| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g13957 | 7:6,180,616-6,182,683 | - | C2H7g22553 | CX7g048372 | LOC_Os07g12730 | Os07g0230700 | - | Detail |
| C1H7g06206 | 7:6,197,931-6,200,128 | - | C2H7g12068 | CX7g048469 | LOC_Os07g12730 | Os07g0230700 | - | Detail |
| C1H7g01657 | 7:6,204,947-6,206,295 | - | C2H7g07498 | CX7g048178 | LOC_Os07g12730 | Os07g0230700 | - | Detail |
| C1H7g03693 | 7:6,215,228-6,217,540 | + | C2H7g26762 | CX7g049891 | LOC_Os07g12770 | Os07g0231400 | - | Detail |
| C1H7g18530 | 7:6,219,956-6,221,086 | + | C2H7g26762 | CX7g049891 | LOC_Os07g12770 | Os07g0231400 | - | Detail |
| C1H7g08963 | 7:6,231,062-6,232,623 | + | C2H7g02381 | CX7g049201 | LOC_Os07g12800 | Os07g0231800 | - | Detail |
| C1H7g02116 | 7:6,237,138-6,241,836 | - | C2H7g12874 | CX7g048910 | LOC_Os07g12810 | Os07g0231900 | - | Detail |
| C1H7g06867 | 7:6,250,860-6,252,153 | - | C2H7g30315 | CX7g049933 | LOC_Os07g12820 | Os07g0232100 | OsREM20 | Detail |
| C1H7g25642 | 7:6,260,222-6,266,668 | + | C2H7g05202 | CX7g050072 | LOC_Os07g12830 | Os07g0232200 | - | Detail |
| C1H7g22619 | 7:6,279,848-6,280,721 | - | C2H7g00996 | - | - | - | - | Detail |
| C1H7g02868 | 7:6,299,169-6,302,273 | + | C2H7g17093 | CX7g046316 | LOC_Os07g12890 | Os07g0232800 | - | Detail |
| C1H7g20763 | 7:6,306,753-6,310,738 | - | C2H7g01423 | CX7g049630 | LOC_Os07g12900 | Os07g0232900 | HMA3, OsHMA3, OsHMA3a, OsHMA3n, osHMA3 | Detail |
| C1H7g22364 | 7:6,313,797-6,314,384 | + | C2H7g02241 | CX7g047155 | - | Os07g0233200 | - | Detail |
| C1H7g03828 | 7:6,316,448-6,319,519 | - | C2H7g17520 | CX7g047399 | LOC_Os07g12910 | Os07g0233300 | - | Detail |
| C1H7g19486 | 7:6,362,044-6,365,561 | + | C2H7g22291 | CX7g047888 | LOC_Os07g13170 | Os07g0235800 | SNB, AP2/EREBP73, OsSNB | Detail |
| C1H7g18736 | 7:6,452,717-6,455,953 | + | C2H7g02587 | CX7g046569 | LOC_Os07g13270 | Os07g0236800 | - | Detail |
| C1H7g23858 | 7:6,457,811-6,459,651 | - | - | - | - | - | - | Detail |
| C1H7g02129 | 7:6,463,085-6,465,468 | - | C2H7g03501 | CX7g047071 | LOC_Os07g13280 | Os07g0237100 | - | Detail |
| C1H7g24894 | 7:6,465,500-6,466,174 | - | - | - | - | - | - | Detail |
| C1H7g20300 | 7:6,467,893-6,468,132 | - | C2H7g10881 | CX7g046591 | LOC_Os07g13310 | Os07g0237200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g21741 | 9:2,986,268-2,986,771 | - | C1H9g07768 | - | - | Os09g0244200 | - | Detail |
| C2H9g30494 | 9:3,009,300-3,010,197 | - | C1H9g17173 | CX9g057551 | - | - | - | Detail |
| C2H9g28125 | 9:3,010,300-3,011,416 | - | C1H9g06387 | - | - | - | - | Detail |
| C2H9g24451 | 9:3,016,670-3,019,409 | - | C1H9g22327 | - | - | - | - | Detail |
| C2H9g04741 | 9:3,027,771-3,033,859 | + | C1H9g08332 | CX9g056516 | LOC_Os09g06970 | Os09g0244900 | - | Detail |
| C2H9g11433 | 9:3,035,509-3,037,392 | - | - | CX9g055302 | - | - | - | Detail |
| C2H9g23086 | 9:3,084,336-3,087,543 | - | C1H9g22497 | CX9g055027 | LOC_Os09g07020 | Os09g0245500 | - | Detail |
| C2H9g19449 | 9:3,116,449-3,128,333 | - | C1H9g05469 | CX9g056365 | LOC_Os09g07120 | Os09g0246200 | OsRpoTm | Detail |
| C2H9g10914 | 9:3,137,085-3,140,453 | + | - | - | - | - | - | Detail |
| C2H9g23389 | 9:3,154,795-3,155,448 | - | - | - | - | - | - | Detail |
| C2H9g28188 | 9:3,158,904-3,159,128 | + | C1H9g16757 | - | - | - | - | Detail |
| C2H9g28356 | 9:3,177,188-3,180,168 | - | C1H9g26283 | CX9g056448 | LOC_Os09g07160 | Os09g0246700 | - | Detail |
| C2H9g26775 | 9:3,191,976-3,192,494 | - | C1H9g05149 | CX9g057493 | LOC_Os09g07290 | Os09g0247600 | - | Detail |
| C2H9g16885 | 9:3,194,879-3,195,330 | - | C1H9g05149 | CX9g057493 | LOC_Os09g07290 | Os09g0247600 | - | Detail |
| C2H9g13808 | 9:3,196,281-3,217,763 | - | C1H9g03723 | CX9g056792 | LOC_Os09g07294 | Os09g0247700 | BIG, OsBIG | Detail |
| C2H9g09397 | 9:3,234,585-3,245,133 | + | C1H9g01018 | CX9g057562 | LOC_Os09g07320 | Os09g0248000 | - | Detail |
| C2H9g08473 | 9:3,249,292-3,252,653 | - | C1H9g06797 | CX9g055094 | - | - | - | Detail |
| C2H9g28802 | 9:3,264,735-3,268,278 | + | C1H9g24946 | CX9g055193 | LOC_Os09g07350 | Os09g0248100 | - | Detail |
| C2H9g10868 | 9:3,270,362-3,275,333 | - | C1H9g15667 | CX9g057457 | LOC_Os09g07360 | Os09g0248200 | - | Detail |
| C2H9g03673 | 9:3,278,744-3,284,140 | - | C1H9g15803 | CX9g057457 | LOC_Os09g07380 | Os09g0248300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |