| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H8g09107 | 8:8,549,512-8,550,195 | + | C2H8g09592 | CX8g053613 | LOC_Os08g17160 | Os08g0137900 | - | Detail |
| C1H8g12395 | 8:8,566,965-8,571,765 | + | C2H8g01986 | CX8g053428 | LOC_Os08g17294 | Os08g0274700 | - | Detail |
| C1H8g30588 | 8:8,586,476-8,588,386 | + | C2H8g12330 | CX8g051879 | LOC_Os08g17320 | Os08g0275200 | - | Detail |
| C1H8g08805 | 8:8,600,923-8,602,117 | + | - | - | - | - | - | Detail |
| C1H8g05890 | 8:8,625,354-8,626,420 | - | C2H8g20627 | - | - | - | - | Detail |
| C1H8g01808 | 8:8,627,547-8,628,392 | - | C2H8g25295 | CX8g051567 | LOC_Os08g17370 | Os08g0554900 | - | Detail |
| C1H8g11709 | 8:8,628,813-8,634,762 | - | C2H8g13582 | CX8g051413 | LOC_Os10g40240 | Os08g0555300 | - | Detail |
| C1H8g02486 | 8:8,639,801-8,643,090 | + | C2H8g13091 | CX8g054511 | LOC_Os08g17390 | Os08g0276100 | - | Detail |
| C1H8g11415 | 8:8,647,216-8,648,888 | - | C2H8g00262 | CX8g052607 | LOC_Os08g17400 | Os08g0276200 | OsWRKY82, OsWRKY89 | Detail |
| C1H8g25819 | 8:8,660,940-8,663,423 | - | C2H8g07146 | CX8g052963 | LOC_Os08g17410 | Os08g0276400 | - | Detail |
| C1H8g30230 | 8:8,706,205-8,708,009 | + | C2H8g18247 | CX8g052824 | LOC_Os08g17500 | Os08g0277200 | - | Detail |
| C1H8g12492 | 8:8,710,738-8,712,690 | - | C2H8g15572 | CX8g053884 | LOC_Os08g17510 | Os08g0277300 | - | Detail |
| C1H8g19387 | 8:8,714,517-8,715,195 | - | C2H8g01484 | CX8g053884 | LOC_Os08g17520 | Os08g0277300 | - | Detail |
| C1H8g12288 | 8:8,735,225-8,736,325 | - | C2H8g25980 | CX8g054639 | - | - | - | Detail |
| C1H8g19696 | 8:8,741,122-8,743,289 | + | C2H8g07608 | CX8g050897 | LOC_Os08g17600 | Os08g0277900 | - | Detail |
| C1H8g09444 | 8:8,748,474-8,752,036 | + | C2H8g03413 | CX8g053477 | LOC_Os08g17610 | Os08g0278100 | - | Detail |
| C1H8g01743 | 8:8,795,558-8,798,416 | - | C2H8g20942 | CX8g053903 | LOC_Os08g17680 | Os08g0278900 | OsSDF2-1 | Detail |
| C1H8g18197 | 8:8,809,513-8,812,167 | + | C2H8g29080 | CX8g054724 | LOC_Os08g34480 | Os08g0278966 | - | Detail |
| C1H8g17859 | 8:8,836,482-8,839,251 | - | C2H8g13089 | CX8g052196 | LOC_Os08g17760 | Os08g0458600 | - | Detail |
| C1H8g19458 | 8:8,839,361-8,840,943 | - | C2H8g28640 | CX8g052196 | LOC_Os08g17760 | Os08g0458600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g16716 | 4:29,196,574-29,202,704 | + | C1H4g13098 | CX4g034339 | LOC_Os04g56720 | Os04g0662800 | - | Detail |
| C2H4g14267 | 4:29,203,420-29,205,381 | - | C1H4g29894 | CX4g033445 | LOC_Os04g56730 | Os04g0662900 | - | Detail |
| C2H4g26679 | 4:29,222,202-29,228,139 | + | C1H4g08308 | CX4g032535 | LOC_Os04g56740 | Os04g0663100 | - | Detail |
| C2H4g19453 | 4:29,231,603-29,237,104 | - | C1H4g00285 | CX4g033028 | LOC_Os04g56750 | Os04g0663200 | - | Detail |
| C2H4g17808 | 4:29,238,059-29,238,391 | - | C1H5g05278 | CX4g031937 | LOC_Os04g56760 | Os04g0663300 | OsPHF5A1 | Detail |
| C2H4g23478 | 4:29,239,673-29,239,927 | + | C1H4g10605 | CX4g034501 | - | - | - | Detail |
| C2H4g29870 | 4:29,239,978-29,243,354 | + | C1H4g18316 | CX4g032009 | LOC_Os04g56770 | Os04g0663500 | - | Detail |
| C2H4g27682 | 4:29,244,197-29,245,269 | - | C1H4g08413 | CX4g035961 | LOC_Os04g56780 | Os04g0663600 | WOX1, Os WUS, WUS, OsWOX1, OsWUS, TAB1, TAB1/WUS, MOC3, MOC3/OsWUS | Detail |
| C2H4g25028 | 4:29,253,233-29,260,212 | - | C1H4g06808 | CX4g034853 | LOC_Os04g56790 | Os04g0663700 | - | Detail |
| C2H4g24912 | 4:29,262,184-29,262,843 | + | - | CX4g036037 | LOC_Os04g56820 | - | - | Detail |
| C2H4g18884 | 4:29,265,411-29,265,767 | + | - | CX4g035877 | - | - | - | Detail |
| C2H4g26604 | 4:29,266,394-29,267,548 | - | - | - | - | - | - | Detail |
| C2H4g20102 | 4:29,268,657-29,274,641 | - | C1H4g18422 | CX4g033249 | LOC_Os04g56850 | Os04g0664400 | OsARF11, OsMP | Detail |
| C2H4g00899 | 4:29,296,008-29,297,348 | + | C1H4g27904 | CX4g034957 | LOC_Os04g56900 | Os04g0664500 | OsAHT1 | Detail |
| C2H4g19479 | 4:29,299,350-29,300,699 | - | C1H4g27904 | CX4g035701 | LOC_Os04g56910 | Os04g0664600 | OsAHT2 | Detail |
| C2H4g29529 | 4:29,307,857-29,308,045 | - | C1H4g28826 | CX4g036377 | LOC_Os04g56920 | Os04g0664800 | - | Detail |
| C2H4g12473 | 4:29,308,394-29,310,189 | - | C1H4g28826 | CX4g036377 | LOC_Os04g56920 | Os04g0664800 | - | Detail |
| C2H4g26922 | 4:29,310,977-29,313,340 | - | C1H4g05011 | CX4g036377 | LOC_Os04g56930 | Os04g0664900 | - | Detail |
| C2H4g09681 | 4:29,314,042-29,316,157 | + | C1H4g08334 | CX4g034395 | - | Os04g0665000 | - | Detail |
| C2H4g19734 | 4:29,317,030-29,318,991 | - | C1H4g02808 | CX4g035345 | LOC_Os04g56950 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |