| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g07505 | 1:27,069,405-27,071,903 | - | C2H1g28242 | CX1g000027 | LOC_Os01g52680 | Os01g0726400 | MADS32, OsMADS32, CFO1, CFO1/OsMADS32, TRI1 | Detail |
| C1H1g17040 | 1:27,082,701-27,085,207 | + | C2H1g03941 | CX1g007145 | LOC_Os01g52690 | Os01g0726700 | - | Detail |
| C1H1g01057 | 1:27,098,025-27,102,587 | + | C2H1g23381 | CX1g003909 | LOC_Os01g52710 | Os01g0727100 | - | Detail |
| C1H1g19246 | 1:27,105,488-27,108,168 | + | C2H1g19647 | CX1g005872 | LOC_Os01g52720 | Os01g0727400 | - | Detail |
| C1H1g12496 | 1:27,113,567-27,114,853 | - | C2H1g27626 | CX1g003015 | LOC_Os01g52740 | Os01g0727600 | - | Detail |
| C1H1g13959 | 1:27,118,903-27,119,406 | - | C2H1g06165 | CX1g000031 | LOC_Os01g52750 | Os01g0727800 | - | Detail |
| C1H1g20367 | 1:27,119,512-27,121,598 | - | C2H1g06165 | CX1g000031 | LOC_Os01g52750 | Os01g0727800 | - | Detail |
| C1H1g10404 | 1:27,124,485-27,125,907 | - | C2H1g06165 | CX1g000031 | LOC_Os01g52750 | Os01g0727840 | - | Detail |
| C1H1g03195 | 1:27,128,417-27,129,954 | + | C2H1g10283 | CX1g000775 | LOC_Os01g52760 | Os01g0727900 | - | Detail |
| C1H1g13378 | 1:27,138,484-27,140,735 | + | C2H1g05247 | CX1g000699 | LOC_Os01g52770 | Os01g0728100 | - | Detail |
| C1H1g24144 | 1:27,140,932-27,142,061 | - | C2H1g01766 | CX1g005271 | LOC_Os01g52780 | Os01g0728150 | - | Detail |
| C1H1g11513 | 1:27,143,019-27,147,174 | - | C2H1g04992 | CX1g006621 | LOC_Os01g52780 | Os01g0728200 | - | Detail |
| C1H1g29225 | 1:27,149,280-27,153,310 | - | C2H1g21067 | CX1g001354 | LOC_Os01g52790 | Os01g0728300 | - | Detail |
| C1H1g27738 | 1:27,157,771-27,158,620 | - | C2H1g25878 | CX1g001403 | LOC_Os01g52830 | Os01g0728700 | - | Detail |
| C1H1g16764 | 1:27,162,572-27,165,978 | + | C2H1g00719 | CX1g004662 | LOC_Os01g52864 | Os01g0729100 | - | Detail |
| C1H1g29905 | 1:27,173,356-27,173,661 | - | C2H1g01846 | - | LOC_Os01g52890 | Os01g0729500 | - | Detail |
| C1H1g29198 | 1:27,173,986-27,175,929 | - | C2H1g01846 | CX1g001938 | LOC_Os01g52900 | Os01g0729600 | - | Detail |
| C1H1g12193 | 1:27,195,510-27,199,937 | + | C2H1g03641 | CX1g002816 | LOC_Os01g52920 | Os01g0729900 | - | Detail |
| C1H1g12702 | 1:27,201,699-27,203,286 | - | C2H1g19584 | CX1g001631 | LOC_Os01g52970 | Os01g0730100 | - | Detail |
| C1H1g06718 | 1:27,205,939-27,207,714 | - | C2H1g18512 | CX1g000876 | LOC_Os01g52980 | Os01g0730200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g22282 | 3:6,493,909-6,497,104 | - | C1H3g02595 | CX3g025312 | LOC_Os03g13520 | Os03g0238300 | - | Detail |
| C2H3g15172 | 3:6,513,499-6,516,356 | + | C1H3g23768 | CX3g029412 | LOC_Os03g13540 | Os03g0238600 | - | Detail |
| C2H3g18176 | 3:6,517,082-6,520,275 | - | C1H3g02167 | CX3g030281 | LOC_Os03g13550 | Os03g0238700 | - | Detail |
| C2H3g03887 | 3:6,520,826-6,526,431 | - | C1H3g21099 | CX3g028158 | LOC_Os03g13560 | Os03g0238800 | - | Detail |
| C2H3g08796 | 3:6,531,826-6,534,710 | - | C1H3g04969 | CX3g027800 | LOC_Os03g13570 | Os03g0239000 | - | Detail |
| C2H3g02771 | 3:6,538,166-6,542,437 | + | C1H3g08050 | CX3g025956 | LOC_Os03g13590 | Os03g0239200 | - | Detail |
| C2H3g14398 | 3:6,544,081-6,544,812 | - | C1H3g17605 | CX3g028621 | LOC_Os03g13600 | Os03g0239300 | - | Detail |
| C2H3g26731 | 3:6,549,139-6,558,153 | - | C1H3g02449 | CX3g025599 | LOC_Os03g13614 | Os03g0239400 | - | Detail |
| C2H3g30584 | 3:6,562,730-6,563,314 | + | - | - | - | - | - | Detail |
| C2H3g26790 | 3:6,563,529-6,566,162 | + | C1H3g30005 | CX3g025587 | LOC_Os03g13720 | Os03g0240400 | - | Detail |
| C2H3g30457 | 3:6,566,771-6,570,453 | - | C1H3g14777 | CX3g026273 | LOC_Os03g13730 | Os03g0240500 | - | Detail |
| C2H3g18591 | 3:6,572,229-6,573,566 | - | C1H3g24877 | CX3g029557 | LOC_Os03g13740 | Os03g0240600 | OsUPS | Detail |
| C2H3g19605 | 3:6,578,207-6,581,299 | - | C1H3g17490 | CX3g026950 | LOC_Os03g13750 | Os03g0240700 | - | Detail |
| C2H3g24897 | 3:6,581,494-6,584,224 | + | C1H3g10474 | CX3g031005 | LOC_Os03g13760 | Os03g0240800 | - | Detail |
| C2H3g16324 | 3:6,585,234-6,589,833 | - | C1H3g03667 | CX3g025683 | LOC_Os03g13770 | Os03g0240900 | - | Detail |
| C2H3g26862 | 3:6,591,356-6,597,751 | + | C1H3g00374 | CX3g026829 | LOC_Os03g13790 | Os03g0241100 | - | Detail |
| C2H3g04183 | 3:6,598,651-6,600,124 | + | C1H3g07634 | CX3g030938 | LOC_Os03g13800 | Os03g0241200 | - | Detail |
| C2H3g01854 | 3:6,602,208-6,605,133 | + | C1H3g27482 | CX3g029324 | LOC_Os03g13810 | Os03g0241300 | - | Detail |
| C2H3g18795 | 3:6,605,164-6,609,389 | - | C1H3g15084 | CX3g027367 | LOC_Os03g13820 | Os03g0241600 | - | Detail |
| C2H3g10673 | 3:6,617,896-6,621,324 | - | C1H3g00982 | CX3g028625 | LOC_Os03g13830 | Os03g0241800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |