| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g07505 | 1:27,069,405-27,071,903 | - | C2H1g28242 | CX1g000027 | LOC_Os01g52680 | Os01g0726400 | MADS32, OsMADS32, CFO1, CFO1/OsMADS32, TRI1 | Detail |
| C1H1g17040 | 1:27,082,701-27,085,207 | + | C2H1g03941 | CX1g007145 | LOC_Os01g52690 | Os01g0726700 | - | Detail |
| C1H1g01057 | 1:27,098,025-27,102,587 | + | C2H1g23381 | CX1g003909 | LOC_Os01g52710 | Os01g0727100 | - | Detail |
| C1H1g19246 | 1:27,105,488-27,108,168 | + | C2H1g19647 | CX1g005872 | LOC_Os01g52720 | Os01g0727400 | - | Detail |
| C1H1g12496 | 1:27,113,567-27,114,853 | - | C2H1g27626 | CX1g003015 | LOC_Os01g52740 | Os01g0727600 | - | Detail |
| C1H1g13959 | 1:27,118,903-27,119,406 | - | C2H1g06165 | CX1g000031 | LOC_Os01g52750 | Os01g0727800 | - | Detail |
| C1H1g20367 | 1:27,119,512-27,121,598 | - | C2H1g06165 | CX1g000031 | LOC_Os01g52750 | Os01g0727800 | - | Detail |
| C1H1g10404 | 1:27,124,485-27,125,907 | - | C2H1g06165 | CX1g000031 | LOC_Os01g52750 | Os01g0727840 | - | Detail |
| C1H1g03195 | 1:27,128,417-27,129,954 | + | C2H1g10283 | CX1g000775 | LOC_Os01g52760 | Os01g0727900 | - | Detail |
| C1H1g13378 | 1:27,138,484-27,140,735 | + | C2H1g05247 | CX1g000699 | LOC_Os01g52770 | Os01g0728100 | - | Detail |
| C1H1g24144 | 1:27,140,932-27,142,061 | - | C2H1g01766 | CX1g005271 | LOC_Os01g52780 | Os01g0728150 | - | Detail |
| C1H1g11513 | 1:27,143,019-27,147,174 | - | C2H1g04992 | CX1g006621 | LOC_Os01g52780 | Os01g0728200 | - | Detail |
| C1H1g29225 | 1:27,149,280-27,153,310 | - | C2H1g21067 | CX1g001354 | LOC_Os01g52790 | Os01g0728300 | - | Detail |
| C1H1g27738 | 1:27,157,771-27,158,620 | - | C2H1g25878 | CX1g001403 | LOC_Os01g52830 | Os01g0728700 | - | Detail |
| C1H1g16764 | 1:27,162,572-27,165,978 | + | C2H1g00719 | CX1g004662 | LOC_Os01g52864 | Os01g0729100 | - | Detail |
| C1H1g29905 | 1:27,173,356-27,173,661 | - | C2H1g01846 | - | LOC_Os01g52890 | Os01g0729500 | - | Detail |
| C1H1g29198 | 1:27,173,986-27,175,929 | - | C2H1g01846 | CX1g001938 | LOC_Os01g52900 | Os01g0729600 | - | Detail |
| C1H1g12193 | 1:27,195,510-27,199,937 | + | C2H1g03641 | CX1g002816 | LOC_Os01g52920 | Os01g0729900 | - | Detail |
| C1H1g12702 | 1:27,201,699-27,203,286 | - | C2H1g19584 | CX1g001631 | LOC_Os01g52970 | Os01g0730100 | - | Detail |
| C1H1g06718 | 1:27,205,939-27,207,714 | - | C2H1g18512 | CX1g000876 | LOC_Os01g52980 | Os01g0730200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g03165 | 12:18,372,526-18,376,103 | - | C1H12g05744 | CX12g015818 | LOC_Os12g36110 | Os12g0547600 | - | Detail |
| C2H12g21058 | 12:18,383,920-18,389,545 | - | C1H12g20257 | CX12g018751 | LOC_Os12g36170 | Os12g0548100 | - | Detail |
| C2H12g29908 | 12:18,392,672-18,399,954 | - | C1H12g12585 | CX12g017536 | LOC_Os12g36180 | Os12g0548200 | XB21 | Detail |
| C2H12g20821 | 12:18,403,555-18,406,793 | + | C1H12g05858 | CX12g017699 | LOC_Os12g36194 | Os12g0548300 | - | Detail |
| C2H12g30411 | 12:18,408,165-18,408,398 | - | C1H12g27486 | CX12g015912 | LOC_Os12g36210 | Os12g0548401 | - | Detail |
| C2H12g13408 | 12:18,412,780-18,413,016 | - | C1H12g16367 | CX12g015912 | LOC_Os12g36210 | Os12g0548401 | - | Detail |
| C2H12g06169 | 12:18,416,805-18,417,044 | - | C1H12g16367 | CX12g015912 | LOC_Os12g36210 | Os12g0548401 | - | Detail |
| C2H12g03907 | 12:18,424,212-18,424,418 | - | C1H12g24837 | CX12g015912 | LOC_Os12g36240 | Os12g0548700 | - | Detail |
| C2H12g01973 | 12:18,434,456-18,439,784 | + | C1H12g05083 | CX12g015236 | LOC_Os12g36270 | Os12g0548800 | - | Detail |
| C2H12g12755 | 12:18,500,147-18,501,986 | + | - | - | - | - | - | Detail |
| C2H12g25397 | 12:18,502,001-18,502,264 | + | C1H12g28951 | CX12g018811 | LOC_Os11g04300 | Os12g0135100 | - | Detail |
| C2H12g26927 | 12:18,515,163-18,515,576 | - | - | CX12g018824 | - | Os12g0277200 | - | Detail |
| C2H12g13671 | 12:18,527,347-18,529,792 | - | C1H12g04268 | CX12g016101 | LOC_Os12g36490 | Os12g0551200 | - | Detail |
| C2H12g13321 | 12:18,537,478-18,538,111 | - | C1H12g27189 | CX12g015236 | LOC_Os12g36490 | Os12g0551200 | - | Detail |
| C2H12g04025 | 12:18,570,562-18,572,160 | + | C1H12g03618 | CX12g017757 | LOC_Os12g36530 | Os12g0552200 | - | Detail |
| C2H12g17216 | 12:18,582,619-18,583,718 | + | C1H12g03214 | CX12g015841 | LOC_Os12g36580 | Os12g0551900 | - | Detail |
| C2H12g02214 | 12:18,583,734-18,585,181 | + | C1H12g03214 | CX12g015847 | LOC_Os12g36580 | Os12g0551900 | - | Detail |
| C2H12g12145 | 12:18,586,900-18,593,459 | - | C1H12g27189 | CX12g017911 | LOC_Os12g36340 | Os12g0549800 | - | Detail |
| C2H12g26461 | 12:18,604,694-18,609,862 | - | C1H12g13279 | CX12g015365 | LOC_Os12g36620 | Os12g0552300 | PPS1 | Detail |
| C2H12g03198 | 12:18,610,827-18,611,742 | - | C1H12g23815 | CX12g016909 | LOC_Os12g36630 | Os12g0552400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |