| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g19852 | 1:27,939,465-27,941,499 | - | C2H1g24369 | CX1g001202 | - | Os01g0748100 | - | Detail |
| C1H1g12110 | 1:27,942,290-27,943,113 | - | C2H1g28384 | CX1g001852 | LOC_Os01g54430 | Os01g0748150 | - | Detail |
| C1H1g06433 | 1:27,948,211-27,948,642 | - | C2H1g16377 | CX1g005907 | LOC_Os01g54450 | Os01g0748300 | - | Detail |
| C1H1g03873 | 1:27,948,741-27,950,840 | + | C2H1g07802 | - | - | - | - | Detail |
| C1H1g15001 | 1:27,952,506-27,953,451 | - | C2H1g01977 | - | LOC_Os01g54460 | - | - | Detail |
| C1H1g03729 | 1:27,957,384-27,958,925 | + | C2H1g03618 | CX1g003919 | LOC_Os01g54470 | Os01g0748500 | - | Detail |
| C1H1g31289 | 1:27,959,205-27,962,965 | - | C2H1g11065 | CX1g002998 | LOC_Os01g54480 | Os01g0748600 | - | Detail |
| C1H1g13303 | 1:27,969,333-27,971,498 | + | C2H1g14520 | CX1g004481 | LOC_Os01g54490 | Os01g0748800 | - | Detail |
| C1H1g07195 | 1:27,976,833-27,977,195 | + | C2H1g25503 | CX1g002648 | - | - | - | Detail |
| C1H1g04026 | 1:27,977,529-27,981,091 | + | C2H1g05314 | CX1g006043 | LOC_Os01g54510 | Os01g0748900 | - | Detail |
| C1H1g06199 | 1:27,984,884-27,986,890 | + | C2H1g08416 | CX1g005528 | LOC_Os01g54515 | Os01g0748950 | OsNPF4.5 | Detail |
| C1H1g21519 | 1:27,987,165-27,988,265 | + | C2H1g22814 | CX1g000885 | LOC_Os01g54520 | Os01g0749000 | - | Detail |
| C1H1g06931 | 1:27,989,241-27,991,698 | + | C2H1g20660 | CX1g004193 | LOC_Os01g54530 | Os01g0749100 | - | Detail |
| C1H1g02075 | 1:27,992,483-27,994,856 | + | C2H1g21635 | CX1g000277 | LOC_Os01g54540 | Os01g0749200 | WLP1, cp rpl13, cp RPL13 | Detail |
| C1H1g00896 | 1:27,995,734-27,997,984 | + | C2H1g02265 | CX1g005465 | LOC_Os01g54550 | Os01g0749300 | HSFA4A, OsHsfA4a, OsHsfA4b, OsHsf-04, HSFA4B, HSF04, OsHSF9, RHSF9, HSF9 | Detail |
| C1H1g09179 | 1:27,998,928-28,003,010 | - | C2H1g14114 | CX1g003457 | LOC_Os01g54560 | Os01g0749400 | - | Detail |
| C1H1g19262 | 1:28,019,377-28,024,544 | + | C2H1g10922 | CX1g003630 | LOC_Os01g54580 | Os01g0749900 | - | Detail |
| C1H1g17809 | 1:28,028,092-28,031,780 | + | C2H1g29233 | CX1g000465 | LOC_Os01g54590 | Os01g0750000 | - | Detail |
| C1H1g24495 | 1:28,034,434-28,036,116 | - | C2H1g09211 | CX1g004996 | LOC_Os01g54600 | Os01g0750100 | WRKY13, OsWRKY13 | Detail |
| C1H1g00277 | 1:28,045,281-28,050,980 | + | C2H1g25863 | CX1g006527 | LOC_Os01g54620 | Os01g0750300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g07055 | 2:27,325,442-27,325,875 | - | - | CX2g024734 | LOC_Os02g48500 | - | - | Detail |
| C2H2g10463 | 2:27,348,082-27,349,248 | - | C1H2g16891 | CX2g023440 | LOC_Os02g48560 | Os02g0716500 | - | Detail |
| C2H2g21774 | 2:27,355,905-27,360,650 | - | C1H2g01901 | CX2g020074 | LOC_Os02g48570 | Os02g0716800 | - | Detail |
| C2H2g14528 | 2:27,364,835-27,366,360 | + | C1H2g08993 | CX2g019155 | LOC_Os02g48590 | Os02g0717100 | - | Detail |
| C2H2g13841 | 2:27,370,843-27,371,793 | + | - | CX2g019753 | LOC_Os02g48600 | Os02g0717200 | - | Detail |
| C2H2g18913 | 2:27,374,482-27,376,465 | + | C1H2g09406 | CX2g023240 | LOC_Os02g48610 | Os02g0717300 | - | Detail |
| C2H2g28722 | 2:27,378,934-27,390,604 | - | C1H2g19653 | CX2g019132 | LOC_Os02g48620 | Os02g0717400 | - | Detail |
| C2H2g29775 | 2:27,397,739-27,400,315 | + | C1H2g29287 | CX2g024079 | LOC_Os02g48630 | Os02g0717500 | - | Detail |
| C2H2g23859 | 2:27,400,484-27,404,148 | - | C1H2g12467 | CX2g021186 | LOC_Os02g48640 | Os02g0717600 | - | Detail |
| C2H2g28971 | 2:27,407,224-27,407,724 | + | - | CX2g023114 | LOC_Os02g48650 | Os02g0717700 | - | Detail |
| C2H2g12036 | 2:27,409,977-27,411,472 | - | C1H2g15048 | CX2g021971 | LOC_Os02g48660 | - | - | Detail |
| C2H2g01810 | 2:27,413,781-27,414,371 | - | - | CX2g023964 | LOC_Os02g48670 | Os02g0717900 | - | Detail |
| C2H2g28577 | 2:27,414,025-27,418,356 | + | C1H2g27254 | CX2g024923 | LOC_Os02g48680 | Os02g0718000 | - | Detail |
| C2H2g05372 | 2:27,425,248-27,425,457 | + | - | CX2g023541 | LOC_Os02g48710 | Os02g0718600 | - | Detail |
| C2H2g02359 | 2:27,430,050-27,433,481 | + | C1H2g29414 | CX2g024042 | LOC_Os02g48720 | Os02g0718900 | - | Detail |
| C2H2g19251 | 2:27,435,328-27,436,899 | - | - | - | LOC_Os02g44654 | Os02g0666500 | - | Detail |
| C2H2g20525 | 2:27,437,591-27,440,106 | + | C1H2g26150 | CX2g021808 | LOC_Os02g48730 | Os02g0719000 | - | Detail |
| C2H2g12096 | 2:27,443,599-27,448,371 | + | C1H2g28212 | CX2g021733 | LOC_Os02g48740 | Os02g0719100 | - | Detail |
| C2H2g00700 | 2:27,463,902-27,465,782 | + | C1H2g06293 | CX2g022686 | LOC_Os02g48770 | Os02g0719600 | - | Detail |
| C2H2g26511 | 2:27,472,355-27,472,975 | + | C1H2g04256 | CX2g022391 | LOC_Os02g48780 | Os02g0719700 | OsBAG5 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |