| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g00612 | 7:25,070,302-25,074,585 | - | C2H7g27700 | CX7g048957 | LOC_Os07g49030 | Os07g0690300 | - | Detail |
| C1H7g03649 | 7:25,079,761-25,083,211 | + | C2H7g23297 | CX7g049955 | LOC_Os07g49040 | Os07g0690400 | - | Detail |
| C1H7g22752 | 7:25,083,302-25,084,453 | - | C2H7g26125 | CX7g049939 | LOC_Os07g49050 | Os07g0690600 | - | Detail |
| C1H7g03170 | 7:25,085,260-25,087,284 | - | C2H7g04451 | CX7g046125 | LOC_Os07g49080 | Os07g0690900 | OsBC1L8 | Detail |
| C1H7g15930 | 7:25,089,520-25,091,318 | + | C2H7g13976 | CX7g049945 | LOC_Os07g49100 | Os07g0691100 | - | Detail |
| C1H7g28726 | 7:25,094,844-25,104,087 | + | C2H7g11373 | CX7g048286 | LOC_Os07g49110 | Os07g0691200 | - | Detail |
| C1H7g03930 | 7:25,105,343-25,106,040 | + | C2H3g09178 | CX7g046898 | LOC_Os07g49114 | Os07g0691300 | - | Detail |
| C1H7g06988 | 7:25,115,327-25,116,416 | - | C2H7g15372 | CX7g046808 | LOC_Os07g49120 | Os07g0691600 | - | Detail |
| C1H7g25025 | 7:25,128,073-25,132,400 | + | C2H7g24421 | CX7g047543 | LOC_Os07g49140 | Os07g0691700 | - | Detail |
| C1H7g11973 | 7:25,132,670-25,136,911 | - | C2H7g10677 | CX7g046775 | LOC_Os07g49150 | Os07g0691800 | - | Detail |
| C1H7g30038 | 7:25,139,228-25,139,903 | - | C2H7g25839 | CX7g049604 | LOC_Os07g49200 | Os07g0692200 | - | Detail |
| C1H7g13221 | 7:25,144,607-25,146,049 | + | C2H7g03062 | CX7g047457 | LOC_Os07g49210 | Os07g0692401 | - | Detail |
| C1H7g15140 | 7:25,147,549-25,154,248 | + | C2H7g15701 | CX7g048386 | LOC_Os07g49210 | Os07g0692600 | CLSY1 | Detail |
| C1H7g20586 | 7:25,155,036-25,157,343 | - | C2H7g00427 | CX7g048032 | LOC_Os07g49220 | Os07g0692800 | - | Detail |
| C1H7g14766 | 7:25,157,520-25,162,397 | + | C2H7g11098 | CX7g049536 | LOC_Os07g49230 | Os07g0692900 | - | Detail |
| C1H7g14039 | 7:25,163,364-25,166,224 | + | C2H7g23736 | CX7g047523 | LOC_Os07g49240 | Os07g0693000 | - | Detail |
| C1H7g14309 | 7:25,169,090-25,170,841 | + | C2H7g19394 | CX3g027341 | LOC_Os07g49250 | Os07g0693100 | - | Detail |
| C1H7g06031 | 7:25,174,085-25,174,459 | + | - | - | - | - | - | Detail |
| C1H7g07225 | 7:25,177,183-25,183,325 | + | C2H5g03493 | CX5g037750 | LOC_Os07g44670 | Os07g0190600 | - | Detail |
| C1H7g17939 | 7:25,184,673-25,193,674 | + | C2H3g00182 | CX7g046616 | LOC_Os07g49260 | Os07g0693400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g17957 | 12:19,825,339-19,828,955 | - | - | - | - | - | - | Detail |
| C2H12g00857 | 12:19,836,424-19,839,405 | - | C1H12g12899 | CX12g015511 | LOC_Os12g38730 | Os12g0576300 | - | Detail |
| C2H12g17120 | 12:19,843,002-19,846,719 | - | C1H12g10259 | CX12g016341 | LOC_Os12g38750 | Os12g0576600 | - | Detail |
| C2H12g04894 | 12:19,854,539-19,857,748 | - | C1H12g21793 | CX12g017028 | LOC_Os12g38760 | Os12g0576700 | - | Detail |
| C2H12g26878 | 12:19,862,311-19,865,959 | - | C1H12g30700 | CX12g016600 | LOC_Os12g38770 | Os12g0576750 | PAP1B, OsPAP1b, NPP2, OsNPP2 | Detail |
| C2H12g26810 | 12:19,867,353-19,873,882 | - | C1H12g05519 | CX12g017595 | LOC_Os12g38780 | Os12g0576900 | - | Detail |
| C2H12g06238 | 12:19,875,946-19,878,170 | + | C1H12g22000 | CX12g017201 | LOC_Os12g38790 | Os12g0577000 | - | Detail |
| C2H12g22098 | 12:19,879,316-19,887,066 | + | C1H12g15638 | CX12g016939 | LOC_Os12g38800 | Os12g0577100 | - | Detail |
| C2H12g08874 | 12:19,892,972-19,894,012 | + | C1H12g30406 | CX12g017608 | LOC_Os12g38810 | Os12g0577200 | - | Detail |
| C2H12g22738 | 12:19,915,029-19,920,428 | + | C1H12g21439 | CX12g015208 | LOC_Os12g38850 | Os12g0577600 | - | Detail |
| C2H12g29158 | 12:19,921,945-19,924,327 | - | C1H12g00519 | CX12g018076 | LOC_Os12g38860 | Os12g0577700 | - | Detail |
| C2H12g06115 | 12:19,928,181-19,934,490 | - | C1H12g00369 | CX12g015574 | LOC_Os12g38870 | Os12g0577800 | - | Detail |
| C2H12g21149 | 12:19,948,275-19,950,104 | - | C1H12g31425 | CX12g017526 | LOC_Os12g38880 | Os12g0578000 | - | Detail |
| C2H12g11743 | 12:19,951,241-19,951,904 | + | C1H12g00225 | CX12g015487 | - | Os12g0530100 | - | Detail |
| C2H12g17013 | 12:19,954,198-19,958,515 | + | C1H12g19103 | CX12g016002 | LOC_Os12g38900 | Os12g0578200 | - | Detail |
| C2H12g27102 | 12:19,961,689-19,962,201 | + | C1H12g25977 | CX12g018018 | LOC_Os12g38910 | Os12g0578300 | - | Detail |
| C2H12g04289 | 12:19,962,292-19,966,033 | + | C1H12g25977 | CX12g018018 | LOC_Os12g38910 | Os12g0578300 | - | Detail |
| C2H12g06963 | 12:19,966,563-19,970,812 | + | C1H12g22422 | CX12g017088 | LOC_Os12g38920 | Os12g0578400 | - | Detail |
| C2H12g18495 | 12:19,971,081-19,976,738 | - | C1H12g15232 | CX12g016623 | LOC_Os12g38930 | Os12g0578500 | - | Detail |
| C2H12g09933 | 12:19,980,215-19,981,300 | - | C1H12g27740 | CX12g015550 | LOC_Os12g38940 | Os12g0578600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |