| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g25727 | 7:8,559,858-8,563,055 | + | C2H7g30080 | CX7g046973 | LOC_Os07g17390 | Os07g0275100 | - | Detail |
| C1H7g20765 | 7:8,573,615-8,576,878 | - | C2H7g22609 | CX7g046776 | LOC_Os07g17400 | Os07g0275300 | - | Detail |
| C1H7g18810 | 7:8,619,015-8,624,214 | + | C2H7g06984 | CX7g047936 | LOC_Os07g18230 | Os07g0498400 | OsSGN3a | Detail |
| C1H7g03708 | 7:8,672,875-8,674,603 | - | C2H7g03890 | CX7g046914 | LOC_Os07g17460 | Os07g0276000 | - | Detail |
| C1H7g27351 | 7:8,699,450-8,701,679 | - | C2H7g30146 | CX7g046707 | LOC_Os07g17520 | Os07g0277000 | - | Detail |
| C1H7g30865 | 7:8,710,298-8,712,055 | + | C2H7g30257 | CX7g046332 | LOC_Os07g17680 | Os07g0277500 | - | Detail |
| C1H7g05240 | 7:8,718,971-8,722,348 | + | C2H7g11653 | CX7g048273 | LOC_Os07g17770 | - | - | Detail |
| C1H7g25746 | 7:8,776,470-8,784,017 | + | C2H7g05976 | CX7g049098 | LOC_Os07g17970 | Os07g0280200 | - | Detail |
| C1H7g21082 | 7:8,817,795-8,822,601 | + | C2H7g11138 | CX7g046332 | LOC_Os07g17680 | Os07g0277500 | - | Detail |
| C1H7g24749 | 7:8,873,164-8,877,628 | - | C2H7g07539 | CX7g048480 | LOC_Os07g18050 | Os07g0281000 | - | Detail |
| C1H7g05996 | 7:8,933,870-8,934,690 | + | C2H7g09106 | CX7g046996 | LOC_Os07g18120 | Os07g0281700 | OsAO3 | Detail |
| C1H7g08684 | 7:8,939,771-8,942,661 | - | - | - | LOC_Os06g16040 | Os06g0271400 | - | Detail |
| C1H7g19161 | 7:8,956,138-8,963,700 | + | C2H7g09106 | CX7g048801 | LOC_Os07g18120 | Os07g0282401 | - | Detail |
| C1H7g27136 | 7:9,010,812-9,026,259 | + | C2H7g07447 | CX7g048801 | LOC_Os07g18158 | Os07g0282401 | - | Detail |
| C1H7g16646 | 7:9,053,834-9,061,383 | - | C2H7g15640 | CX7g050317 | LOC_Os07g18250 | Os07g0283200 | - | Detail |
| C1H7g23704 | 7:9,094,961-9,101,167 | - | C2H7g16928 | CX7g046473 | LOC_Os07g18540 | Os07g0285200 | - | Detail |
| C1H7g27758 | 7:9,105,634-9,107,397 | - | - | - | - | - | - | Detail |
| C1H7g20862 | 7:9,107,431-9,108,217 | - | C2H7g16928 | CX7g049930 | LOC_Os07g18560 | Os07g0285700 | - | Detail |
| C1H7g25574 | 7:9,162,096-9,164,001 | - | C2H7g03963 | CX7g049930 | LOC_Os07g18670 | Os07g0285200 | - | Detail |
| C1H7g00852 | 7:9,183,351-9,184,777 | + | C2H7g24527 | CX7g048475 | LOC_Os07g18710 | Os07g0287000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05108 | 3:4,707,270-4,710,116 | + | C1H3g14289 | CX3g026129 | LOC_Os03g10440 | Os03g0201500 | OsMORE1a | Detail |
| C2H3g04674 | 3:4,711,100-4,713,323 | - | C1H3g07517 | CX3g029780 | LOC_Os03g10450 | Os03g0201600 | - | Detail |
| C2H3g27684 | 3:4,714,151-4,716,867 | + | C1H3g08866 | CX3g025008 | LOC_Os03g10460 | Os03g0201700 | - | Detail |
| C2H3g15317 | 3:4,716,730-4,720,061 | - | C1H3g26823 | CX3g027908 | LOC_Os03g10469 | Os03g0201800 | - | Detail |
| C2H3g07444 | 3:4,720,624-4,725,054 | - | C1H3g22443 | CX3g027908 | LOC_Os03g10478 | Os03g0201901 | - | Detail |
| C2H3g09161 | 3:4,730,604-4,734,181 | - | C1H3g14443 | CX3g028036 | LOC_Os03g10500 | Os03g0202001 | - | Detail |
| C2H3g24025 | 3:4,736,414-4,740,022 | - | C1H3g22113 | CX3g026152 | LOC_Os03g10510 | Os03g0202200 | OsVDAC5 | Detail |
| C2H3g13194 | 3:4,741,051-4,745,017 | - | C1H3g27837 | CX3g030169 | LOC_Os03g10520 | Os03g0202300 | - | Detail |
| C2H3g17561 | 3:4,746,437-4,749,472 | - | C1H3g27666 | CX3g025689 | LOC_Os03g10590 | Os03g0203000 | - | Detail |
| C2H3g21513 | 3:4,752,859-4,759,444 | + | C1H3g27625 | CX3g029844 | LOC_Os03g10600 | Os03g0203100 | - | Detail |
| C2H3g08169 | 3:4,771,694-4,772,873 | + | C1H3g03653 | CX3g027943 | LOC_Os03g10620 | Os03g0203200 | D14, D88, D88/D14, qPPB3, HTD4 | Detail |
| C2H3g27974 | 3:4,783,031-4,789,961 | + | C1H3g22146 | CX3g027605 | LOC_Os03g10640 | Os03g0203700 | - | Detail |
| C2H3g08201 | 3:4,792,026-4,793,503 | - | C1H3g29891 | CX3g028482 | LOC_Os03g10650 | Os03g0203800 | - | Detail |
| C2H3g30001 | 3:4,812,950-4,817,305 | + | C1H3g06442 | CX3g026677 | LOC_Os03g10680 | Os03g0204100 | - | Detail |
| C2H3g23547 | 3:4,820,796-4,821,985 | + | C1H3g30369 | CX3g029117 | LOC_Os03g10730 | - | - | Detail |
| C2H3g15767 | 3:4,829,271-4,829,690 | - | C1H3g08546 | - | LOC_Os03g10710 | Os03g0204500 | - | Detail |
| C2H3g08384 | 3:4,832,991-4,834,679 | + | C1H3g00980 | CX3g029117 | LOC_Os03g10730 | - | - | Detail |
| C2H3g07827 | 3:4,838,784-4,841,678 | + | C1H3g16112 | CX3g030767 | LOC_Os03g10730 | Os03g0157000 | - | Detail |
| C2H3g15453 | 3:4,842,534-4,842,952 | - | C1H3g05329 | - | LOC_Os03g10740 | Os03g0204900 | - | Detail |
| C2H3g17885 | 3:4,844,672-4,850,468 | - | C1H3g13244 | CX3g028803 | LOC_Os03g10750 | Os03g0205000 | SPL35 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |