| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g11398 | 7:18,073,924-18,076,736 | - | C2H7g27139 | CX7g049700 | LOC_Os07g35870 | Os07g0543000 | - | Detail |
| C1H7g26173 | 7:18,077,771-18,080,307 | + | C2H7g10855 | CX7g049636 | LOC_Os07g35880 | Os07g0543100 | - | Detail |
| C1H7g27722 | 7:18,090,937-18,093,830 | + | C2H7g30345 | CX7g048392 | LOC_Os07g35940 | Os07g0543300 | - | Detail |
| C1H7g28450 | 7:18,100,277-18,104,254 | + | C2H7g18482 | CX7g048470 | LOC_Os07g35960 | Os07g0543500 | - | Detail |
| C1H7g00117 | 7:18,114,906-18,116,243 | + | C2H7g21073 | CX7g046011 | LOC_Os07g35970 | Os07g0543600 | - | Detail |
| C1H7g14703 | 7:18,118,749-18,120,102 | + | C2H7g00663 | CX7g048334 | LOC_Os07g36080 | Os07g0544800 | - | Detail |
| C1H7g11294 | 7:18,121,764-18,123,385 | - | C2H7g09772 | CX7g047901 | LOC_Os07g36090 | Os07g0544900 | - | Detail |
| C1H7g09872 | 7:18,126,965-18,127,725 | + | C2H7g25088 | CX7g048191 | LOC_Os07g36110 | Os07g0545100 | - | Detail |
| C1H7g13466 | 7:18,134,088-18,134,778 | + | C2H7g06320 | CX7g050034 | LOC_Os07g36130 | Os07g0545300 | - | Detail |
| C1H7g10078 | 7:18,136,894-18,137,944 | + | C2H7g09035 | CX7g049637 | LOC_Os07g36140 | Os07g0545400 | - | Detail |
| C1H7g28302 | 7:18,139,258-18,144,079 | - | C2H7g30235 | CX7g046630 | LOC_Os07g36150 | Os07g0545500 | - | Detail |
| C1H7g22756 | 7:18,161,121-18,163,925 | + | C2H7g14575 | CX7g048135 | LOC_Os07g36170 | Os07g0545800 | CIGR1 | Detail |
| C1H7g17711 | 7:18,165,811-18,168,869 | + | C2H7g20913 | CX7g047174 | LOC_Os07g36180 | Os07g0545900 | - | Detail |
| C1H7g04714 | 7:18,170,181-18,173,390 | + | C2H7g07533 | CX7g046575 | LOC_Os07g36190 | Os07g0546000 | IPPI1, OsIPPI1 | Detail |
| C1H7g04165 | 7:18,174,139-18,177,978 | + | C2H7g29096 | CX7g046028 | LOC_Os07g36200 | Os07g0546100 | - | Detail |
| C1H7g13151 | 7:18,181,029-18,181,313 | - | C2H7g27021 | CX7g049748 | LOC_Os07g36210 | - | - | Detail |
| C1H7g16184 | 7:18,196,283-18,200,375 | + | C2H7g00275 | CX7g047693 | LOC_Os07g36230 | Os07g0546400 | - | Detail |
| C1H7g11203 | 7:18,211,516-18,214,782 | - | C2H7g06771 | CX7g050158 | LOC_Os07g36250 | Os07g0546600 | - | Detail |
| C1H7g24425 | 7:18,215,906-18,217,060 | - | C2H7g06771 | CX7g049921 | LOC_Os11g24610 | Os07g0546700 | - | Detail |
| C1H7g17328 | 7:18,218,990-18,220,351 | - | C2H7g28298 | CX7g048232 | LOC_Os07g36260 | Os07g0546750 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g19266 | 1:31,509,696-31,513,272 | - | C1H1g00383 | CX1g001311 | LOC_Os01g61580 | Os01g0832200 | - | Detail |
| C2H1g14897 | 1:31,519,060-31,524,680 | + | C1H1g00574 | CX1g004790 | LOC_Os01g61590 | Os01g0832300 | OsCPK3 | Detail |
| C2H1g11131 | 1:31,539,536-31,545,198 | + | C1H1g31694 | CX1g000601 | LOC_Os01g61610 | Os01g0832600 | - | Detail |
| C2H1g22191 | 1:31,557,505-31,562,700 | + | C1H1g07002 | CX1g006439 | LOC_Os01g61620 | Os01g0832900 | - | Detail |
| C2H1g03571 | 1:31,563,054-31,565,051 | + | C1H1g10107 | CX1g006609 | LOC_Os01g61630 | Os01g0833000 | - | Detail |
| C2H1g17085 | 1:31,565,343-31,568,129 | - | C1H1g13635 | CX1g003404 | LOC_Os01g61640 | Os01g0833100 | - | Detail |
| C2H1g00983 | 1:31,572,935-31,573,270 | + | C1H1g07003 | CX1g003333 | LOC_Os01g61670 | Os01g0833150 | - | Detail |
| C2H1g27052 | 1:31,573,508-31,576,185 | + | C1H1g07003 | CX1g003333 | LOC_Os01g61670 | Os01g0833200 | - | Detail |
| C2H1g24837 | 1:31,577,218-31,577,884 | + | C1H1g07552 | CX1g005332 | LOC_Os01g61680 | Os01g0833400 | - | Detail |
| C2H1g22767 | 1:31,578,637-31,582,534 | - | C1H1g26345 | CX1g001176 | LOC_Os01g61690 | Os01g0833500 | - | Detail |
| C2H1g05497 | 1:31,583,766-31,584,739 | - | C1H1g02922 | CX1g000140 | LOC_Os01g61700 | Os01g0833600 | - | Detail |
| C2H1g26726 | 1:31,585,550-31,592,623 | - | C1H1g09497 | CX1g003313 | LOC_Os01g61710 | Os01g0833700 | - | Detail |
| C2H1g11920 | 1:31,594,680-31,598,908 | - | C1H1g22933 | CX1g003450 | LOC_Os01g61720 | Os01g0833800 | - | Detail |
| C2H1g18321 | 1:31,610,325-31,616,645 | + | C1H1g06428 | CX1g005181 | - | Os01g0663400 | - | Detail |
| C2H1g11202 | 1:31,625,734-31,626,432 | + | C1H1g08789 | - | LOC_Os01g61750 | - | - | Detail |
| C2H1g03973 | 1:31,626,307-31,630,738 | - | C1H1g12416 | CX1g000146 | LOC_Os01g61760 | Os01g0834100 | - | Detail |
| C2H1g25411 | 1:31,635,422-31,646,181 | + | C1H1g06212 | CX1g002696 | LOC_Os01g61780 | Os01g0834200 | - | Detail |
| C2H1g04378 | 1:31,652,315-31,654,763 | - | C1H1g30061 | CX1g000392 | LOC_Os01g61810 | Os01g0834400 | HAP3A, OsHAP3A, OsNF-YB-2, NFYB2 | Detail |
| C2H1g11057 | 1:31,654,816-31,655,016 | - | C1H1g30061 | CX1g000392 | LOC_Os01g61810 | Os01g0834400 | HAP3A, OsHAP3A, OsNF-YB-2, NFYB2 | Detail |
| C2H1g10042 | 1:31,660,441-31,661,642 | - | C1H1g07712 | CX1g001710 | LOC_Os01g61814 | Os01g0834500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |