| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H8g11050 | 8:5,056,294-5,059,489 | + | C2H8g10424 | CX8g052246 | - | - | - | Detail |
| C1H8g23352 | 8:5,066,272-5,071,927 | + | C2H8g21637 | CX8g051846 | LOC_Os08g10250 | Os08g0203400 | - | Detail |
| C1H8g12258 | 8:5,074,001-5,074,589 | + | C2H8g21637 | CX8g051846 | LOC_Os08g10150 | Os08g0201700 | - | Detail |
| C1H8g26659 | 8:5,086,645-5,103,021 | - | C2H8g24374 | CX8g051622 | LOC_Os08g10290 | Os08g0203400 | - | Detail |
| C1H8g03659 | 8:5,143,615-5,146,238 | + | C2H8g21637 | CX8g051846 | LOC_Os08g10150 | Os08g0203400 | - | Detail |
| C1H8g04323 | 8:5,153,763-5,155,319 | + | C2H8g18431 | CX8g051622 | LOC_Os08g10290 | Os08g0203300 | - | Detail |
| C1H8g00219 | 8:5,155,392-5,161,389 | + | C2H8g24374 | CX8g052512 | LOC_Os08g10290 | Os08g0203201 | - | Detail |
| C1H8g25219 | 8:5,166,511-5,173,737 | + | C2H8g27160 | CX8g052512 | LOC_Os08g10300 | Os08g0203300 | - | Detail |
| C1H8g01055 | 8:5,184,396-5,191,299 | + | C2H8g24374 | CX8g052512 | LOC_Os08g10310 | Os08g0203400 | - | Detail |
| C1H8g08938 | 8:5,200,316-5,207,044 | + | C2H8g20847 | CX8g052512 | LOC_Os08g10320 | Os08g0203600 | - | Detail |
| C1H8g17499 | 8:5,208,897-5,216,696 | + | C2H8g24374 | CX8g052512 | LOC_Os08g10330 | Os08g0203700 | - | Detail |
| C1H8g15423 | 8:5,219,860-5,221,266 | + | C2H8g13356 | CX8g052422 | LOC_Os08g10340 | Os08g0203800 | - | Detail |
| C1H8g07848 | 8:5,227,137-5,228,165 | - | C2H8g08736 | CX8g050435 | LOC_Os08g10350 | Os08g0203900 | - | Detail |
| C1H8g16239 | 8:5,231,749-5,232,759 | - | - | CX5g037020 | - | - | - | Detail |
| C1H8g07810 | 8:5,254,862-5,257,895 | - | C2H8g27868 | CX8g051557 | LOC_Os08g10410 | Os08g0204800 | - | Detail |
| C1H8g04519 | 8:5,265,993-5,270,130 | + | C2H4g00337 | CX8g054379 | - | Os08g0367300 | - | Detail |
| C1H8g06266 | 8:5,272,617-5,274,391 | - | C2H8g28097 | CX8g053258 | LOC_Os08g10420 | Os08g0205000 | - | Detail |
| C1H8g11728 | 8:5,278,094-5,281,447 | + | C2H8g28943 | CX8g054174 | LOC_Os08g10440 | Os08g0205150 | OsPi304 | Detail |
| C1H8g02014 | 8:5,288,241-5,290,353 | + | C2H8g28943 | CX8g054503 | LOC_Os08g10440 | Os08g0205150 | OsPi304 | Detail |
| C1H8g17065 | 8:5,290,833-5,292,292 | - | - | - | - | Os08g0205125 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g20617 | 3:29,621,352-29,624,320 | - | C1H3g23563 | CX3g025581 | LOC_Os03g56790 | Os03g0780400 | OsADF2 | Detail |
| C2H3g18001 | 3:29,626,391-29,631,401 | + | C1H3g23600 | CX3g026219 | LOC_Os03g56800 | Os03g0780500 | - | Detail |
| C2H3g14864 | 3:29,631,995-29,635,002 | + | C1H3g17595 | CX3g030860 | LOC_Os03g56810 | Os03g0780600 | - | Detail |
| C2H3g09626 | 3:29,635,110-29,639,573 | + | - | - | - | - | - | Detail |
| C2H3g16433 | 3:29,641,852-29,643,226 | + | C1H3g26439 | CX3g026170 | LOC_Os03g56820 | Os03g0780800 | - | Detail |
| C2H3g03306 | 3:29,644,727-29,647,250 | - | C1H3g14922 | CX3g028624 | LOC_Os03g56830 | Os03g0780900 | - | Detail |
| C2H3g10423 | 3:29,649,468-29,652,876 | - | C1H3g04528 | CX3g030035 | LOC_Os03g56840 | Os03g0781000 | - | Detail |
| C2H3g00662 | 3:29,654,033-29,656,588 | + | C1H3g00697 | CX3g028006 | LOC_Os03g56850 | Os03g0781100 | - | Detail |
| C2H3g16006 | 3:29,658,702-29,659,389 | - | C1H3g00675 | CX3g031346 | LOC_Os03g56860 | Os03g0781300 | - | Detail |
| C2H3g09130 | 3:29,660,283-29,662,126 | - | C1H3g13066 | CX3g029784 | LOC_Os03g56869 | Os03g0781400 | - | Detail |
| C2H3g00286 | 3:29,664,701-29,668,083 | - | C1H3g04826 | CX3g025012 | LOC_Os03g56890 | Os03g0781600 | - | Detail |
| C2H3g19846 | 3:29,687,604-29,690,478 | + | C1H3g18147 | CX3g026212 | LOC_Os03g56950 | Os03g0782500 | PIL13, OsPIL1, OsPIL13, OsbHLH152 | Detail |
| C2H3g26278 | 3:29,697,094-29,699,728 | - | C1H3g10536 | CX3g026808 | LOC_Os03g56960 | Os03g0782900 | - | Detail |
| C2H3g17813 | 3:29,699,849-29,705,182 | + | C1H3g29435 | CX3g030659 | LOC_Os03g56970 | Os03g0783000 | - | Detail |
| C2H3g21267 | 3:29,717,486-29,720,085 | + | C1H3g09935 | - | LOC_Os03g56490 | Os03g0783100 | - | Detail |
| C2H3g27771 | 3:29,721,321-29,721,893 | + | C1H3g22666 | - | LOC_Os03g57010 | Os03g0783100 | - | Detail |
| C2H3g11026 | 3:29,763,753-29,765,490 | - | C1H3g16399 | CX3g026130 | LOC_Os03g57040 | Os03g0783700 | - | Detail |
| C2H3g20647 | 3:29,771,887-29,775,333 | + | C1H3g28995 | CX3g025168 | LOC_Os03g57070 | Os03g0784000 | - | Detail |
| C2H3g12289 | 3:29,780,651-29,782,256 | - | C1H3g19825 | CX3g027646 | LOC_Os03g57080 | Os03g0784100 | - | Detail |
| C2H3g18782 | 3:29,791,176-29,793,796 | - | C1H3g16412 | - | LOC_Os03g57090 | Os03g0784300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |