| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g02385 | 7:11,196,794-11,204,148 | - | C2H7g00323 | CX7g050392 | LOC_Os07g22930 | Os07g0412100 | GBSSII | Detail |
| C1H7g16098 | 7:11,220,230-11,224,501 | + | C2H7g00343 | CX7g049378 | LOC_Os07g22950 | Os07g0412400 | - | Detail |
| C1H7g14122 | 7:11,234,966-11,245,721 | + | C2H7g23690 | CX7g046574 | LOC_Os07g23110 | Os07g0413700 | OsPARP1.2 | Detail |
| C1H7g01723 | 7:11,272,649-11,274,530 | - | C2H7g14967 | CX7g049331 | - | - | - | Detail |
| C1H7g00813 | 7:11,280,341-11,280,968 | - | - | - | LOC_Os07g23169 | Os07g0414200 | - | Detail |
| C1H7g08046 | 7:11,282,942-11,283,808 | - | C2H7g21406 | - | LOC_Os07g23169 | Os07g0414200 | - | Detail |
| C1H7g21170 | 7:11,291,424-11,294,863 | - | C2H7g03535 | CX7g046357 | LOC_Os07g23200 | Os07g0414800 | - | Detail |
| C1H7g06845 | 7:11,298,951-11,299,544 | + | C2H7g27860 | CX7g048434 | LOC_Os07g23244 | Os07g0415200 | - | Detail |
| C1H7g19938 | 7:11,303,018-11,303,613 | + | - | - | LOC_Os07g23244 | Os07g0415200 | - | Detail |
| C1H7g13544 | 7:11,343,107-11,345,420 | + | C2H7g22446 | - | - | - | - | Detail |
| C1H7g11173 | 7:11,370,665-11,373,244 | - | C2H7g11050 | CX7g049896 | LOC_Os07g23340 | Os07g0416050 | OsFAR6 | Detail |
| C1H7g29354 | 7:11,384,556-11,385,195 | - | C2H7g04508 | CX7g049896 | LOC_Os07g23380 | Os07g0416600 | - | Detail |
| C1H7g02694 | 7:11,390,674-11,392,444 | - | C2H7g05825 | CX7g047817 | LOC_Os07g23390 | Os07g0416700 | - | Detail |
| C1H7g02368 | 7:11,392,562-11,393,472 | + | C2H7g07067 | - | - | - | - | Detail |
| C1H7g06440 | 7:11,412,089-11,413,261 | - | C2H7g07136 | CX7g047817 | LOC_Os07g23410 | Os07g0416900 | - | Detail |
| C1H7g00627 | 7:11,458,096-11,459,717 | - | C2H7g28404 | CX7g046034 | LOC_Os07g23470 | Os07g0417600 | - | Detail |
| C1H7g06184 | 7:11,482,243-11,484,773 | - | C2H7g28793 | CX7g050279 | LOC_Os07g23494 | Os07g0417800 | - | Detail |
| C1H7g25340 | 7:11,489,162-11,495,854 | - | C2H7g06841 | CX7g047183 | LOC_Os07g23520 | Os07g0418000 | - | Detail |
| C1H7g11143 | 7:11,501,463-11,503,488 | + | C2H7g01445 | CX7g047536 | LOC_Os07g23550 | Os07g0418200 | - | Detail |
| C1H7g09186 | 7:11,511,208-11,513,231 | + | C2H7g23033 | CX7g048647 | LOC_Os07g23570 | Os07g0418500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g23293 | 9:17,237,498-17,241,720 | - | C1H9g12508 | CX9g056886 | LOC_Os09g34990 | Os09g0521800 | - | Detail |
| C2H9g12959 | 9:17,244,294-17,248,356 | + | C1H9g22775 | CX9g058042 | LOC_Os09g35000 | Os09g0521900 | RAD, OsGEN1, rad, rad*, OsRAD, GEN1, OsGEN-L | Detail |
| C2H9g15101 | 9:17,249,838-17,250,716 | + | - | - | - | - | - | Detail |
| C2H9g06843 | 9:17,263,090-17,263,671 | + | - | CX11g014678 | - | - | - | Detail |
| C2H9g00413 | 9:17,263,682-17,263,970 | + | - | - | - | - | - | Detail |
| C2H9g13075 | 9:17,315,214-17,317,637 | - | C1H9g22926 | CX9g057513 | LOC_Os09g35630 | Os09g0524800 | - | Detail |
| C2H9g25776 | 9:17,325,847-17,329,040 | + | C1H9g31662 | CX9g056603 | LOC_Os09g35670 | Os09g0525200 | - | Detail |
| C2H9g21918 | 9:17,329,621-17,332,264 | - | C1H9g25445 | CX9g055378 | LOC_Os09g35680 | Os09g0525300 | - | Detail |
| C2H9g18090 | 9:17,332,743-17,333,235 | + | - | - | - | - | - | Detail |
| C2H9g16534 | 9:17,336,698-17,341,474 | - | C1H9g08911 | CX9g058055 | LOC_Os09g35690 | Os09g0525400 | E3BB | Detail |
| C2H9g00761 | 9:17,342,206-17,342,619 | + | C1H9g02024 | CX9g057849 | LOC_Os09g35700 | Os09g0525500 | - | Detail |
| C2H9g16855 | 9:17,343,281-17,348,296 | - | C1H9g15317 | CX9g057451 | LOC_Os09g35710 | Os09g0525600 | - | Detail |
| C2H9g29379 | 9:17,350,467-17,356,488 | - | C1H9g29308 | CX9g057247 | LOC_Os09g35720 | Os09g0525700 | - | Detail |
| C2H9g07857 | 9:17,358,469-17,361,650 | - | C1H9g08625 | CX9g055034 | LOC_Os09g35730 | Os09g0525900 | - | Detail |
| C2H9g18140 | 9:17,365,844-17,367,855 | + | C1H9g31758 | CX9g054877 | LOC_Os09g35740 | - | - | Detail |
| C2H9g08359 | 9:17,379,953-17,386,025 | - | C1H9g21556 | CX9g057694 | LOC_Os09g35760 | Os09g0526300 | - | Detail |
| C2H9g23914 | 9:17,398,899-17,399,452 | - | C1H9g12923 | - | - | - | - | Detail |
| C2H9g25457 | 9:17,401,310-17,402,916 | - | C1H9g05187 | CX9g056876 | LOC_Os09g35790 | Os09g0526600 | - | Detail |
| C2H9g28414 | 9:17,408,099-17,410,200 | - | C1H9g15216 | CX9g055153 | LOC_Os09g35800 | Os09g0526700 | - | Detail |
| C2H9g05438 | 9:17,413,778-17,416,569 | - | C1H9g04329 | CX9g057418 | LOC_Os09g35810 | Os09g0526800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |