detail |
| C1H8g26827 | 8:12,651,098-12,652,608 | + | C2H8g28245 | CX8g053842 | LOC_Os08g25030 | Os08g0337800 | - | Detail |
| C1H8g07649 | 8:12,666,252-12,667,752 | + | C2H8g03984 | CX8g054203 | LOC_Os08g25030 | Os08g0337800 | - | Detail |
| C1H8g10734 | 8:12,669,557-12,670,508 | - | C2H8g00918 | CX8g053958 | LOC_Os08g25050 | Os08g0338000 | - | Detail |
| C1H8g12007 | 8:12,675,639-12,684,483 | - | C2H8g21137 | CX8g052387 | LOC_Os08g25060 | Os08g0338200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g14207 | 3:133,794-134,079 | - | - | CX3g030057 | - | Os03g0102000 | - | Detail |
| C2H3g00981 | 3:133,870-138,264 | + | C1H3g25020 | CX3g027602 | LOC_Os03g01230 | Os03g0102200 | - | Detail |
| C2H3g16038 | 3:142,600-153,389 | + | C1H3g05989 | CX3g029938 | LOC_Os03g01240 | Os03g0102300 | - | Detail |
| C2H3g07325 | 3:155,037-159,615 | + | C1H3g05608 | CX3g029938 | LOC_Os03g01240 | Os03g0102366 | - | Detail |
| C2H3g23495 | 3:159,429-164,729 | - | C1H3g25301 | CX3g027923 | LOC_Os03g01250 | Os03g0102400 | - | Detail |
| C2H3g09146 | 3:168,302-169,141 | - | C1H3g20737 | CX3g028399 | LOC_Os03g01260 | Os03g0102500 | - | Detail |
| C2H3g19463 | 3:174,039-175,541 | + | C1H3g18000 | CX3g030913 | LOC_Os03g01270 | Os03g0102700 | OsEXPB7 | Detail |
| C2H3g08091 | 3:184,712-188,564 | + | C1H3g03491 | CX3g027138 | LOC_Os03g01290 | Os03g0103000 | - | Detail |
| C2H3g23946 | 3:189,670-191,920 | + | - | - | - | - | - | Detail |
| C2H3g24645 | 3:196,980-197,405 | + | C1H3g01568 | CX3g025864 | LOC_Os03g01300 | Os03g0103100 | - | Detail |
| C2H3g00230 | 3:199,926-200,357 | + | C1H3g01568 | CX3g025864 | LOC_Os03g01300 | Os03g0103200 | - | Detail |
| C2H3g27129 | 3:208,983-209,564 | + | C1H3g18184 | CX3g025864 | LOC_Os03g01320 | Os03g0103300 | qLTG-3-1(t), qLTG-3-1(t), qLTG3-1, OsHyPRP05, OsHyPRP5, HyP/GRP05, HyP/GRP5 | Detail |
| C2H3g00666 | 3:218,224-219,759 | + | C1H3g24558 | CX3g025803 | - | Os03g0103400 | - | Detail |
| C2H3g07381 | 3:229,277-231,060 | + | C1H3g28077 | CX3g025211 | LOC_Os03g01530 | Os03g0105600 | - | Detail |
| C2H3g12984 | 3:233,719-235,979 | - | C1H3g23454 | CX3g026334 | LOC_Os03g01540 | Os03g0105700 | OsAHL6 | Detail |
| C2H3g00326 | 3:237,525-241,430 | - | C1H3g02722 | CX3g030126 | LOC_Os03g01550 | Os03g0105800 | - | Detail |
| C2H3g00355 | 3:244,970-247,830 | - | C1H3g03839 | CX3g030694 | LOC_Os03g01570 | Os03g0106000 | - | Detail |
| C2H3g00823 | 3:249,623-254,908 | - | C1H3g18280 | CX3g029689 | LOC_Os03g01580 | Os03g0106200 | - | Detail |
| C2H3g10053 | 3:258,131-262,210 | - | C1H3g03593 | CX3g031070 | LOC_Os03g01590 | Os03g0106300 | PAIR1, Pair1 | Detail |
| C2H3g14376 | 3:262,800-267,287 | - | C1H3g13137 | CX3g025678 | LOC_Os03g01600 | Os03g0106400 | OsBCAT1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |