| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g11177 | 7:20,174,274-20,176,244 | - | C2H7g03070 | CX7g046857 | LOC_Os07g39740 | Os07g0586100 | PChE | Detail |
| C1H7g31708 | 7:20,180,689-20,184,505 | - | C2H7g20298 | CX7g050090 | LOC_Os07g39750 | Os07g0586200 | - | Detail |
| C1H7g28144 | 7:20,192,547-20,199,198 | + | C2H7g01650 | CX7g046227 | LOC_Os07g39780 | Os07g0586500 | - | Detail |
| C1H7g30368 | 7:20,200,325-20,200,915 | - | - | CX7g047062 | LOC_Os07g39790 | Os07g0586600 | - | Detail |
| C1H7g03308 | 7:20,201,336-20,204,346 | - | C2H7g25217 | CX7g049224 | LOC_Os07g39800 | Os07g0586700 | - | Detail |
| C1H7g20287 | 7:20,209,722-20,210,492 | - | C2H7g10425 | CX7g049264 | LOC_Os07g39810 | Os07g0586800 | - | Detail |
| C1H7g26123 | 7:20,228,584-20,230,389 | + | C2H7g15547 | CX7g049212 | LOC_Os07g39820 | Os07g0586900 | OsSHR1 | Detail |
| C1H7g04106 | 7:20,245,398-20,247,214 | + | C2H7g30340 | CX7g047969 | LOC_Os07g39830 | Os07g0587000 | - | Detail |
| C1H7g17905 | 7:20,248,674-20,251,675 | - | C2H7g05226 | CX7g049988 | - | - | - | Detail |
| C1H7g10975 | 7:20,254,655-20,257,725 | - | C2H7g03999 | CX7g047961 | LOC_Os07g39840 | Os07g0587100 | - | Detail |
| C1H7g12981 | 7:20,260,234-20,266,162 | - | C2H7g16477 | CX7g047553 | LOC_Os07g39850 | Os07g0587250 | - | Detail |
| C1H7g02974 | 7:20,269,054-20,272,079 | - | C2H7g21246 | CX7g047421 | LOC_Os07g39860 | Os07g0587300 | - | Detail |
| C1H7g21618 | 7:20,272,095-20,273,408 | - | C2H7g09412 | CX7g049856 | LOC_Os07g39870 | Os07g0587400 | - | Detail |
| C1H7g20876 | 7:20,279,050-20,280,720 | + | C2H7g01401 | CX7g049014 | LOC_Os07g39590 | Os07g0587500 | - | Detail |
| C1H7g18991 | 7:20,289,777-20,290,637 | + | C2H7g00832 | CX7g049825 | LOC_Os08g36610 | Os08g0470000 | - | Detail |
| C1H7g01361 | 7:20,290,837-20,291,204 | + | C2H7g10776 | - | - | - | - | Detail |
| C1H7g24204 | 7:20,295,546-20,300,827 | + | C2H7g18878 | CX7g048955 | LOC_Os07g39900 | Os07g0588000 | - | Detail |
| C1H7g31387 | 7:20,295,548-20,295,988 | - | C2H7g07367 | - | - | - | - | Detail |
| C1H7g02347 | 7:20,303,353-20,305,788 | - | C2H7g11193 | CX7g049230 | LOC_Os07g39910 | Os07g0588100 | - | Detail |
| C1H7g29391 | 7:20,311,443-20,317,488 | + | C2H7g03480 | CX7g047625 | LOC_Os07g39920 | Os07g0588200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g12888 | 5:1,454,303-1,458,741 | + | C1H5g06409 | CX5g038529 | - | Os05g0575400 | - | Detail |
| C2H5g25220 | 5:1,466,544-1,467,068 | - | C1H5g14331 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C2H5g24745 | 5:1,471,155-1,472,263 | - | C1H5g14331 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C2H5g23667 | 5:1,478,681-1,480,492 | - | C1H5g16799 | - | - | - | - | Detail |
| C2H5g10940 | 5:1,485,921-1,486,759 | + | C1H5g11198 | CX5g037909 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| C2H5g13765 | 5:1,487,425-1,491,486 | - | C1H5g15292 | CX5g038918 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| C2H5g03241 | 5:1,493,234-1,494,460 | + | C1H3g03993 | CX5g037263 | LOC_Os12g34990 | Os03g0288300 | - | Detail |
| C2H5g20349 | 5:1,498,611-1,502,634 | + | C1H5g09306 | CX5g036768 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| C2H5g12419 | 5:1,520,537-1,521,252 | + | - | - | LOC_Os05g03960 | Os05g0130300 | - | Detail |
| C2H5g28718 | 5:1,521,612-1,529,770 | - | C1H5g31896 | CX5g040404 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| C2H5g08536 | 5:1,536,595-1,537,004 | - | C1H5g15210 | - | - | Os05g0130500 | - | Detail |
| C2H5g08634 | 5:1,538,539-1,539,316 | + | - | - | LOC_Os05g04000 | Os05g0130600 | - | Detail |
| C2H5g17204 | 5:1,541,642-1,546,148 | - | C1H5g13927 | CX5g040242 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| C2H5g23034 | 5:1,546,919-1,547,381 | + | C1H5g19982 | CX5g038388 | - | - | - | Detail |
| C2H5g10179 | 5:1,548,863-1,550,139 | + | C1H5g21167 | - | - | - | - | Detail |
| C2H5g12456 | 5:1,556,561-1,559,128 | - | C1H5g11003 | - | LOC_Os05g04070 | Os05g0131100 | - | Detail |
| C2H5g08847 | 5:1,561,924-1,566,163 | - | C1H5g23202 | - | LOC_Os05g04070 | Os05g0131401 | - | Detail |
| C2H5g12807 | 5:1,568,750-1,571,496 | - | C1H5g00064 | CX5g041042 | LOC_Os05g04120 | Os05g0131500 | - | Detail |
| C2H5g15022 | 5:1,573,614-1,581,468 | - | C1H5g06759 | CX5g037262 | - | - | - | Detail |
| C2H5g11311 | 5:1,588,305-1,591,921 | + | C1H5g22859 | CX5g040539 | LOC_Os05g04150 | Os05g0131900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |