| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H8g03393 | 8:3,397,322-3,399,539 | - | C2H8g17452 | CX8g054750 | LOC_Os08g07380 | Os08g0170700 | - | Detail |
| C1H8g26773 | 8:3,413,624-3,419,760 | - | C2H8g23483 | CX8g051685 | LOC_Os08g07380 | Os08g0170700 | - | Detail |
| C1H8g22781 | 8:3,427,231-3,429,281 | - | - | - | - | - | - | Detail |
| C1H8g09517 | 8:3,434,407-3,439,290 | - | C2H8g29864 | CX8g053028 | LOC_Os08g07390 | Os08g0170800 | - | Detail |
| C1H8g22551 | 8:3,440,803-3,444,602 | - | C2H8g27296 | CX8g053981 | LOC_Os08g07400 | Os08g0170900 | - | Detail |
| C1H8g05124 | 8:3,446,497-3,449,993 | + | C2H8g03784 | CX8g054217 | LOC_Os08g07430 | Os08g0171000 | - | Detail |
| C1H8g21871 | 8:3,450,490-3,452,698 | - | C2H8g18318 | CX8g054198 | LOC_Os08g07440 | Os08g0171100 | - | Detail |
| C1H8g03921 | 8:3,452,895-3,457,341 | + | C2H8g06491 | CX8g053392 | LOC_Os10g18220 | Os10g0329300 | - | Detail |
| C1H8g26113 | 8:3,466,897-3,475,405 | - | C2H8g16585 | CX8g051451 | LOC_Os08g07480 | Os08g0171600 | - | Detail |
| C1H8g06462 | 8:3,485,550-3,486,500 | - | C2H8g22605 | CX8g051023 | LOC_Os08g07490 | Os08g0171700 | - | Detail |
| C1H8g31155 | 8:3,491,057-3,492,133 | - | C2H8g04634 | CX8g054430 | LOC_Os08g07500 | Os08g0171800 | - | Detail |
| C1H8g30890 | 8:3,516,632-3,522,272 | + | C2H8g18305 | CX8g053813 | LOC_Os08g07540 | Os08g0172200 | - | Detail |
| C1H8g02153 | 8:3,544,786-3,545,049 | + | - | CX8g054523 | LOC_Os08g07600 | Os08g0172800 | - | Detail |
| C1H8g23329 | 8:3,552,796-3,553,316 | + | - | CX8g054603 | LOC_Os08g07640 | Os08g0173300 | OsPROPEP3 | Detail |
| C1H8g10489 | 8:3,555,500-3,556,042 | + | - | CX8g054418 | LOC_Os08g07660 | Os08g0173300 | OsPROPEP3 | Detail |
| C1H8g29637 | 8:3,558,118-3,558,750 | + | - | CX8g051342 | LOC_Os08g07660 | Os08g0173300 | OsPROPEP3 | Detail |
| C1H8g00075 | 8:3,568,869-3,569,459 | + | C2H8g28564 | CX8g051401 | LOC_Os08g07690 | Os08g0173600 | - | Detail |
| C1H8g09003 | 8:3,570,843-3,571,403 | - | C2H8g28929 | CX8g054748 | LOC_Os08g07700 | Os08g0173700 | - | Detail |
| C1H8g31858 | 8:3,584,582-3,586,853 | - | C2H8g04426 | CX8g054024 | LOC_Os08g07720 | Os08g0174100 | - | Detail |
| C1H8g15992 | 8:3,591,942-3,595,465 | + | C2H8g16815 | CX8g053484 | LOC_Os08g07730 | Os08g0174300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g06770 | 2:9,086,090-9,092,576 | - | C1H2g04839 | CX2g020121 | LOC_Os02g17460 | Os02g0274600 | - | Detail |
| C2H2g25557 | 2:9,094,416-9,095,481 | + | C1H2g13080 | - | - | - | - | Detail |
| C2H2g12255 | 2:9,097,550-9,100,200 | + | C1H2g13080 | CX2g019862 | LOC_Os02g17470 | Os02g0274700 | - | Detail |
| C2H2g07148 | 2:9,111,459-9,118,310 | + | C1H2g20851 | CX2g020679 | LOC_Os02g17500 | Os02g0274900 | - | Detail |
| C2H2g16988 | 2:9,123,672-9,124,927 | + | C1H2g27766 | CX2g021332 | LOC_Os02g17520 | Os02g0275100 | - | Detail |
| C2H2g25493 | 2:9,125,762-9,131,981 | - | C1H2g18414 | CX2g022654 | LOC_Os02g17534 | Os02g0275200 | - | Detail |
| C2H2g12406 | 2:9,138,853-9,140,072 | + | C1H2g18414 | CX2g022654 | LOC_Os02g17590 | - | - | Detail |
| C2H2g19414 | 2:9,144,370-9,146,293 | + | C1H2g18414 | CX2g022452 | LOC_Os02g17534 | Os02g0275200 | - | Detail |
| C2H2g11418 | 2:9,153,298-9,161,883 | - | C1H2g28570 | CX2g024094 | LOC_Os02g17620 | Os02g0276200 | - | Detail |
| C2H2g13253 | 2:9,188,438-9,191,184 | - | C1H2g09318 | CX2g019729 | LOC_Os02g17640 | Os02g0276400 | - | Detail |
| C2H2g02640 | 2:9,192,146-9,200,452 | - | C1H2g06211 | CX2g023106 | LOC_Os02g17650 | Os02g0276500 | OsVTE1 | Detail |
| C2H2g17601 | 2:9,224,532-9,226,293 | - | - | - | - | - | - | Detail |
| C2H2g21214 | 2:9,227,200-9,234,095 | - | C1H2g04949 | CX2g020993 | LOC_Os02g17680 | Os02g0276900 | - | Detail |
| C2H2g16961 | 2:9,244,502-9,246,511 | - | - | - | - | - | - | Detail |
| C2H2g07248 | 2:9,245,242-9,247,742 | + | C1H2g26261 | CX2g020060 | LOC_Os11g06800 | Os02g0231600 | - | Detail |
| C2H2g23233 | 2:9,251,488-9,256,684 | + | C1H2g06748 | CX2g023495 | LOC_Os02g17700 | Os02g0277600 | - | Detail |
| C2H2g21422 | 2:9,257,574-9,260,172 | - | C1H2g21417 | CX2g019451 | LOC_Os02g17710 | Os02g0277700 | - | Detail |
| C2H2g09294 | 2:9,267,786-9,272,819 | + | C1H2g04601 | CX2g022207 | LOC_Os02g17760 | Os02g0278400 | - | Detail |
| C2H2g18932 | 2:9,270,435-9,271,883 | - | - | - | - | Os02g0278450 | - | Detail |
| C2H2g03135 | 2:9,276,565-9,287,809 | - | C1H2g04831 | CX2g024821 | LOC_Os02g17780 | Os02g0278700 | OsCPS1, OsCPS1<sub>ent</sub> | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |