| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g02385 | 7:11,196,794-11,204,148 | - | C2H7g00323 | CX7g050392 | LOC_Os07g22930 | Os07g0412100 | GBSSII | Detail |
| C1H7g16098 | 7:11,220,230-11,224,501 | + | C2H7g00343 | CX7g049378 | LOC_Os07g22950 | Os07g0412400 | - | Detail |
| C1H7g14122 | 7:11,234,966-11,245,721 | + | C2H7g23690 | CX7g046574 | LOC_Os07g23110 | Os07g0413700 | OsPARP1.2 | Detail |
| C1H7g01723 | 7:11,272,649-11,274,530 | - | C2H7g14967 | CX7g049331 | - | - | - | Detail |
| C1H7g00813 | 7:11,280,341-11,280,968 | - | - | - | LOC_Os07g23169 | Os07g0414200 | - | Detail |
| C1H7g08046 | 7:11,282,942-11,283,808 | - | C2H7g21406 | - | LOC_Os07g23169 | Os07g0414200 | - | Detail |
| C1H7g21170 | 7:11,291,424-11,294,863 | - | C2H7g03535 | CX7g046357 | LOC_Os07g23200 | Os07g0414800 | - | Detail |
| C1H7g06845 | 7:11,298,951-11,299,544 | + | C2H7g27860 | CX7g048434 | LOC_Os07g23244 | Os07g0415200 | - | Detail |
| C1H7g19938 | 7:11,303,018-11,303,613 | + | - | - | LOC_Os07g23244 | Os07g0415200 | - | Detail |
| C1H7g13544 | 7:11,343,107-11,345,420 | + | C2H7g22446 | - | - | - | - | Detail |
| C1H7g11173 | 7:11,370,665-11,373,244 | - | C2H7g11050 | CX7g049896 | LOC_Os07g23340 | Os07g0416050 | OsFAR6 | Detail |
| C1H7g29354 | 7:11,384,556-11,385,195 | - | C2H7g04508 | CX7g049896 | LOC_Os07g23380 | Os07g0416600 | - | Detail |
| C1H7g02694 | 7:11,390,674-11,392,444 | - | C2H7g05825 | CX7g047817 | LOC_Os07g23390 | Os07g0416700 | - | Detail |
| C1H7g02368 | 7:11,392,562-11,393,472 | + | C2H7g07067 | - | - | - | - | Detail |
| C1H7g06440 | 7:11,412,089-11,413,261 | - | C2H7g07136 | CX7g047817 | LOC_Os07g23410 | Os07g0416900 | - | Detail |
| C1H7g00627 | 7:11,458,096-11,459,717 | - | C2H7g28404 | CX7g046034 | LOC_Os07g23470 | Os07g0417600 | - | Detail |
| C1H7g06184 | 7:11,482,243-11,484,773 | - | C2H7g28793 | CX7g050279 | LOC_Os07g23494 | Os07g0417800 | - | Detail |
| C1H7g25340 | 7:11,489,162-11,495,854 | - | C2H7g06841 | CX7g047183 | LOC_Os07g23520 | Os07g0418000 | - | Detail |
| C1H7g11143 | 7:11,501,463-11,503,488 | + | C2H7g01445 | CX7g047536 | LOC_Os07g23550 | Os07g0418200 | - | Detail |
| C1H7g09186 | 7:11,511,208-11,513,231 | + | C2H7g23033 | CX7g048647 | LOC_Os07g23570 | Os07g0418500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g09001 | 6:2,272,854-2,274,176 | + | C1H6g29479 | CX6g042252 | LOC_Os06g06300 | Os06g0157500 | RFT1, FT-L 3, OsFTL3, FT-L3, RFT | Detail |
| C2H6g08710 | 6:2,283,559-2,284,174 | + | C1H6g06407 | CX6g045894 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| C2H6g23992 | 6:2,285,513-2,285,704 | + | C1H6g09433 | CX6g045894 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| C2H6g09872 | 6:2,295,836-2,296,849 | + | C1H6g29691 | CX6g041455 | LOC_Os06g06330 | Os06g0157800 | - | Detail |
| C2H6g19375 | 6:2,298,392-2,298,872 | + | C1H6g13605 | CX6g043465 | LOC_Os06g06340 | Os06g0157900 | - | Detail |
| C2H6g03223 | 6:2,300,339-2,308,133 | + | C1H6g01052 | CX6g041165 | LOC_Os06g06350 | Os06g0158000 | - | Detail |
| C2H6g20805 | 6:2,310,236-2,313,536 | + | C1H6g08202 | CX6g041162 | LOC_Os06g06360 | Os06g0158100 | OsWRKY93, OsWRKY113 | Detail |
| C2H6g18246 | 6:2,315,896-2,322,693 | + | C1H6g28677 | CX6g044558 | LOC_Os06g06370 | Os06g0158200 | - | Detail |
| C2H6g22243 | 6:2,323,220-2,329,004 | - | C1H6g07185 | CX6g044801 | LOC_Os06g06380 | Os06g0158300 | - | Detail |
| C2H6g03461 | 6:2,331,239-2,335,093 | - | C1H6g00361 | CX6g045279 | LOC_Os06g06390 | Os06g0158400 | - | Detail |
| C2H6g12842 | 6:2,336,571-2,340,132 | - | C1H6g04562 | CX6g044801 | LOC_Os06g06400 | Os06g0158500 | - | Detail |
| C2H6g18686 | 6:2,343,271-2,345,920 | - | C1H6g29953 | CX6g045460 | LOC_Os06g06410 | Os06g0158600 | - | Detail |
| C2H6g03596 | 6:2,346,287-2,348,327 | + | C1H6g03313 | - | LOC_Os06g06420 | Os06g0158700 | - | Detail |
| C2H6g00327 | 6:2,349,466-2,350,395 | + | - | CX6g044562 | LOC_Os06g06430 | Os06g0158800 | - | Detail |
| C2H6g14590 | 6:2,351,239-2,361,917 | - | C1H6g02873 | CX6g041204 | LOC_Os06g06440 | Os06g0158900 | OsMRP15, OsABCC15, OsABCC15/MRP15 | Detail |
| C2H6g19286 | 6:2,385,093-2,388,696 | + | C1H6g15545 | CX6g044205 | LOC_Os06g06450 | Os06g0159400 | - | Detail |
| C2H6g12020 | 6:2,389,673-2,390,618 | - | C1H6g00179 | CX6g042400 | LOC_Os06g06510 | Os06g0160001 | - | Detail |
| C2H6g03704 | 6:2,391,602-2,395,602 | + | C1H6g14833 | CX6g044205 | LOC_Os06g06470 | Os06g0159600 | - | Detail |
| C2H6g15557 | 6:2,395,948-2,397,192 | - | C1H6g00179 | CX6g042400 | LOC_Os06g06510 | Os06g0159725 | - | Detail |
| C2H6g13339 | 6:2,405,010-2,408,929 | + | C1H6g29654 | CX6g041545 | LOC_Os06g06490 | Os06g0159900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |