| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g30743 | 7:12,825,064-12,828,741 | - | C2H7g26716 | CX7g047444 | LOC_Os07g26560 | Os07g0447000 | - | Detail |
| C1H7g11360 | 7:12,831,973-12,833,804 | - | C2H7g28153 | - | - | - | - | Detail |
| C1H7g10421 | 7:12,860,457-12,874,392 | + | C2H7g16004 | CX7g046302 | LOC_Os07g26610 | Os07g0447800 | - | Detail |
| C1H7g19669 | 7:12,879,165-12,880,244 | + | C2H7g29828 | CX7g047860 | LOC_Os07g26630 | Os07g0448100 | OsPIP2;4 | Detail |
| C1H7g02013 | 7:12,894,070-12,895,112 | + | C2H7g04872 | CX7g048399 | LOC_Os07g26630 | Os07g0448100 | OsPIP2;4 | Detail |
| C1H7g13570 | 7:12,901,783-12,902,963 | + | C2H7g25955 | CX7g049385 | LOC_Os07g26660 | Os07g0448100 | OsPIP2;4 | Detail |
| C1H7g11593 | 7:12,939,597-12,944,456 | + | C2H7g26880 | CX7g049950 | LOC_Os07g26690 | Os07g0448800 | - | Detail |
| C1H7g07851 | 7:12,953,020-12,954,405 | - | C2H7g23663 | CX7g050322 | LOC_Os07g26700 | Os07g0449100 | - | Detail |
| C1H7g22458 | 7:12,978,857-12,980,325 | + | C2H7g19396 | CX7g049783 | LOC_Os07g26720 | Os07g0449700 | RR7, rr7, OsRR7, Rra5, OsRRA5 | Detail |
| C1H7g16744 | 7:12,980,935-12,981,264 | - | C2H7g02938 | - | - | - | - | Detail |
| C1H7g28009 | 7:12,981,623-12,983,687 | - | C2H7g02938 | CX7g046951 | LOC_Os07g26730 | Os07g0481400 | - | Detail |
| C1H7g28266 | 7:12,985,596-12,988,109 | + | C2H7g11079 | CX7g049510 | LOC_Os07g26740 | Os07g0450000 | - | Detail |
| C1H7g22365 | 7:13,086,965-13,088,515 | + | C2H7g10439 | CX7g047342 | LOC_Os07g26870 | Os07g0451300 | - | Detail |
| C1H7g00534 | 7:13,096,061-13,097,594 | + | C2H7g29545 | CX7g047774 | LOC_Os07g26870 | Os07g0451300 | - | Detail |
| C1H7g02317 | 7:13,102,563-13,104,785 | + | C2H7g21721 | CX7g047554 | LOC_Os07g26900 | Os07g0452100 | - | Detail |
| C1H7g04565 | 7:13,108,090-13,109,177 | + | C2H7g21721 | CX7g047554 | LOC_Os07g26900 | Os07g0452100 | - | Detail |
| C1H7g17151 | 7:13,114,385-13,120,817 | + | C2H7g10448 | CX7g046832 | LOC_Os07g26930 | Os07g0452400 | - | Detail |
| C1H7g09551 | 7:13,123,077-13,125,025 | - | C2H7g28483 | CX7g049661 | LOC_Os07g26940 | Os07g0452500 | - | Detail |
| C1H7g14083 | 7:13,132,131-13,134,508 | + | C2H7g00694 | CX7g047726 | LOC_Os07g26960 | Os07g0452600 | - | Detail |
| C1H7g17102 | 7:13,137,995-13,139,962 | - | C2H7g23804 | CX7g047550 | LOC_Os07g26974 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g23962 | 3:8,134,713-8,139,261 | + | C1H3g08484 | CX3g026595 | LOC_Os03g16790 | Os03g0275400 | - | Detail |
| C2H3g22357 | 3:8,140,834-8,143,728 | - | C1H3g29048 | CX3g028725 | LOC_Os03g16800 | Os03g0275500 | - | Detail |
| C2H3g09736 | 3:8,154,560-8,160,033 | + | C1H3g28405 | CX3g030952 | LOC_Os03g16824 | Os03g0275900 | - | Detail |
| C2H3g10703 | 3:8,186,051-8,187,519 | - | C1H3g20662 | CX3g029620 | LOC_Os03g16850 | Os03g0276300 | - | Detail |
| C2H3g25748 | 3:8,197,971-8,201,391 | + | C1H3g15079 | CX3g026076 | LOC_Os03g16860 | Os03g0276500 | - | Detail |
| C2H3g05747 | 3:8,201,710-8,204,167 | - | C1H3g15631 | CX3g028681 | LOC_Os03g16870 | Os03g0276600 | - | Detail |
| C2H3g19968 | 3:8,204,306-8,205,868 | + | C1H3g26015 | CX3g027299 | LOC_Os03g16874 | Os03g0276700 | - | Detail |
| C2H3g18002 | 3:8,206,382-8,209,071 | - | C1H3g30543 | CX3g030385 | LOC_Os03g16880 | Os03g0276800 | - | Detail |
| C2H3g17099 | 3:8,209,631-8,213,794 | - | C1H3g16525 | CX3g030171 | LOC_Os03g16890 | Os03g0276900 | - | Detail |
| C2H3g11000 | 3:8,218,235-8,221,421 | - | C1H3g14663 | CX3g026295 | LOC_Os03g16900 | Os03g0277000 | OsGDI3 | Detail |
| C2H3g13683 | 3:8,227,829-8,229,448 | + | C1H3g00724 | CX3g025051 | LOC_Os03g16910 | Os03g0277100 | - | Detail |
| C2H3g22367 | 3:8,238,699-8,241,299 | - | C1H3g31204 | CX3g029302 | LOC_Os03g16920 | Os03g0277300 | - | Detail |
| C2H3g30326 | 3:8,242,860-8,243,777 | - | C1H3g02748 | CX3g028405 | - | - | - | Detail |
| C2H3g22094 | 3:8,243,931-8,244,684 | - | C1H3g11982 | CX3g027598 | LOC_Os03g16940 | Os03g0277500 | OsGLYI3 | Detail |
| C2H3g14605 | 3:8,247,137-8,247,962 | - | C1H3g12989 | CX3g029379 | LOC_Os03g16950 | Os03g0277600 | - | Detail |
| C2H3g07396 | 3:8,251,225-8,252,038 | - | C1H3g21064 | CX3g026822 | LOC_Os03g16960 | Os03g0277700 | - | Detail |
| C2H3g01539 | 3:8,259,009-8,263,113 | + | C1H3g04687 | CX3g030561 | LOC_Os03g16980 | Os03g0278000 | - | Detail |
| C2H3g08917 | 3:8,267,489-8,270,953 | + | C1H3g07237 | CX3g025505 | LOC_Os03g17000 | Os03g0278200 | - | Detail |
| C2H3g03680 | 3:8,271,660-8,275,193 | - | C1H3g25194 | CX3g027017 | LOC_Os03g17010 | Os03g0278300 | - | Detail |
| C2H3g05174 | 3:8,278,011-8,280,761 | - | C1H3g03328 | CX3g030797 | LOC_Os03g17020 | Os03g0278400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |