| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g13736 | 7:24,590,113-24,595,084 | - | C2H7g19663 | CX7g047134 | LOC_Os07g48310 | Os07g0681100 | - | Detail |
| C1H7g20020 | 7:24,606,619-24,608,306 | + | C2H7g11337 | CX7g050203 | LOC_Os07g48320 | Os07g0681200 | - | Detail |
| C1H7g16933 | 7:24,611,638-24,612,297 | + | C2H7g24774 | CX3g025397 | LOC_Os07g48330 | Os07g0681300 | CYP714B1 | Detail |
| C1H7g31370 | 7:24,613,506-24,617,769 | + | C2H7g09291 | CX7g048614 | LOC_Os07g48330 | Os07g0681300 | CYP714B1 | Detail |
| C1H7g29407 | 7:24,619,837-24,620,424 | + | C2H7g02535 | CX7g047608 | LOC_Os07g48340 | Os07g0681400 | - | Detail |
| C1H7g15272 | 7:24,626,007-24,635,667 | - | C2H7g11641 | CX7g049245 | LOC_Os07g45750 | Os07g0418100 | - | Detail |
| C1H7g13652 | 7:24,639,194-24,646,868 | + | C2H7g21440 | CX7g050350 | LOC_Os07g48350 | Os07g0681500 | - | Detail |
| C1H7g23608 | 7:24,647,430-24,654,499 | + | C2H7g14830 | CX7g048418 | LOC_Os07g48360 | Os07g0681600 | OsRecQ886 | Detail |
| C1H7g23117 | 7:24,655,074-24,660,168 | + | C2H7g29810 | CX7g049603 | LOC_Os07g48370 | Os07g0681700 | - | Detail |
| C1H7g27841 | 7:24,667,689-24,668,778 | + | C2H7g24286 | CX7g049645 | LOC_Os07g48390 | Os07g0682000 | OsHIPP9 | Detail |
| C1H7g24464 | 7:24,674,175-24,678,283 | - | C2H7g06356 | CX7g046293 | LOC_Os07g48410 | Os07g0682400 | - | Detail |
| C1H7g23378 | 7:24,703,039-24,707,011 | - | C2H7g20348 | CX7g049823 | LOC_Os07g48420 | Os07g0682700 | - | Detail |
| C1H7g11299 | 7:24,709,382-24,714,153 | + | C2H7g22068 | CX7g047275 | LOC_Os07g48430 | Os07g0682800 | OsAPY3, OsAPY, RTH1 | Detail |
| C1H7g23344 | 7:24,727,696-24,729,338 | + | C2H7g15907 | CX7g047935 | LOC_Os07g48450 | Os07g0683200 | OsNAC103 | Detail |
| C1H7g12577 | 7:24,731,978-24,734,524 | + | C2H7g26142 | CX7g047088 | LOC_Os07g48490 | Os07g0683900 | - | Detail |
| C1H7g25988 | 7:24,739,081-24,741,069 | + | C2H7g26142 | CX7g047088 | LOC_Os07g48460 | Os07g0683600 | OsEULD2 | Detail |
| C1H7g13613 | 7:24,743,746-24,744,795 | + | C2H7g02908 | CX7g047088 | LOC_Os07g48500 | Os07g0684000 | OsEULS2 | Detail |
| C1H7g12898 | 7:24,746,810-24,748,283 | - | C2H7g28195 | CX7g046590 | LOC_Os07g48510 | Os07g0684100 | - | Detail |
| C1H7g14214 | 7:24,762,532-24,763,623 | - | C2H7g19082 | CX7g047739 | LOC_Os07g48550 | Os07g0684800 | - | Detail |
| C1H7g16982 | 7:24,795,708-24,797,616 | + | C2H7g21427 | CX7g049740 | LOC_Os07g48560 | Os07g0684900 | WOX11, OsWOX11, Os WOX11, OsWOX12A | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g27265 | 3:8,406,296-8,413,114 | + | C1H3g22706 | CX3g028994 | LOC_Os03g17210 | Os03g0280700 | - | Detail |
| C2H3g20835 | 3:8,414,698-8,415,657 | + | C1H3g01230 | CX3g029125 | LOC_Os03g17220 | Os03g0280750 | - | Detail |
| C2H3g25701 | 3:8,416,159-8,419,177 | - | C1H3g29688 | CX3g025025 | LOC_Os03g17230 | Os03g0280800 | OsUXS1 | Detail |
| C2H3g19709 | 3:8,420,304-8,423,679 | + | C1H3g02805 | CX3g031048 | LOC_Os03g17240 | Os03g0281000 | - | Detail |
| C2H3g01163 | 3:8,426,934-8,429,275 | + | C1H3g19384 | CX3g028226 | LOC_Os03g17250 | Os03g0281100 | - | Detail |
| C2H3g30239 | 3:8,433,479-8,434,423 | - | C1H3g05247 | CX3g026165 | LOC_Os03g17260 | Os03g0281201 | - | Detail |
| C2H3g10844 | 3:8,435,961-8,444,241 | - | C1H3g09869 | CX3g025004 | LOC_Os03g17270 | Os03g0281300 | - | Detail |
| C2H3g22572 | 3:8,445,096-8,447,903 | - | C1H3g20489 | CX3g030681 | LOC_Os03g14100 | Os03g0378500 | Os2R_MYB37 | Detail |
| C2H3g23238 | 3:8,455,311-8,457,977 | + | C1H3g05953 | CX3g030928 | LOC_Os03g17300 | Os03g0281500 | OsCrRLK1L7 | Detail |
| C2H3g13223 | 3:8,458,066-8,464,430 | - | C1H3g23808 | CX3g030523 | LOC_Os03g17310 | Os03g0281600 | OsECA1 | Detail |
| C2H3g28841 | 3:8,469,216-8,473,827 | - | C1H3g08368 | CX3g026907 | LOC_Os03g17340 | Os03g0281800 | - | Detail |
| C2H3g02883 | 3:8,476,487-8,478,850 | + | C1H3g04312 | CX3g027101 | LOC_Os03g17350 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| C2H3g04384 | 3:8,484,137-8,486,437 | + | C1H3g07058 | CX3g025177 | LOC_Os03g17370 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| C2H3g12323 | 3:8,495,135-8,500,989 | - | - | - | - | - | - | Detail |
| C2H3g12675 | 3:8,515,622-8,516,839 | + | C1H3g15208 | CX3g027572 | LOC_Os03g17432 | Os03g0282700 | - | Detail |
| C2H3g17220 | 3:8,517,221-8,519,724 | - | C1H3g13015 | CX3g026586 | LOC_Os03g17440 | Os03g0282800 | - | Detail |
| C2H3g11550 | 3:8,520,256-8,523,120 | + | C1H3g25350 | CX3g027144 | LOC_Os03g17450 | Os03g0282900 | - | Detail |
| C2H3g03924 | 3:8,524,219-8,525,364 | - | C1H3g12499 | - | LOC_Os03g17460 | Os03g0283000 | - | Detail |
| C2H3g06812 | 3:8,526,764-8,529,124 | - | C1H3g12499 | CX3g029922 | LOC_Os03g17470 | Os03g0283100 | - | Detail |
| C2H3g13775 | 3:8,532,126-8,534,265 | - | C1H3g26286 | CX3g029922 | LOC_Os03g17480 | Os03g0283200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |