| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g25727 | 7:8,559,858-8,563,055 | + | C2H7g30080 | CX7g046973 | LOC_Os07g17390 | Os07g0275100 | - | Detail |
| C1H7g20765 | 7:8,573,615-8,576,878 | - | C2H7g22609 | CX7g046776 | LOC_Os07g17400 | Os07g0275300 | - | Detail |
| C1H7g18810 | 7:8,619,015-8,624,214 | + | C2H7g06984 | CX7g047936 | LOC_Os07g18230 | Os07g0498400 | OsSGN3a | Detail |
| C1H7g03708 | 7:8,672,875-8,674,603 | - | C2H7g03890 | CX7g046914 | LOC_Os07g17460 | Os07g0276000 | - | Detail |
| C1H7g27351 | 7:8,699,450-8,701,679 | - | C2H7g30146 | CX7g046707 | LOC_Os07g17520 | Os07g0277000 | - | Detail |
| C1H7g30865 | 7:8,710,298-8,712,055 | + | C2H7g30257 | CX7g046332 | LOC_Os07g17680 | Os07g0277500 | - | Detail |
| C1H7g05240 | 7:8,718,971-8,722,348 | + | C2H7g11653 | CX7g048273 | LOC_Os07g17770 | - | - | Detail |
| C1H7g25746 | 7:8,776,470-8,784,017 | + | C2H7g05976 | CX7g049098 | LOC_Os07g17970 | Os07g0280200 | - | Detail |
| C1H7g21082 | 7:8,817,795-8,822,601 | + | C2H7g11138 | CX7g046332 | LOC_Os07g17680 | Os07g0277500 | - | Detail |
| C1H7g24749 | 7:8,873,164-8,877,628 | - | C2H7g07539 | CX7g048480 | LOC_Os07g18050 | Os07g0281000 | - | Detail |
| C1H7g05996 | 7:8,933,870-8,934,690 | + | C2H7g09106 | CX7g046996 | LOC_Os07g18120 | Os07g0281700 | OsAO3 | Detail |
| C1H7g08684 | 7:8,939,771-8,942,661 | - | - | - | LOC_Os06g16040 | Os06g0271400 | - | Detail |
| C1H7g19161 | 7:8,956,138-8,963,700 | + | C2H7g09106 | CX7g048801 | LOC_Os07g18120 | Os07g0282401 | - | Detail |
| C1H7g27136 | 7:9,010,812-9,026,259 | + | C2H7g07447 | CX7g048801 | LOC_Os07g18158 | Os07g0282401 | - | Detail |
| C1H7g16646 | 7:9,053,834-9,061,383 | - | C2H7g15640 | CX7g050317 | LOC_Os07g18250 | Os07g0283200 | - | Detail |
| C1H7g23704 | 7:9,094,961-9,101,167 | - | C2H7g16928 | CX7g046473 | LOC_Os07g18540 | Os07g0285200 | - | Detail |
| C1H7g27758 | 7:9,105,634-9,107,397 | - | - | - | - | - | - | Detail |
| C1H7g20862 | 7:9,107,431-9,108,217 | - | C2H7g16928 | CX7g049930 | LOC_Os07g18560 | Os07g0285700 | - | Detail |
| C1H7g25574 | 7:9,162,096-9,164,001 | - | C2H7g03963 | CX7g049930 | LOC_Os07g18670 | Os07g0285200 | - | Detail |
| C1H7g00852 | 7:9,183,351-9,184,777 | + | C2H7g24527 | CX7g048475 | LOC_Os07g18710 | Os07g0287000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g25606 | 3:5,617,924-5,626,626 | - | C1H3g11455 | CX3g031100 | LOC_Os03g12160 | Os03g0221800 | - | Detail |
| C2H3g28200 | 3:5,629,758-5,631,757 | - | C1H3g05328 | CX3g028642 | LOC_Os03g12180 | Os03g0222100 | - | Detail |
| C2H3g21744 | 3:5,655,861-5,657,114 | + | C1H3g10920 | - | LOC_Os03g12210 | Os03g0222500 | - | Detail |
| C2H3g09344 | 3:5,664,107-5,666,372 | + | C1H3g07232 | CX3g031317 | LOC_Os03g12230 | Os03g0222600 | - | Detail |
| C2H3g04698 | 3:5,668,849-5,673,629 | + | C1H3g04972 | CX3g028958 | LOC_Os03g12236 | Os03g0222700 | - | Detail |
| C2H3g19892 | 3:5,674,920-5,676,941 | + | C1H3g26972 | CX3g027447 | LOC_Os03g12238 | - | - | Detail |
| C2H3g10667 | 3:5,679,824-5,684,019 | + | C1H3g14957 | CX3g031278 | LOC_Os03g12250 | Os03g0223000 | - | Detail |
| C2H3g29015 | 3:5,690,854-5,692,440 | - | C1H3g14297 | CX3g030840 | LOC_Os03g12260 | Os03g0223100 | CYP94D15, OsCYP94D15 | Detail |
| C2H3g13113 | 3:5,697,671-5,700,203 | + | C1H3g13087 | CX3g029663 | LOC_Os03g12270 | Os03g0223200 | - | Detail |
| C2H3g16993 | 3:5,702,030-5,703,478 | - | C1H3g19225 | CX3g028859 | LOC_Os03g12290 | Os03g0223400 | GLN1;2, OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1 | Detail |
| C2H3g28472 | 3:5,703,831-5,706,150 | - | C1H3g05930 | CX3g028859 | LOC_Os03g12290 | Os03g0223400 | GLN1;2, OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1 | Detail |
| C2H3g01042 | 3:5,710,893-5,718,986 | - | C1H3g02751 | CX3g025777 | LOC_Os03g12300 | Os03g0223700 | - | Detail |
| C2H3g20060 | 3:5,730,175-5,734,820 | + | C1H3g05662 | CX3g029397 | LOC_Os03g12320 | Os03g0223900 | OsLPXC | Detail |
| C2H3g29213 | 3:5,743,380-5,748,702 | + | C1H3g16565 | CX3g029992 | LOC_Os03g12350 | Os03g0224200 | - | Detail |
| C2H3g11335 | 3:5,749,246-5,753,687 | - | C1H3g12418 | CX3g029383 | LOC_Os03g12360 | Os03g0224300 | - | Detail |
| C2H3g05885 | 3:5,765,625-5,769,411 | + | C1H3g18389 | CX3g025920 | LOC_Os03g12370 | Os03g0224700 | - | Detail |
| C2H3g25300 | 3:5,773,342-5,774,361 | - | C1H3g09012 | CX3g025136 | LOC_Os03g12390 | Os03g0225100 | MPKK10.2, OsMKK10-2, MKK10-2D | Detail |
| C2H3g05543 | 3:5,781,025-5,785,623 | - | C1H3g14793 | CX3g027495 | LOC_Os03g12414 | Os03g0225200 | - | Detail |
| C2H3g22350 | 3:5,787,025-5,788,437 | - | C1H3g12506 | CX3g027176 | LOC_Os03g12430 | Os03g0225300 | - | Detail |
| C2H3g21341 | 3:5,789,758-5,791,688 | + | C1H3g26939 | CX3g025280 | LOC_Os03g12440 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |