| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g24592 | 7:24,800,589-24,804,139 | - | C2H7g27364 | CX7g050407 | LOC_Os07g48570 | Os07g0685000 | OsCDF3, RDD2 | Detail |
| C1H7g20266 | 7:24,808,526-24,810,709 | - | C2H7g00607 | CX7g046130 | LOC_Os07g48596 | Os07g0685300 | - | Detail |
| C1H7g00115 | 7:24,813,288-24,826,061 | - | C2H7g22371 | CX7g048563 | LOC_Os07g48602 | Os07g0685400 | - | Detail |
| C1H7g07276 | 7:24,826,565-24,828,155 | + | C2H7g15109 | CX7g049406 | LOC_Os07g48610 | Os07g0685500 | - | Detail |
| C1H7g02497 | 7:24,839,865-24,842,541 | - | - | - | - | - | - | Detail |
| C1H7g05652 | 7:24,847,238-24,850,276 | + | C2H7g06259 | CX7g049228 | LOC_Os07g48640 | Os07g0685800 | - | Detail |
| C1H7g30031 | 7:24,850,792-24,851,492 | + | C2H7g03520 | CX7g047810 | - | - | - | Detail |
| C1H7g29619 | 7:24,853,614-24,855,950 | + | C2H7g03520 | CX7g047810 | LOC_Os07g48650 | Os07g0685900 | - | Detail |
| C1H7g31573 | 7:24,868,326-24,869,881 | + | C2H7g23755 | CX7g048415 | LOC_Os07g48660 | Os07g0686100 | OsbZIP62 | Detail |
| C1H7g28364 | 7:24,875,270-24,875,818 | - | C2H7g19090 | CX7g049506 | LOC_Os07g48680 | Os07g0686300 | - | Detail |
| C1H7g03420 | 7:24,878,097-24,885,972 | + | C2H7g01781 | - | - | - | - | Detail |
| C1H7g30458 | 7:24,881,927-24,886,215 | - | C2H7g27862 | CX7g046233 | LOC_Os07g48700 | Os07g0686400 | - | Detail |
| C1H7g19015 | 7:24,887,135-24,891,023 | + | C2H7g19437 | CX7g048143 | LOC_Os07g48690 | Os07g0686500 | - | Detail |
| C1H7g12412 | 7:24,894,785-24,895,552 | + | C2H3g13875 | CX7g046198 | LOC_Os07g48710 | Os07g0686600 | - | Detail |
| C1H7g15383 | 7:24,897,177-24,901,549 | + | C2H7g01734 | CX7g049468 | LOC_Os07g48720 | Os07g0686700 | - | Detail |
| C1H7g31507 | 7:24,902,780-24,904,384 | + | C2H7g18189 | CX7g048911 | LOC_Os07g48730 | Os07g0686800 | OsRLCK241 | Detail |
| C1H7g07622 | 7:24,906,780-24,911,724 | + | C2H7g24604 | CX7g050155 | LOC_Os07g48750 | Os07g0686900 | - | Detail |
| C1H7g15393 | 7:24,914,090-24,917,017 | + | C2H7g10362 | CX7g046159 | LOC_Os07g48760 | Os07g0687000 | CIPK03, OsCIPK03, CIPK3, OsCIPK3 | Detail |
| C1H7g28188 | 7:24,917,977-24,923,116 | - | C2H7g02535 | CX7g047608 | LOC_Os07g48780 | Os07g0687100 | - | Detail |
| C1H7g20383 | 7:24,925,157-24,927,650 | - | C2H7g06868 | CX7g047899 | LOC_Os07g48790 | Os07g0687300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g18427 | 2:12,043,001-12,047,932 | - | C1H2g29974 | CX2g022774 | LOC_Os02g22140 | Os02g0327100 | - | Detail |
| C2H2g15963 | 2:12,058,884-12,059,671 | - | C1H2g18082 | - | - | - | - | Detail |
| C2H2g01720 | 2:12,083,531-12,086,807 | + | C1H2g30192 | CX2g019787 | LOC_Os02g22160 | Os02g0327500 | - | Detail |
| C2H2g04892 | 2:12,113,521-12,120,407 | + | C1H2g12682 | CX2g020397 | - | - | - | Detail |
| C2H2g22267 | 2:12,123,543-12,128,403 | - | C1H4g03520 | CX2g023180 | LOC_Os03g21310 | Os02g0164000 | - | Detail |
| C2H2g21415 | 2:12,135,255-12,137,927 | - | C1H2g13944 | - | - | - | - | Detail |
| C2H2g14402 | 2:12,138,462-12,138,932 | - | C1H2g01926 | CX2g020091 | - | Os12g0534400 | - | Detail |
| C2H2g01200 | 2:12,139,578-12,140,467 | - | C1H2g01926 | CX2g020091 | - | - | - | Detail |
| C2H2g06243 | 2:12,173,035-12,177,264 | - | C1H2g21103 | CX2g021589 | LOC_Os02g22190 | Os02g0327700 | - | Detail |
| C2H2g30636 | 2:12,225,442-12,236,870 | + | C1H2g00957 | CX2g019841 | LOC_Os02g22260 | Os02g0328300 | - | Detail |
| C2H2g26034 | 2:12,238,037-12,239,307 | - | C1H2g02463 | CX2g021293 | LOC_Os11g36920 | Os02g0328500 | - | Detail |
| C2H2g15637 | 2:12,270,608-12,280,886 | + | C1H2g08778 | CX2g019629 | LOC_Os02g22370 | Os02g0329300 | - | Detail |
| C2H2g20325 | 2:12,281,470-12,283,121 | - | C1H2g22071 | - | - | Os04g0194800 | - | Detail |
| C2H2g27549 | 2:12,283,358-12,283,856 | - | C1H2g05163 | - | LOC_Os02g22374 | Os02g0329600 | - | Detail |
| C2H2g06904 | 2:12,288,135-12,290,700 | + | C1H2g11649 | CX2g020527 | LOC_Os02g22380 | Os02g0329800 | XAX1, OsXAX1 | Detail |
| C2H2g01429 | 2:12,322,339-12,325,231 | + | C1H2g21783 | CX2g023995 | LOC_Os02g22480 | Os02g0330200 | OsXAT2 | Detail |
| C2H2g06303 | 2:12,424,192-12,426,763 | + | C1H2g05643 | CX2g021079 | LOC_Os02g22650 | Os02g0331200 | - | Detail |
| C2H2g13933 | 2:12,454,794-12,456,966 | - | C1H2g13699 | CX2g022847 | LOC_Os02g22680 | Os02g0331400 | - | Detail |
| C2H2g10693 | 2:12,528,982-12,534,068 | - | C1H2g20055 | CX2g020636 | LOC_Os02g22780 | Os02g0332200 | - | Detail |
| C2H2g27480 | 2:13,019,497-13,027,318 | + | C1H2g26611 | CX2g020707 | LOC_Os02g23823 | Os02g0433600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |