| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g14556 | 7:19,162,002-19,162,232 | - | - | CX7g047166 | LOC_Os07g37700 | Os07g0564200 | - | Detail |
| C1H7g17423 | 7:19,168,314-19,168,914 | + | - | - | LOC_Os07g37720 | - | - | Detail |
| C1H7g09465 | 7:19,176,598-19,177,359 | + | - | - | LOC_Os07g37720 | - | - | Detail |
| C1H7g30157 | 7:19,185,732-19,187,611 | + | C2H7g06233 | CX7g050409 | LOC_Os07g37730 | Os07g0564500 | - | Detail |
| C1H7g14548 | 7:19,189,869-19,193,914 | - | C2H7g16795 | CX7g047984 | LOC_Os07g37740 | Os07g0564600 | - | Detail |
| C1H7g21741 | 7:19,196,289-19,207,353 | - | C2H7g08551 | CX7g049691 | LOC_Os07g37750 | Os07g0564700 | - | Detail |
| C1H7g14667 | 7:19,210,137-19,214,537 | - | C2H7g00466 | CX7g046115 | LOC_Os07g37760 | Os07g0564800 | - | Detail |
| C1H7g02934 | 7:19,217,089-19,220,767 | - | C2H7g22128 | CX7g046371 | LOC_Os07g37800 | Os07g0565300 | - | Detail |
| C1H7g19972 | 7:19,222,139-19,228,098 | - | C2H7g25505 | CX7g049526 | LOC_Os07g37810 | Os07g0565400 | - | Detail |
| C1H7g01660 | 7:19,231,762-19,236,523 | - | C2H7g06746 | - | LOC_Os07g37820 | Os07g0565500 | - | Detail |
| C1H7g16856 | 7:19,238,134-19,243,928 | + | C2H7g03775 | CX7g046390 | LOC_Os07g37830 | Os07g0565600 | - | Detail |
| C1H7g17613 | 7:19,243,994-19,245,016 | - | C2H7g27856 | CX7g050301 | LOC_Os07g37840 | Os07g0565700 | - | Detail |
| C1H7g23398 | 7:19,246,464-19,246,811 | - | C2H7g12315 | - | LOC_Os07g37850 | Os07g0565800 | - | Detail |
| C1H7g25571 | 7:19,250,683-19,255,986 | - | - | - | LOC_Os07g37880 | - | - | Detail |
| C1H7g24487 | 7:19,263,575-19,268,608 | - | C2H7g15291 | CX7g049991 | LOC_Os07g37890 | Os07g0566200 | - | Detail |
| C1H7g23967 | 7:19,281,681-19,283,258 | - | C2H7g21369 | CX7g048841 | LOC_Os07g37920 | Os07g0566500 | ONAC010 | Detail |
| C1H7g17690 | 7:19,296,313-19,296,906 | - | C2H7g06717 | CX7g046904 | LOC_Os07g37950 | Os07g0566800 | - | Detail |
| C1H7g28095 | 7:19,304,116-19,308,112 | + | C2H7g12522 | CX7g048870 | LOC_Os07g37960 | Os07g0567000 | - | Detail |
| C1H7g03714 | 7:19,309,412-19,311,571 | + | C2H7g03265 | CX7g049139 | LOC_Os07g37970 | Os07g0567100 | - | Detail |
| C1H7g19298 | 7:19,315,211-19,321,886 | - | C2H7g06993 | CX7g049004 | LOC_Os07g37990 | Os07g0567300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g09365 | 3:14,022,692-14,029,760 | - | C1H3g05327 | CX3g027782 | LOC_Os03g27510 | Os03g0393700 | - | Detail |
| C2H3g30087 | 3:14,032,064-14,034,436 | - | C1H3g01352 | CX3g026293 | LOC_Os03g32580 | Os03g0211900 | - | Detail |
| C2H3g11623 | 3:14,034,559-14,035,580 | - | C1H3g05517 | CX3g028044 | LOC_Os03g28270 | Os03g0400800 | - | Detail |
| C2H3g10908 | 3:14,044,828-14,047,298 | - | C1H3g19955 | CX3g027788 | LOC_Os03g32580 | Os03g0145102 | - | Detail |
| C2H3g03280 | 3:14,048,897-14,050,147 | + | - | - | - | - | - | Detail |
| C2H3g07142 | 3:14,050,595-14,051,936 | + | - | - | - | - | - | Detail |
| C2H3g17405 | 3:14,057,376-14,058,446 | - | - | - | - | - | - | Detail |
| C2H3g04527 | 3:14,069,232-14,069,991 | - | C1H3g05517 | CX3g028044 | LOC_Os03g28270 | Os03g0400800 | - | Detail |
| C2H3g28189 | 3:14,070,010-14,070,943 | - | C1H3g05517 | CX3g028044 | LOC_Os03g28270 | Os03g0400800 | - | Detail |
| C2H3g21452 | 3:14,083,851-14,085,452 | - | C1H3g17401 | CX3g029574 | - | Os03g0184000 | OsPDS | Detail |
| C2H3g10220 | 3:14,094,321-14,100,635 | - | C1H3g27278 | CX3g031229 | LOC_Os03g28270 | Os03g0400800 | - | Detail |
| C2H3g08253 | 3:14,104,054-14,104,308 | - | - | - | - | - | - | Detail |
| C2H3g06277 | 3:14,167,794-14,171,626 | - | C1H3g13238 | CX3g029516 | LOC_Os03g32580 | Os03g0773700 | - | Detail |
| C2H3g13071 | 3:14,219,645-14,219,983 | - | - | - | LOC_Os02g28210 | - | - | Detail |
| C2H3g00521 | 3:14,231,740-14,241,021 | - | C1H3g28596 | CX3g026827 | LOC_Os03g27550 | Os03g0393300 | - | Detail |
| C2H3g03469 | 3:14,295,554-14,300,370 | - | C1H3g26998 | CX3g027706 | LOC_Os03g27550 | Os03g0393700 | - | Detail |
| C2H3g01147 | 3:14,307,579-14,309,156 | + | C1H3g17152 | CX3g026110 | LOC_Os03g27610 | Os03g0393900 | OsMATL, OspPLAIIφ, OspPLAIIphi, OsPLP1, PLP1, OspPLAIIbeta | Detail |
| C2H3g26978 | 3:14,380,764-14,384,352 | - | C1H3g03234 | CX3g027952 | LOC_Os03g27760 | Os03g0394900 | - | Detail |
| C2H3g09617 | 3:14,398,273-14,401,752 | - | C1H3g11733 | CX3g030447 | LOC_Os03g27770 | Os03g0395000 | - | Detail |
| C2H3g01443 | 3:14,407,064-14,410,216 | + | C1H3g19183 | CX3g028476 | LOC_Os03g27780 | Os03g0395100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |