| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g08385 | 7:5,191,463-5,197,237 | + | C2H7g08953 | CX7g046359 | LOC_Os07g11020 | Os07g0211500 | Rc | Detail |
| C1H7g07016 | 7:5,223,459-5,230,532 | - | C2H7g10582 | CX7g046560 | LOC_Os07g11060 | Os07g0211800 | - | Detail |
| C1H7g05061 | 7:5,232,942-5,236,859 | - | C2H7g13970 | CX7g046858 | LOC_Os07g11070 | Os07g0211900 | - | Detail |
| C1H7g13477 | 7:5,244,539-5,246,871 | + | C2H7g16955 | CX7g047558 | LOC_Os07g11110 | Os07g0212200 | - | Detail |
| C1H7g14014 | 7:5,247,914-5,251,281 | - | C2H7g27467 | CX7g049045 | LOC_Os07g11120 | Os07g0212300 | - | Detail |
| C1H7g26399 | 7:5,284,847-5,290,711 | - | C2H7g24379 | CX7g048312 | LOC_Os07g11280 | Os07g0213300 | - | Detail |
| C1H7g04766 | 7:5,294,333-5,295,808 | + | C2H7g14477 | CX7g048676 | LOC_Os07g11290 | Os07g0213400 | - | Detail |
| C1H7g06639 | 7:5,327,476-5,329,616 | + | - | - | - | - | - | Detail |
| C1H7g21823 | 7:5,453,420-5,455,345 | - | C2H7g06488 | CX7g049085 | LOC_Os07g11970 | Os07g0218700 | OsCYP71Z21 | Detail |
| C1H7g01895 | 7:5,464,433-5,470,743 | + | - | - | LOC_Os07g11790 | Os07g0218200 | OsTPS28 | Detail |
| C1H7g26702 | 7:5,485,929-5,489,057 | + | C2H7g06488 | CX7g049085 | LOC_Os07g11970 | Os07g0218700 | OsCYP71Z21 | Detail |
| C1H7g08318 | 7:5,519,017-5,520,019 | + | - | - | - | - | - | Detail |
| C1H7g09518 | 7:5,537,172-5,540,789 | - | C2H7g06488 | CX7g049085 | LOC_Os07g11970 | Os07g0218700 | OsCYP71Z21 | Detail |
| C1H7g21132 | 7:5,635,011-5,635,478 | - | C2H7g13994 | CX7g050044 | LOC_Os07g11310 | Os07g0222000 | - | Detail |
| C1H7g28498 | 7:5,664,786-5,665,247 | - | C2H7g16490 | CX7g047648 | LOC_Os07g12100 | Os07g0222200 | - | Detail |
| C1H7g12195 | 7:5,703,655-5,706,971 | - | C2H7g16490 | CX7g047648 | LOC_Os07g12100 | Os07g0222200 | - | Detail |
| C1H7g14429 | 7:5,713,620-5,717,023 | - | C2H7g02270 | CX7g047830 | LOC_Os07g12110 | Os07g0222300 | - | Detail |
| C1H7g06408 | 7:5,725,790-5,729,021 | - | C2H7g05609 | CX7g049337 | LOC_Os07g12130 | Os07g0222600 | Os2R_MYB67 | Detail |
| C1H7g25124 | 7:5,738,865-5,744,324 | + | C2H7g03585 | CX7g046634 | LOC_Os07g12140 | Os07g0222700 | - | Detail |
| C1H7g20469 | 7:5,745,739-5,746,204 | + | C2H7g15355 | CX7g046772 | LOC_Os07g12150 | Os07g0222800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g19519 | 5:3,806,535-3,807,523 | + | C1H5g05273 | CX5g039762 | LOC_Os05g08530 | Os05g0178000 | - | Detail |
| C2H5g08820 | 5:3,810,342-3,811,410 | - | C1H5g26746 | CX5g040319 | LOC_Os05g08540 | Os05g0178100 | GA3OX1, OsGA3ox1, GA3ox1, OsGA3OX1 | Detail |
| C2H5g24682 | 5:3,811,471-3,812,055 | - | C1H5g15273 | CX5g040319 | LOC_Os05g08540 | Os05g0178100 | GA3OX1, OsGA3ox1, GA3ox1, OsGA3OX1 | Detail |
| C2H5g23593 | 5:3,812,886-3,813,561 | - | C1H5g24081 | CX5g038579 | LOC_Os05g08550 | - | - | Detail |
| C2H5g22086 | 5:3,814,422-3,816,906 | - | C1H5g18416 | CX5g037926 | LOC_Os05g08554 | Os05g0178300 | - | Detail |
| C2H5g19576 | 5:3,818,245-3,821,564 | - | C1H5g28500 | CX5g037936 | LOC_Os05g08560 | Os05g0178400 | - | Detail |
| C2H5g23931 | 5:3,828,656-3,831,151 | - | C1H5g30909 | CX5g039091 | LOC_Os05g08570 | Os05g0178600 | - | Detail |
| C2H5g20930 | 5:3,831,186-3,831,443 | - | C1H5g11220 | CX5g038646 | - | Os05g0178600 | - | Detail |
| C2H5g20358 | 5:3,851,213-3,855,100 | + | C1H5g28275 | CX5g038400 | LOC_Os05g08600 | Os05g0178900 | - | Detail |
| C2H5g18108 | 5:3,857,538-3,861,896 | + | C1H5g03795 | CX5g039771 | LOC_Os05g08610 | Os05g0179000 | - | Detail |
| C2H5g28488 | 5:3,873,219-3,873,671 | + | C1H5g15516 | - | LOC_Os08g23900 | - | - | Detail |
| C2H5g17102 | 5:3,895,817-3,897,238 | - | C1H5g19959 | CX5g037983 | LOC_Os05g08640 | Os05g0179300 | - | Detail |
| C2H5g23753 | 5:3,923,426-3,926,532 | + | C1H5g21520 | CX5g039721 | LOC_Os05g08730 | Os05g0179800 | - | Detail |
| C2H5g25802 | 5:3,966,183-3,969,681 | - | C1H5g27830 | CX5g038350 | LOC_Os05g08790 | Os05g0180400 | - | Detail |
| C2H5g06685 | 5:3,970,612-3,973,529 | - | C1H5g02747 | CX5g037875 | LOC_Os05g08800 | Os05g0180500 | - | Detail |
| C2H5g05984 | 5:3,988,380-3,998,378 | - | C1H5g20076 | CX5g036876 | LOC_Os05g08810 | Os05g0180600 | - | Detail |
| C2H5g03050 | 5:3,999,805-4,000,905 | + | C1H5g03323 | CX5g037205 | LOC_Os05g08820 | Os05g0180700 | - | Detail |
| C2H5g11956 | 5:4,009,266-4,015,221 | + | C1H5g21276 | CX5g037851 | LOC_Os05g08840 | Os05g0181000 | - | Detail |
| C2H5g06572 | 5:4,019,186-4,020,189 | - | C1H5g29149 | CX5g037202 | LOC_Os05g08854 | Os05g0181250 | - | Detail |
| C2H5g00592 | 5:4,027,481-4,027,732 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |