| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g19852 | 1:27,939,465-27,941,499 | - | C2H1g24369 | CX1g001202 | - | Os01g0748100 | - | Detail |
| C1H1g12110 | 1:27,942,290-27,943,113 | - | C2H1g28384 | CX1g001852 | LOC_Os01g54430 | Os01g0748150 | - | Detail |
| C1H1g06433 | 1:27,948,211-27,948,642 | - | C2H1g16377 | CX1g005907 | LOC_Os01g54450 | Os01g0748300 | - | Detail |
| C1H1g03873 | 1:27,948,741-27,950,840 | + | C2H1g07802 | - | - | - | - | Detail |
| C1H1g15001 | 1:27,952,506-27,953,451 | - | C2H1g01977 | - | LOC_Os01g54460 | - | - | Detail |
| C1H1g03729 | 1:27,957,384-27,958,925 | + | C2H1g03618 | CX1g003919 | LOC_Os01g54470 | Os01g0748500 | - | Detail |
| C1H1g31289 | 1:27,959,205-27,962,965 | - | C2H1g11065 | CX1g002998 | LOC_Os01g54480 | Os01g0748600 | - | Detail |
| C1H1g13303 | 1:27,969,333-27,971,498 | + | C2H1g14520 | CX1g004481 | LOC_Os01g54490 | Os01g0748800 | - | Detail |
| C1H1g07195 | 1:27,976,833-27,977,195 | + | C2H1g25503 | CX1g002648 | - | - | - | Detail |
| C1H1g04026 | 1:27,977,529-27,981,091 | + | C2H1g05314 | CX1g006043 | LOC_Os01g54510 | Os01g0748900 | - | Detail |
| C1H1g06199 | 1:27,984,884-27,986,890 | + | C2H1g08416 | CX1g005528 | LOC_Os01g54515 | Os01g0748950 | OsNPF4.5 | Detail |
| C1H1g21519 | 1:27,987,165-27,988,265 | + | C2H1g22814 | CX1g000885 | LOC_Os01g54520 | Os01g0749000 | - | Detail |
| C1H1g06931 | 1:27,989,241-27,991,698 | + | C2H1g20660 | CX1g004193 | LOC_Os01g54530 | Os01g0749100 | - | Detail |
| C1H1g02075 | 1:27,992,483-27,994,856 | + | C2H1g21635 | CX1g000277 | LOC_Os01g54540 | Os01g0749200 | WLP1, cp rpl13, cp RPL13 | Detail |
| C1H1g00896 | 1:27,995,734-27,997,984 | + | C2H1g02265 | CX1g005465 | LOC_Os01g54550 | Os01g0749300 | HSFA4A, OsHsfA4a, OsHsfA4b, OsHsf-04, HSFA4B, HSF04, OsHSF9, RHSF9, HSF9 | Detail |
| C1H1g09179 | 1:27,998,928-28,003,010 | - | C2H1g14114 | CX1g003457 | LOC_Os01g54560 | Os01g0749400 | - | Detail |
| C1H1g19262 | 1:28,019,377-28,024,544 | + | C2H1g10922 | CX1g003630 | LOC_Os01g54580 | Os01g0749900 | - | Detail |
| C1H1g17809 | 1:28,028,092-28,031,780 | + | C2H1g29233 | CX1g000465 | LOC_Os01g54590 | Os01g0750000 | - | Detail |
| C1H1g24495 | 1:28,034,434-28,036,116 | - | C2H1g09211 | CX1g004996 | LOC_Os01g54600 | Os01g0750100 | WRKY13, OsWRKY13 | Detail |
| C1H1g00277 | 1:28,045,281-28,050,980 | + | C2H1g25863 | CX1g006527 | LOC_Os01g54620 | Os01g0750300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g17112 | 1:1,806,671-1,808,720 | + | C1H1g05122 | - | - | Os01g0139600 | - | Detail |
| C2H1g10438 | 1:1,812,631-1,812,942 | - | C1H1g03275 | CX1g005592 | LOC_Os01g04670 | Os01g0139700 | - | Detail |
| C2H1g06897 | 1:1,818,259-1,818,519 | - | C1H1g00558 | CX1g006410 | LOC_Os01g04690 | Os01g0139900 | - | Detail |
| C2H1g19050 | 1:1,827,392-1,828,885 | + | C1H1g20732 | CX1g001618 | LOC_Os01g04710 | Os01g0140100 | - | Detail |
| C2H1g22483 | 1:1,835,091-1,841,264 | + | C1H1g31447 | CX1g006468 | LOC_Os01g04720 | Os01g0140400 | - | Detail |
| C2H1g01847 | 1:1,841,812-1,842,285 | + | C1H11g10773 | CX1g000444 | LOC_Os01g04730 | Os01g0140500 | - | Detail |
| C2H1g19937 | 1:1,859,009-1,859,986 | + | C1H1g08742 | CX1g006554 | LOC_Os01g04750 | Os01g0140700 | OsRAV8 | Detail |
| C2H1g00612 | 1:1,883,238-1,884,341 | + | C1H1g08742 | CX1g004648 | LOC_Os01g04800 | Os01g0141000 | AP2/EREBP129, AP2/EREBP#129, OsRAV2, RAV2, OsRAV9, OsTEM1, OsRAV9/OsTEM1 | Detail |
| C2H1g12872 | 1:1,897,291-1,904,911 | - | C1H1g09982 | CX1g002238 | LOC_Os01g04814 | Os01g0141300 | - | Detail |
| C2H1g10361 | 1:1,911,034-1,914,184 | - | C1H1g01035 | CX1g004748 | LOC_Os01g04840 | Os01g0141300 | - | Detail |
| C2H1g30366 | 1:1,919,486-1,924,052 | + | C1H1g10013 | CX1g006709 | LOC_Os01g04860 | Os01g0141600 | - | Detail |
| C2H1g30003 | 1:1,924,491-1,928,743 | - | C1H1g07767 | CX1g005046 | LOC_Os01g04870 | Os01g0141700 | OsUV-DDB2 | Detail |
| C2H1g13473 | 1:1,932,131-1,936,292 | + | C1H1g20192 | CX1g003408 | LOC_Os01g04880 | Os01g0141900 | - | Detail |
| C2H1g10525 | 1:1,936,885-1,941,395 | - | C1H1g08627 | CX1g004217 | LOC_Os01g04900 | Os01g0142100 | - | Detail |
| C2H1g29642 | 1:1,941,607-1,943,614 | + | C1H1g24636 | CX1g004602 | LOC_Os01g04910 | Os01g0142200 | - | Detail |
| C2H1g02460 | 1:1,945,831-1,949,084 | + | C1H1g21356 | CX1g005334 | LOC_Os01g04920 | Os01g0142300 | SQD2.2, OsSQD2.2 | Detail |
| C2H1g07926 | 1:1,952,640-1,955,658 | - | C1H1g15125 | CX1g001148 | LOC_Os01g04930 | Os01g0142500 | Os2R_MYB2 | Detail |
| C2H1g24212 | 1:1,967,041-1,970,803 | + | C1H1g12761 | CX1g007203 | LOC_Os01g04950 | Os01g0142800 | - | Detail |
| C2H1g27664 | 1:1,981,213-1,987,698 | + | C1H1g04145 | CX1g004074 | LOC_Os01g16740 | Os01g0852650 | - | Detail |
| C2H1g02643 | 1:1,987,707-1,994,774 | - | C1H1g19528 | CX1g003393 | LOC_Os01g16730 | Os01g0946800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |