| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09802 | 1:27,367,711-27,375,588 | + | C2H1g19534 | CX1g004251 | LOC_Os01g53294 | Os01g0734200 | OsRbohA, OsNOX2 | Detail |
| C1H1g03864 | 1:27,377,917-27,378,810 | - | - | CX1g001402 | - | - | - | Detail |
| C1H1g16727 | 1:27,390,048-27,391,484 | + | C2H1g09241 | CX1g003337 | LOC_Os01g53350 | Os01g0734800 | - | Detail |
| C1H1g17596 | 1:27,402,036-27,403,511 | + | C2H1g27577 | CX1g000021 | LOC_Os01g53370 | Os01g0735300 | - | Detail |
| C1H1g12410 | 1:27,423,630-27,425,060 | - | C2H1g28000 | CX1g004334 | LOC_Os01g53420 | Os01g0735900 | - | Detail |
| C1H1g11199 | 1:27,430,155-27,431,579 | - | C2H1g03039 | CX1g005230 | LOC_Os01g53430 | Os01g0736100 | - | Detail |
| C1H1g10989 | 1:27,439,124-27,440,539 | - | C2H1g19693 | CX1g005230 | LOC_Os01g53460 | Os01g0736300 | OsUGT706D1 | Detail |
| C1H1g04228 | 1:27,440,820-27,444,367 | + | C2H1g23129 | CX1g005942 | LOC_Os01g53450 | Os01g0736400 | - | Detail |
| C1H1g11257 | 1:27,445,725-27,446,477 | + | C2H1g09664 | CX1g003434 | LOC_Os01g53470 | Os01g0736500 | - | Detail |
| C1H1g18188 | 1:27,461,175-27,463,166 | + | C2H1g22559 | CX1g003962 | LOC_Os01g53520 | Os01g0736900 | - | Detail |
| C1H1g17501 | 1:27,473,848-27,479,224 | + | C2H1g29848 | CX1g006682 | LOC_Os01g53560 | Os01g0737300 | - | Detail |
| C1H1g26053 | 1:27,485,298-27,487,538 | + | C2H1g23141 | CX1g007234 | LOC_Os01g53570 | Os01g0737500 | - | Detail |
| C1H1g28789 | 1:27,493,976-27,494,602 | + | C2H1g28481 | CX1g001301 | LOC_Os01g53590 | Os01g0737700 | - | Detail |
| C1H1g20246 | 1:27,496,365-27,500,643 | - | C2H1g06822 | CX1g004371 | LOC_Os01g53600 | Os01g0737800 | OsERA1, OsERA1.1, OsPFT-β | Detail |
| C1H1g10368 | 1:27,500,714-27,504,048 | + | C2H1g22933 | CX1g003960 | LOC_Os01g53610 | Os01g0737900 | DYW3 | Detail |
| C1H1g29380 | 1:27,505,981-27,507,556 | + | C2H1g30197 | CX1g007226 | LOC_Os01g53620 | Os01g0738000 | - | Detail |
| C1H1g12561 | 1:27,508,849-27,516,184 | - | C2H1g26273 | CX1g002866 | LOC_Os01g53630 | Os01g0738100 | - | Detail |
| C1H1g20235 | 1:27,533,651-27,540,451 | + | C2H1g06044 | CX1g000101 | LOC_Os01g53640 | Os01g0738300 | - | Detail |
| C1H1g20301 | 1:27,548,869-27,552,506 | + | C2H1g19036 | CX1g001943 | LOC_Os01g53660 | Os01g0738500 | - | Detail |
| C1H1g10504 | 1:27,553,198-27,556,755 | + | C2H1g22385 | CX1g000533 | LOC_Os01g53670 | Os01g0738600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g16455 | 12:1,307,270-1,310,449 | - | C1H12g17444 | CX12g015059 | LOC_Os12g03750 | Os12g0131701 | - | Detail |
| C2H12g17528 | 12:1,323,355-1,329,415 | + | C1H12g22988 | CX12g018100 | LOC_Os12g03740 | Os12g0131400 | - | Detail |
| C2H12g18228 | 12:1,335,408-1,335,776 | + | C1H12g22988 | CX12g018100 | LOC_Os12g03740 | Os12g0131400 | - | Detail |
| C2H12g09331 | 12:1,353,929-1,356,251 | - | C1H12g17444 | CX12g015059 | LOC_Os12g03750 | Os12g0489800 | - | Detail |
| C2H12g26837 | 12:1,406,318-1,407,200 | + | C1H12g14356 | - | - | - | - | Detail |
| C2H12g25798 | 12:1,407,332-1,407,538 | + | C1H12g18819 | CX12g016220 | - | - | - | Detail |
| C2H12g21094 | 12:1,407,673-1,408,008 | + | C1H12g26172 | CX12g016173 | LOC_Os12g06930 | - | - | Detail |
| C2H12g15851 | 12:1,431,997-1,437,223 | - | C1H12g09635 | CX12g017965 | LOC_Os12g03720 | Os12g0131150 | - | Detail |
| C2H12g29504 | 12:1,440,101-1,442,926 | + | C1H12g19116 | CX12g017842 | LOC_Os12g03730 | Os12g0131200 | - | Detail |
| C2H12g21923 | 12:1,443,466-1,444,099 | - | C1H12g05970 | CX12g016235 | LOC_Os11g03920 | Os12g0131266 | - | Detail |
| C2H12g30346 | 12:1,444,109-1,444,675 | - | C1H12g16146 | - | - | - | - | Detail |
| C2H12g04882 | 12:1,445,115-1,450,348 | - | C1H12g22049 | CX12g015993 | LOC_Os12g03790 | Os12g0131900 | - | Detail |
| C2H12g26793 | 12:1,458,830-1,463,931 | + | C1H12g27375 | CX12g015231 | LOC_Os12g03810 | Os12g0132200 | - | Detail |
| C2H12g09084 | 12:1,460,509-1,464,915 | - | C1H12g17838 | CX12g016449 | LOC_Os12g03816 | Os12g0132300 | OsCML3 | Detail |
| C2H12g06878 | 12:1,466,000-1,469,957 | - | C1H12g18740 | CX12g016015 | LOC_Os12g03822 | Os12g0132400 | OsRIP1 | Detail |
| C2H12g15683 | 12:1,470,891-1,471,272 | - | C1H12g16357 | CX12g015235 | - | - | - | Detail |
| C2H12g25753 | 12:1,476,656-1,481,074 | - | C1H12g09294 | - | LOC_Os12g03830 | Os12g0132500 | - | Detail |
| C2H12g10240 | 12:1,485,214-1,489,768 | - | C1H12g05342 | - | LOC_Os12g03860 | Os12g0132800 | - | Detail |
| C2H12g14231 | 12:1,495,216-1,496,581 | + | C1H12g05091 | - | - | Os12g0132900 | - | Detail |
| C2H12g02432 | 12:1,497,080-1,502,175 | - | C1H12g13868 | - | LOC_Os12g03870 | Os12g0133000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |