| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g19852 | 1:27,939,465-27,941,499 | - | C2H1g24369 | CX1g001202 | - | Os01g0748100 | - | Detail |
| C1H1g12110 | 1:27,942,290-27,943,113 | - | C2H1g28384 | CX1g001852 | LOC_Os01g54430 | Os01g0748150 | - | Detail |
| C1H1g06433 | 1:27,948,211-27,948,642 | - | C2H1g16377 | CX1g005907 | LOC_Os01g54450 | Os01g0748300 | - | Detail |
| C1H1g03873 | 1:27,948,741-27,950,840 | + | C2H1g07802 | - | - | - | - | Detail |
| C1H1g15001 | 1:27,952,506-27,953,451 | - | C2H1g01977 | - | LOC_Os01g54460 | - | - | Detail |
| C1H1g03729 | 1:27,957,384-27,958,925 | + | C2H1g03618 | CX1g003919 | LOC_Os01g54470 | Os01g0748500 | - | Detail |
| C1H1g31289 | 1:27,959,205-27,962,965 | - | C2H1g11065 | CX1g002998 | LOC_Os01g54480 | Os01g0748600 | - | Detail |
| C1H1g13303 | 1:27,969,333-27,971,498 | + | C2H1g14520 | CX1g004481 | LOC_Os01g54490 | Os01g0748800 | - | Detail |
| C1H1g07195 | 1:27,976,833-27,977,195 | + | C2H1g25503 | CX1g002648 | - | - | - | Detail |
| C1H1g04026 | 1:27,977,529-27,981,091 | + | C2H1g05314 | CX1g006043 | LOC_Os01g54510 | Os01g0748900 | - | Detail |
| C1H1g06199 | 1:27,984,884-27,986,890 | + | C2H1g08416 | CX1g005528 | LOC_Os01g54515 | Os01g0748950 | OsNPF4.5 | Detail |
| C1H1g21519 | 1:27,987,165-27,988,265 | + | C2H1g22814 | CX1g000885 | LOC_Os01g54520 | Os01g0749000 | - | Detail |
| C1H1g06931 | 1:27,989,241-27,991,698 | + | C2H1g20660 | CX1g004193 | LOC_Os01g54530 | Os01g0749100 | - | Detail |
| C1H1g02075 | 1:27,992,483-27,994,856 | + | C2H1g21635 | CX1g000277 | LOC_Os01g54540 | Os01g0749200 | WLP1, cp rpl13, cp RPL13 | Detail |
| C1H1g00896 | 1:27,995,734-27,997,984 | + | C2H1g02265 | CX1g005465 | LOC_Os01g54550 | Os01g0749300 | HSFA4A, OsHsfA4a, OsHsfA4b, OsHsf-04, HSFA4B, HSF04, OsHSF9, RHSF9, HSF9 | Detail |
| C1H1g09179 | 1:27,998,928-28,003,010 | - | C2H1g14114 | CX1g003457 | LOC_Os01g54560 | Os01g0749400 | - | Detail |
| C1H1g19262 | 1:28,019,377-28,024,544 | + | C2H1g10922 | CX1g003630 | LOC_Os01g54580 | Os01g0749900 | - | Detail |
| C1H1g17809 | 1:28,028,092-28,031,780 | + | C2H1g29233 | CX1g000465 | LOC_Os01g54590 | Os01g0750000 | - | Detail |
| C1H1g24495 | 1:28,034,434-28,036,116 | - | C2H1g09211 | CX1g004996 | LOC_Os01g54600 | Os01g0750100 | WRKY13, OsWRKY13 | Detail |
| C1H1g00277 | 1:28,045,281-28,050,980 | + | C2H1g25863 | CX1g006527 | LOC_Os01g54620 | Os01g0750300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g03662 | 2:15,466,298-15,477,537 | + | C1H2g03922 | CX2g022863 | LOC_Os02g27000 | Os02g0469300 | - | Detail |
| C2H2g19137 | 2:15,485,325-15,489,014 | + | C1H2g14140 | CX2g021164 | LOC_Os02g27030 | Os02g0469600 | OsACP1 | Detail |
| C2H2g21339 | 2:15,502,866-15,505,034 | + | C1H2g09800 | CX2g022256 | LOC_Os02g27060 | Os02g0469900 | - | Detail |
| C2H2g06526 | 2:15,506,193-15,506,994 | + | C1H2g09800 | CX2g022256 | LOC_Os02g27060 | Os02g0469900 | - | Detail |
| C2H2g23766 | 2:15,529,774-15,541,632 | - | C1H2g01442 | CX2g020404 | LOC_Os02g27110 | Os02g0470400 | - | Detail |
| C2H2g18897 | 2:15,553,271-15,556,415 | - | - | CX2g020404 | LOC_Os02g27130 | - | - | Detail |
| C2H2g27319 | 2:15,558,560-15,573,059 | - | C1H2g17839 | CX2g020404 | LOC_Os02g27130 | Os02g0470600 | - | Detail |
| C2H2g07152 | 2:15,590,658-15,593,435 | + | C1H2g07522 | CX2g020865 | LOC_Os02g27200 | Os02g0471300 | - | Detail |
| C2H2g29356 | 2:15,596,718-15,601,140 | - | C1H2g05586 | CX2g021066 | LOC_Os02g27220 | Os02g0471500 | - | Detail |
| C2H2g07089 | 2:15,667,110-15,667,794 | + | C1H2g13395 | CX2g020901 | LOC_Os02g27300 | Os02g0472500 | - | Detail |
| C2H2g29417 | 2:15,674,494-15,678,518 | + | C1H2g20001 | CX2g020901 | LOC_Os02g27310 | Os02g0472566 | - | Detail |
| C2H2g11544 | 2:15,678,912-15,679,847 | + | C1H2g20001 | CX2g019519 | LOC_Os02g27310 | Os02g0472700 | MAK3 | Detail |
| C2H2g00979 | 2:15,691,066-15,697,354 | - | C1H2g15677 | CX2g020971 | - | Os02g0473000 | - | Detail |
| C2H2g19592 | 2:15,698,657-15,703,500 | - | C1H2g14078 | CX2g020109 | LOC_Os02g27360 | Os02g0473200 | - | Detail |
| C2H2g26308 | 2:15,708,843-15,709,430 | + | - | CX2g023748 | - | - | - | Detail |
| C2H2g15757 | 2:15,728,057-15,744,264 | + | C1H2g22573 | CX2g020578 | LOC_Os02g27440 | Os02g0474300 | - | Detail |
| C2H2g01789 | 2:15,766,549-15,785,240 | + | C1H2g16641 | CX2g022898 | LOC_Os02g27470 | Os02g0474700 | - | Detail |
| C2H2g25541 | 2:15,821,295-15,822,365 | - | C1H2g31225 | CX2g024345 | - | Os02g0741800 | - | Detail |
| C2H2g06095 | 2:15,838,372-15,840,164 | - | C1H2g09822 | - | - | - | - | Detail |
| C2H2g21853 | 2:15,846,174-15,850,460 | + | C1H2g23802 | CX2g024681 | LOC_Os02g27480 | Os02g0475300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |