| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09802 | 1:27,367,711-27,375,588 | + | C2H1g19534 | CX1g004251 | LOC_Os01g53294 | Os01g0734200 | OsRbohA, OsNOX2 | Detail |
| C1H1g03864 | 1:27,377,917-27,378,810 | - | - | CX1g001402 | - | - | - | Detail |
| C1H1g16727 | 1:27,390,048-27,391,484 | + | C2H1g09241 | CX1g003337 | LOC_Os01g53350 | Os01g0734800 | - | Detail |
| C1H1g17596 | 1:27,402,036-27,403,511 | + | C2H1g27577 | CX1g000021 | LOC_Os01g53370 | Os01g0735300 | - | Detail |
| C1H1g12410 | 1:27,423,630-27,425,060 | - | C2H1g28000 | CX1g004334 | LOC_Os01g53420 | Os01g0735900 | - | Detail |
| C1H1g11199 | 1:27,430,155-27,431,579 | - | C2H1g03039 | CX1g005230 | LOC_Os01g53430 | Os01g0736100 | - | Detail |
| C1H1g10989 | 1:27,439,124-27,440,539 | - | C2H1g19693 | CX1g005230 | LOC_Os01g53460 | Os01g0736300 | OsUGT706D1 | Detail |
| C1H1g04228 | 1:27,440,820-27,444,367 | + | C2H1g23129 | CX1g005942 | LOC_Os01g53450 | Os01g0736400 | - | Detail |
| C1H1g11257 | 1:27,445,725-27,446,477 | + | C2H1g09664 | CX1g003434 | LOC_Os01g53470 | Os01g0736500 | - | Detail |
| C1H1g18188 | 1:27,461,175-27,463,166 | + | C2H1g22559 | CX1g003962 | LOC_Os01g53520 | Os01g0736900 | - | Detail |
| C1H1g17501 | 1:27,473,848-27,479,224 | + | C2H1g29848 | CX1g006682 | LOC_Os01g53560 | Os01g0737300 | - | Detail |
| C1H1g26053 | 1:27,485,298-27,487,538 | + | C2H1g23141 | CX1g007234 | LOC_Os01g53570 | Os01g0737500 | - | Detail |
| C1H1g28789 | 1:27,493,976-27,494,602 | + | C2H1g28481 | CX1g001301 | LOC_Os01g53590 | Os01g0737700 | - | Detail |
| C1H1g20246 | 1:27,496,365-27,500,643 | - | C2H1g06822 | CX1g004371 | LOC_Os01g53600 | Os01g0737800 | OsERA1, OsERA1.1, OsPFT-β | Detail |
| C1H1g10368 | 1:27,500,714-27,504,048 | + | C2H1g22933 | CX1g003960 | LOC_Os01g53610 | Os01g0737900 | DYW3 | Detail |
| C1H1g29380 | 1:27,505,981-27,507,556 | + | C2H1g30197 | CX1g007226 | LOC_Os01g53620 | Os01g0738000 | - | Detail |
| C1H1g12561 | 1:27,508,849-27,516,184 | - | C2H1g26273 | CX1g002866 | LOC_Os01g53630 | Os01g0738100 | - | Detail |
| C1H1g20235 | 1:27,533,651-27,540,451 | + | C2H1g06044 | CX1g000101 | LOC_Os01g53640 | Os01g0738300 | - | Detail |
| C1H1g20301 | 1:27,548,869-27,552,506 | + | C2H1g19036 | CX1g001943 | LOC_Os01g53660 | Os01g0738500 | - | Detail |
| C1H1g10504 | 1:27,553,198-27,556,755 | + | C2H1g22385 | CX1g000533 | LOC_Os01g53670 | Os01g0738600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02997 | 1:12,233,616-12,239,615 | + | C1H1g02190 | CX1g000047 | LOC_Os01g24680 | Os01g0348600 | - | Detail |
| C2H1g13094 | 1:12,242,301-12,243,912 | + | C1H1g22060 | CX1g006528 | LOC_Os01g24690 | Os01g0348700 | - | Detail |
| C2H1g24178 | 1:12,246,421-12,246,663 | - | C1H1g28108 | CX1g002294 | LOC_Os01g25280 | Os01g0348800 | - | Detail |
| C2H1g30396 | 1:12,253,254-12,253,788 | - | C1H1g00208 | CX1g002294 | LOC_Os01g24710 | Os01g0348900 | OsJRL, OsMBL1, OsSalt | Detail |
| C2H1g24096 | 1:12,270,705-12,275,657 | - | C1H1g16274 | CX1g004857 | LOC_Os01g24750 | Os01g0349400 | - | Detail |
| C2H1g13316 | 1:12,289,183-12,292,326 | + | C1H1g27046 | CX1g000662 | LOC_Os01g24780 | Os01g0349800 | - | Detail |
| C2H1g08931 | 1:12,438,143-12,442,353 | - | C1H1g11336 | CX1g001694 | LOC_Os01g24820 | Os01g0350300 | - | Detail |
| C2H1g21333 | 1:12,460,738-12,468,533 | + | C1H1g00555 | CX1g002860 | LOC_Os01g24880 | Os01g0350900 | IPI1 | Detail |
| C2H1g14607 | 1:12,476,204-12,482,396 | + | C1H1g05982 | CX1g005272 | LOC_Os01g24940 | Os01g0351100 | - | Detail |
| C2H1g09806 | 1:12,493,810-12,500,200 | + | C1H1g06101 | CX1g000433 | LOC_Os01g24940 | Os01g0351200 | - | Detail |
| C2H1g18699 | 1:12,517,727-12,518,452 | - | C1H1g24498 | CX1g006080 | LOC_Os01g24960 | Os01g0351500 | - | Detail |
| C2H1g23303 | 1:12,524,550-12,527,499 | + | C1H1g12342 | CX1g002020 | LOC_Os01g24980 | Os01g0351800 | - | Detail |
| C2H1g18138 | 1:12,531,480-12,534,702 | + | C1H1g19518 | CX1g002475 | LOC_Os01g25010 | Os01g0352100 | - | Detail |
| C2H1g07713 | 1:12,560,452-12,560,833 | + | C1H1g19827 | CX1g006850 | - | - | - | Detail |
| C2H1g05879 | 1:12,560,881-12,563,018 | + | C1H1g05990 | CX1g006850 | - | Os01g0750100 | WRKY13, OsWRKY13 | Detail |
| C2H1g07698 | 1:12,589,870-12,590,804 | + | C1H1g16000 | CX1g003259 | LOC_Os01g25100 | Os01g0353400 | OsGST4 | Detail |
| C2H1g26082 | 1:12,595,884-12,598,643 | + | C1H1g26956 | CX1g006645 | LOC_Os01g25110 | Os01g0353600 | - | Detail |
| C2H1g07502 | 1:12,600,023-12,601,880 | + | - | - | - | - | - | Detail |
| C2H1g18726 | 1:12,605,357-12,605,733 | + | - | - | - | - | - | Detail |
| C2H1g28232 | 1:12,643,628-12,644,232 | - | C1H1g21653 | CX1g000417 | LOC_Os01g25160 | Os01g0348900 | OsJRL, OsMBL1, OsSalt | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |