| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g08222 | 7:16,331,220-16,336,103 | - | C2H7g24552 | CX7g046461 | LOC_Os07g33050 | Os07g0514400 | - | Detail |
| C1H7g14050 | 7:16,369,299-16,375,523 | + | C2H7g08026 | CX7g048067 | LOC_Os07g33100 | Os07g0515000 | - | Detail |
| C1H7g12050 | 7:16,375,948-16,381,407 | - | C2H7g25765 | CX7g048097 | LOC_Os07g33110 | Os07g0515100 | OsCDPK2 | Detail |
| C1H7g28151 | 7:16,388,395-16,389,830 | + | - | - | LOC_Os07g45530 | - | - | Detail |
| C1H7g03601 | 7:16,398,633-16,398,977 | - | - | - | - | - | - | Detail |
| C1H7g14893 | 7:16,405,584-16,410,713 | + | C2H7g02653 | - | LOC_Os07g33200 | Os07g0515700 | - | Detail |
| C1H7g27021 | 7:16,415,926-16,423,826 | + | C2H7g30111 | - | LOC_Os07g33200 | Os07g0515900 | - | Detail |
| C1H7g28613 | 7:16,426,164-16,432,827 | + | C2H7g17448 | CX7g047819 | LOC_Os07g33224 | Os07g0516050 | - | Detail |
| C1H7g05816 | 7:16,444,432-16,444,674 | + | - | - | - | - | - | Detail |
| C1H7g19632 | 7:16,444,831-16,445,112 | + | C2H7g26827 | CX7g050382 | LOC_Os07g33230 | Os07g0507000 | OsPP95 | Detail |
| C1H7g31619 | 7:16,447,855-16,450,300 | + | C2H7g03457 | CX7g048373 | LOC_Os07g33240 | Os07g0516200 | - | Detail |
| C1H7g20323 | 7:16,500,400-16,503,486 | + | C2H7g07247 | CX7g047014 | LOC_Os07g33310 | Os07g0516600 | - | Detail |
| C1H7g22367 | 7:16,509,033-16,513,349 | + | C2H7g27434 | CX7g048850 | LOC_Os07g33330 | Os07g0516900 | - | Detail |
| C1H7g20402 | 7:16,516,549-16,519,046 | + | C2H7g03216 | CX7g048967 | LOC_Os03g08640 | Os03g0184700 | OsORC2 | Detail |
| C1H7g16327 | 7:16,521,500-16,525,220 | - | C2H7g09769 | CX7g050010 | LOC_Os07g33340 | Os07g0517000 | - | Detail |
| C1H7g09809 | 7:16,528,866-16,529,460 | + | C2H7g18778 | CX7g048211 | LOC_Os07g33350 | Os07g0517100 | - | Detail |
| C1H7g30752 | 7:16,531,278-16,535,976 | + | C2H7g19466 | CX7g049562 | LOC_Os07g33360 | Os07g0517300 | - | Detail |
| C1H7g17053 | 7:16,536,795-16,543,823 | - | C2H7g25127 | CX7g050417 | LOC_Os07g33370 | Os07g0517400 | - | Detail |
| C1H7g05717 | 7:16,548,625-16,550,389 | + | C2H7g25007 | CX7g050314 | LOC_Os07g33390 | Os07g0517600 | OsAAA-ATPase6 | Detail |
| C1H7g14811 | 7:16,551,633-16,552,954 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g08416 | 1:27,925,685-27,929,922 | + | C1H1g06199 | CX1g005528 | LOC_Os01g54515 | Os01g0748950 | OsNPF4.5 | Detail |
| C2H1g22814 | 1:27,930,437-27,931,290 | + | C1H1g21519 | CX1g000885 | LOC_Os01g54520 | Os01g0749000 | - | Detail |
| C2H1g20660 | 1:27,932,265-27,934,722 | + | C1H1g06931 | CX1g004193 | LOC_Os01g54530 | Os01g0749100 | - | Detail |
| C2H1g21635 | 1:27,935,519-27,937,890 | + | C1H1g02075 | CX1g000277 | LOC_Os01g54540 | Os01g0749200 | WLP1, cp rpl13, cp RPL13 | Detail |
| C2H1g02265 | 1:27,938,809-27,941,059 | + | C1H1g00896 | CX1g005465 | LOC_Os01g54550 | Os01g0749300 | HSFA4A, OsHsfA4a, OsHsfA4b, OsHsf-04, HSFA4B, HSF04, OsHSF9, RHSF9, HSF9 | Detail |
| C2H1g14114 | 1:27,942,037-27,946,129 | - | C1H1g09179 | CX1g003457 | LOC_Os01g54560 | Os01g0749400 | - | Detail |
| C2H1g10922 | 1:27,965,504-27,970,673 | + | C1H1g19262 | CX1g003630 | LOC_Os01g54580 | Os01g0749900 | - | Detail |
| C2H1g29233 | 1:27,974,220-27,977,908 | + | C1H1g17809 | CX1g000465 | LOC_Os01g54590 | Os01g0750000 | - | Detail |
| C2H1g09211 | 1:27,980,401-27,982,082 | - | C1H1g24495 | CX1g004996 | LOC_Os01g54600 | Os01g0750100 | WRKY13, OsWRKY13 | Detail |
| C2H1g25863 | 1:27,992,124-27,997,821 | + | C1H1g00277 | CX1g006527 | LOC_Os01g54620 | Os01g0750300 | - | Detail |
| C2H1g29243 | 1:28,006,149-28,009,921 | - | C1H1g12537 | - | LOC_Os01g54670 | Os01g0750500 | - | Detail |
| C2H1g03544 | 1:28,014,717-28,018,126 | - | C1H1g02730 | CX1g001248 | LOC_Os01g54700 | Os01g0750600 | - | Detail |
| C2H1g05225 | 1:28,029,339-28,029,912 | - | C1H1g08638 | CX1g000813 | LOC_Os01g53140 | Os01g0750800 | - | Detail |
| C2H1g04914 | 1:28,043,850-28,051,886 | + | C1H1g18828 | CX1g006345 | LOC_Os01g54784 | Os01g0751300 | - | Detail |
| C2H1g10063 | 1:28,056,456-28,059,326 | - | C1H1g01340 | CX1g003213 | LOC_Os01g54810 | Os01g0751600 | THIS1, This1 | Detail |
| C2H1g08663 | 1:28,061,852-28,063,890 | + | C1H1g28508 | CX1g001241 | LOC_Os01g54850 | Os01g0752100 | - | Detail |
| C2H1g27818 | 1:28,064,022-28,068,139 | - | C1H1g19975 | CX1g002849 | LOC_Os01g54860 | Os01g0752200 | NOG1 | Detail |
| C2H1g21432 | 1:28,070,490-28,072,113 | - | C1H1g04449 | CX1g004206 | LOC_Os01g54870 | Os01g0752300 | - | Detail |
| C2H1g04122 | 1:28,073,615-28,076,043 | - | C1H1g25368 | CX1g006705 | LOC_Os01g54880 | Os01g0752400 | - | Detail |
| C2H1g02082 | 1:28,080,846-28,086,760 | - | C1H1g06182 | CX1g007206 | LOC_Os01g54900 | Os01g0752600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |