| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g17450 | 7:14,892,564-14,896,131 | + | C2H7g08443 | CX7g046292 | LOC_Os07g30110 | Os07g0484500 | - | Detail |
| C1H7g29847 | 7:14,899,099-14,906,423 | - | C2H7g28168 | - | LOC_Os07g30150 | Os07g0484800 | - | Detail |
| C1H7g20780 | 7:14,911,617-14,912,936 | - | C2H7g17517 | - | LOC_Os07g30150 | Os07g0484800 | - | Detail |
| C1H7g14423 | 7:14,926,093-14,928,076 | + | C2H7g13834 | CX7g047351 | LOC_Os07g30160 | Os07g0485000 | - | Detail |
| C1H7g26216 | 7:14,928,332-14,931,511 | - | C2H7g08877 | CX7g048078 | LOC_Os07g30170 | Os07g0485100 | Osb-UP, Osbeta-UP, Osβ-UP | Detail |
| C1H7g15618 | 7:14,935,189-14,939,751 | + | - | - | LOC_Os07g30480 | - | - | Detail |
| C1H7g07367 | 7:14,940,359-14,941,740 | + | C2H7g20794 | CX7g046479 | LOC_Os07g32910 | - | - | Detail |
| C1H7g17380 | 7:14,943,996-14,950,071 | + | C2H7g13444 | CX7g046682 | LOC_Os07g30200 | Os07g0485400 | - | Detail |
| C1H7g26491 | 7:14,950,629-14,954,058 | - | C2H7g07219 | CX7g048279 | LOC_Os07g30210 | Os07g0485500 | - | Detail |
| C1H7g03824 | 7:14,956,974-14,957,721 | - | C2H7g22225 | CX7g046022 | LOC_Os07g30220 | Os07g0485600 | - | Detail |
| C1H7g24847 | 7:14,969,403-14,979,084 | + | C2H7g21520 | CX7g050000 | LOC_Os07g30240 | Os07g0486000 | OsMSH4, MSH4 | Detail |
| C1H7g29218 | 7:14,980,635-14,990,660 | - | C2H7g19758 | CX7g046844 | LOC_Os07g30250 | Os07g0486100 | - | Detail |
| C1H7g25507 | 7:15,002,083-15,002,360 | - | - | - | - | - | - | Detail |
| C1H7g05089 | 7:15,008,848-15,012,586 | + | C2H7g15831 | CX7g048234 | LOC_Os07g30300 | Os07g0486500 | - | Detail |
| C1H7g27764 | 7:15,024,994-15,026,627 | + | C2H7g01745 | CX7g047811 | LOC_Os07g30330 | Os07g0486700 | - | Detail |
| C1H7g18415 | 7:15,037,539-15,039,002 | + | C2H7g16403 | CX7g046528 | LOC_Os07g30469 | Os07g0489950 | - | Detail |
| C1H7g06352 | 7:15,051,546-15,055,734 | - | C2H7g12584 | CX7g046748 | LOC_Os07g30510 | Os07g0487300 | - | Detail |
| C1H7g11935 | 7:15,073,106-15,073,975 | - | C2H7g08605 | CX7g047870 | LOC_Os07g30590 | Os07g0489000 | - | Detail |
| C1H7g07877 | 7:15,077,083-15,081,579 | + | C2H7g27638 | CX7g049896 | LOC_Os07g30600 | Os07g0489100 | OsFAR7 | Detail |
| C1H7g28780 | 7:15,103,633-15,105,638 | - | - | - | - | Os07g0489500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g27058 | 1:22,384,772-22,386,355 | - | C1H1g11259 | CX1g001039 | LOC_Os01g43550 | Os01g0624700 | OsWRKY03, OsWRKY12 | Detail |
| C2H1g20706 | 1:22,397,701-22,401,939 | + | C1H1g00319 | CX1g003323 | LOC_Os01g43580 | Os01g0625200 | - | Detail |
| C2H1g04036 | 1:22,406,624-22,407,725 | + | C1H1g14466 | CX1g003980 | LOC_Os01g43590 | Os01g0625300 | - | Detail |
| C2H1g20132 | 1:22,418,099-22,418,914 | + | C1H1g26404 | - | - | - | - | Detail |
| C2H1g15171 | 1:22,428,869-22,431,655 | - | C1H1g17074 | - | LOC_Os01g43620 | - | - | Detail |
| C2H1g15343 | 1:22,435,613-22,436,006 | - | C1H1g17074 | - | - | - | - | Detail |
| C2H1g29248 | 1:22,436,126-22,444,816 | + | C1H1g10500 | CX1g004459 | LOC_Os01g43630 | Os01g0626200 | - | Detail |
| C2H1g04282 | 1:22,445,801-22,446,416 | - | C1H1g23387 | CX1g003074 | - | Os01g0626300 | - | Detail |
| C2H1g17198 | 1:22,451,007-22,453,241 | + | C1H1g04034 | CX1g001615 | LOC_Os01g43650 | Os01g0626400 | WRKY11, OsWRKY11.2 | Detail |
| C2H1g05125 | 1:22,463,980-22,466,094 | + | C1H1g09859 | CX1g004444 | LOC_Os01g43670 | Os01g0155000 | - | Detail |
| C2H1g12925 | 1:22,468,084-22,476,525 | - | - | - | - | - | - | Detail |
| C2H1g04147 | 1:22,476,887-22,479,774 | + | C1H1g01575 | CX1g002724 | LOC_Os01g43700 | Os01g0627400 | - | Detail |
| C2H1g19850 | 1:22,481,631-22,485,305 | - | C1H1g28702 | CX1g002724 | LOC_Os01g43710 | Os01g0627500 | - | Detail |
| C2H1g29868 | 1:22,492,974-22,494,961 | - | C1H1g03097 | CX1g006577 | LOC_Os01g43720 | Os01g0627600 | - | Detail |
| C2H1g22502 | 1:22,498,248-22,502,159 | + | C1H1g04951 | CX1g002724 | LOC_Os01g43740 | Os01g0627800 | - | Detail |
| C2H1g27924 | 1:22,505,575-22,507,478 | + | C1H1g09293 | CX1g005051 | LOC_Os01g43750 | Os01g0627900 | - | Detail |
| C2H1g24978 | 1:22,509,995-22,511,966 | + | C1H1g25990 | CX1g005051 | LOC_Os01g43750 | Os01g0627900 | - | Detail |
| C2H1g07157 | 1:22,515,681-22,517,744 | + | C1H1g21900 | CX1g006577 | LOC_Os01g43774 | Os01g0628000 | - | Detail |
| C2H1g04659 | 1:22,534,549-22,538,745 | + | C1H1g21541 | CX1g003827 | LOC_Os01g43844 | Os01g0628700 | - | Detail |
| C2H1g09539 | 1:22,540,668-22,542,685 | + | C1H1g06376 | CX1g003827 | LOC_Os01g43851 | Os01g0628900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |