| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g19018 | 1:29,090,278-29,091,468 | - | C2H1g22698 | CX1g002914 | LOC_Os01g56390 | Os01g0770400 | - | Detail |
| C1H1g17741 | 1:29,093,609-29,096,832 | - | C2H1g05759 | CX1g002914 | LOC_Os01g56400 | Os01g0770500 | - | Detail |
| C1H1g14879 | 1:29,098,523-29,098,999 | + | - | CX1g005473 | LOC_Os01g56420 | Os01g0770700 | OsCOPT1 | Detail |
| C1H1g21445 | 1:29,100,961-29,101,569 | + | - | CX1g004170 | LOC_Os01g56430 | Os01g0770800 | - | Detail |
| C1H1g27537 | 1:29,107,839-29,108,522 | - | C2H1g05454 | CX1g006911 | LOC_Os01g56450 | Os01g0771000 | - | Detail |
| C1H1g10943 | 1:29,119,689-29,121,938 | - | C2H1g02164 | CX1g002609 | LOC_Os01g56460 | Os01g0771100 | - | Detail |
| C1H1g21728 | 1:29,124,702-29,126,222 | + | C2H1g21925 | CX1g002494 | LOC_Os01g56470 | Os01g0771200 | XB24 | Detail |
| C1H1g23479 | 1:29,132,384-29,149,128 | - | C2H1g08277 | CX1g002023 | LOC_Os01g56490 | Os01g0771400 | - | Detail |
| C1H1g09719 | 1:29,158,874-29,164,327 | - | C2H1g09013 | CX1g003064 | LOC_Os01g56510 | Os01g0771900 | - | Detail |
| C1H1g15587 | 1:29,164,785-29,170,094 | - | C2H1g10326 | CX1g004890 | LOC_Os01g56520 | Os01g0772000 | OsDRB6 | Detail |
| C1H1g16550 | 1:29,172,353-29,173,274 | - | C2H1g20436 | CX1g004076 | LOC_Os01g56530 | Os01g0772100 | - | Detail |
| C1H1g10415 | 1:29,173,956-29,176,636 | - | C2H1g23179 | CX1g002201 | LOC_Os01g56540 | Os01g0772150 | - | Detail |
| C1H1g16286 | 1:29,177,442-29,181,060 | - | C2H1g01361 | CX1g006273 | LOC_Os01g56550 | Os01g0772200 | - | Detail |
| C1H1g24646 | 1:29,187,488-29,189,981 | + | C2H1g16043 | CX1g001770 | LOC_Os01g56560 | Os01g0772400 | - | Detail |
| C1H1g22554 | 1:29,190,636-29,192,070 | - | C2H1g11972 | CX1g000006 | LOC_Os01g56570 | Os01g0772500 | - | Detail |
| C1H1g31413 | 1:29,198,339-29,205,533 | + | C2H1g14754 | CX1g003746 | LOC_Os01g56580 | Os01g0772600 | - | Detail |
| C1H1g02674 | 1:29,206,792-29,230,045 | + | C2H1g21696 | CX1g007111 | LOC_Os01g56590 | Os01g0772700 | - | Detail |
| C1H1g01600 | 1:29,234,513-29,238,555 | + | C2H1g02753 | CX1g000007 | LOC_Os01g56600 | Os01g0772800 | - | Detail |
| C1H1g07828 | 1:29,238,841-29,239,050 | - | C2H1g15956 | CX1g003614 | LOC_Os01g56610 | Os01g0772900 | - | Detail |
| C1H1g01596 | 1:29,239,140-29,240,680 | - | C2H1g15956 | CX1g003614 | LOC_Os01g56610 | Os01g0772900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g12947 | 2:24,233,161-24,234,705 | + | C1H2g17222 | CX2g024545 | LOC_Os02g43150 | Os02g0645600 | - | Detail |
| C2H2g06445 | 2:24,233,462-24,234,668 | - | - | - | - | - | - | Detail |
| C2H2g19622 | 2:24,259,273-24,260,767 | + | C1H2g19085 | CX2g024814 | LOC_Os02g43170 | Os02g0646200 | - | Detail |
| C2H2g11300 | 2:24,263,567-24,265,648 | + | C1H2g22786 | CX2g024271 | LOC_Os02g43180 | Os02g0646400 | - | Detail |
| C2H2g09061 | 2:24,266,639-24,273,222 | - | C1H2g07582 | CX2g020293 | LOC_Os02g43194 | Os02g0646500 | - | Detail |
| C2H2g19522 | 2:24,279,488-24,279,739 | + | - | CX1g001923 | - | - | - | Detail |
| C2H2g08863 | 2:24,284,183-24,286,281 | + | - | - | - | - | - | Detail |
| C2H2g25954 | 2:24,286,941-24,288,260 | - | C1H2g22254 | CX2g019582 | LOC_Os02g43250 | Os02g0647300 | - | Detail |
| C2H2g12985 | 2:24,301,822-24,307,280 | + | C1H2g05654 | CX2g024426 | LOC_Os02g43280 | Os02g0647900 | - | Detail |
| C2H2g29445 | 2:24,313,328-24,314,531 | - | C1H2g13691 | CX2g021973 | LOC_Os02g43290 | Os02g0648100 | - | Detail |
| C2H2g03827 | 2:24,330,368-24,333,423 | - | C1H2g15207 | CX2g020713 | LOC_Os02g43300 | Os02g0648300 | - | Detail |
| C2H2g24370 | 2:24,363,625-24,364,119 | - | - | - | - | - | - | Detail |
| C2H2g11895 | 2:24,372,313-24,373,186 | + | C1H2g25916 | CX2g019169 | LOC_Os02g43330 | Os02g0649300 | HOX24, Oshox24, OsHox24, OsSLI1 | Detail |
| C2H2g11536 | 2:24,376,090-24,380,365 | - | C1H2g29202 | CX2g021953 | LOC_Os02g43340 | Os02g0649400 | - | Detail |
| C2H2g22971 | 2:24,381,650-24,382,018 | + | - | CX2g020014 | - | - | - | Detail |
| C2H2g04607 | 2:24,383,987-24,390,208 | + | C1H2g22654 | CX2g021451 | LOC_Os02g43350 | Os02g0649700 | - | Detail |
| C2H2g04813 | 2:24,391,339-24,392,027 | - | C1H2g29127 | CX2g024526 | LOC_Os02g43360 | Os02g0649800 | - | Detail |
| C2H2g23002 | 2:24,396,962-24,400,823 | - | C1H2g17207 | CX2g022915 | LOC_Os02g43370 | Os02g0649900 | YSL2, OsYSL2, Os-YSL2, OsYs6 | Detail |
| C2H2g12264 | 2:24,406,147-24,409,852 | - | C1H2g09379 | CX2g019779 | LOC_Os02g43410 | Os02g0650300 | - | Detail |
| C2H2g21909 | 2:24,420,946-24,421,182 | + | - | CX2g022293 | LOC_Os02g43420 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |