| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g18406 | 7:4,702,189-4,707,153 | + | C2H7g20383 | CX7g046693 | LOC_Os07g10300 | Os07g0202900 | - | Detail |
| C1H7g03082 | 7:4,727,214-4,746,376 | + | C2H7g11574 | CX7g049668 | LOC_Os07g10350 | Os07g0203300 | - | Detail |
| C1H7g05916 | 7:4,751,794-4,752,441 | + | C2H7g19153 | CX7g048238 | LOC_Os07g10370 | Os07g0203500 | - | Detail |
| C1H7g24934 | 7:4,755,304-4,768,190 | - | C2H7g30071 | CX7g049433 | LOC_Os07g10390 | Os07g0203700 | SPL5, SF3b3 | Detail |
| C1H7g21123 | 7:4,789,727-4,791,250 | + | C2H7g02503 | CX7g046852 | LOC_Os07g10420 | Os07g0204100 | - | Detail |
| C1H7g05822 | 7:4,801,634-4,802,013 | + | C2H7g06849 | CX7g048786 | LOC_Os03g59210 | Os07g0204400 | - | Detail |
| C1H7g29955 | 7:4,803,266-4,808,917 | - | C2H7g01151 | CX7g047483 | LOC_Os07g10460 | Os07g0204500 | - | Detail |
| C1H7g28931 | 7:4,817,506-4,823,096 | + | C2H7g04705 | CX7g048908 | LOC_Os07g10490 | Os07g0204900 | - | Detail |
| C1H7g18363 | 7:4,827,195-4,829,051 | + | C2H7g11636 | CX3g026400 | LOC_Os07g10500 | Os07g0205000 | - | Detail |
| C1H7g20167 | 7:4,833,138-4,841,147 | + | C2H7g00373 | CX7g046689 | LOC_Os07g10520 | Os07g0205200 | - | Detail |
| C1H7g21591 | 7:4,855,981-4,859,269 | + | C2H7g10778 | CX7g047456 | LOC_Os07g10530 | Os07g0205500 | - | Detail |
| C1H7g29675 | 7:4,872,247-4,879,673 | - | C2H7g04993 | CX7g047247 | LOC_Os07g10540 | Os07g0205700 | - | Detail |
| C1H7g07546 | 7:4,883,113-4,890,863 | - | C2H7g19403 | CX7g046496 | LOC_Os07g10550 | Os07g0205900 | - | Detail |
| C1H7g15560 | 7:4,915,250-4,915,720 | + | C2H7g14312 | CX7g047176 | LOC_Os07g10570 | Os07g0206400 | - | Detail |
| C1H7g23358 | 7:4,920,690-4,921,160 | + | C2H7g01106 | CX7g046567 | LOC_Os07g10580 | Os07g0206500 | - | Detail |
| C1H7g24040 | 7:4,925,201-4,927,446 | - | C2H7g17912 | CX7g047137 | LOC_Os07g10590 | Os07g0206600 | OsSTP22 | Detail |
| C1H7g17307 | 7:4,928,486-4,934,299 | - | C2H7g23809 | CX7g046543 | LOC_Os07g10600 | Os07g0206700 | - | Detail |
| C1H7g25098 | 7:4,942,973-4,947,644 | - | C2H7g17735 | CX7g048520 | LOC_Os07g10610 | Os07g0206800 | - | Detail |
| C1H7g18540 | 7:4,953,174-4,959,392 | - | C2H7g27744 | CX7g048336 | LOC_Os07g10630 | Os07g0207100 | - | Detail |
| C1H7g17000 | 7:4,968,654-4,970,298 | + | C2H7g07379 | CX7g050419 | LOC_Os07g10660 | Os07g0207400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g20602 | 1:33,825,406-33,829,243 | - | C1H1g06784 | CX1g002810 | LOC_Os01g65940 | Os01g0881966 | - | Detail |
| C2H1g14820 | 1:33,829,342-33,829,683 | - | - | - | - | - | - | Detail |
| C2H1g18577 | 1:33,831,291-33,831,649 | + | C1H1g26227 | CX1g002714 | LOC_Os01g65950 | Os01g0882100 | - | Detail |
| C2H1g05908 | 1:33,835,359-33,841,512 | + | C1H1g03465 | CX1g004350 | LOC_Os01g65986 | Os01g0882300 | - | Detail |
| C2H1g09811 | 1:33,841,734-33,842,687 | - | C1H1g00623 | CX1g004839 | LOC_Os01g66000 | Os01g0882500 | - | Detail |
| C2H1g26075 | 1:33,844,719-33,847,776 | - | C1H1g12565 | CX1g001863 | LOC_Os01g66010 | Os01g0882800 | OsAAP8 | Detail |
| C2H1g11503 | 1:33,854,099-33,856,181 | - | C1H1g27902 | CX1g000214 | LOC_Os01g66030 | Os01g0883100 | OsMADS2 | Detail |
| C2H1g08965 | 1:33,858,404-33,865,168 | + | C1H1g29165 | CX1g004776 | LOC_Os01g66050 | Os01g0883200 | - | Detail |
| C2H1g18953 | 1:33,898,433-33,901,519 | + | C1H1g04579 | CX1g004921 | LOC_Os01g66100 | Os01g0883800 | 20ox2, C20OX2, GA20, GA20ox-2, Os20ox2, OsGA20ox-2, OsGA20ox2, SD1, SD1-in, SD1-ja, Sd-1, d47, d49, sd-1, sd1, "sd1 (d47, sd1-d, sd1-1)", sd1-1, sd1-2, sd1-3, sd1-4 | Detail |
| C2H1g12762 | 1:33,902,414-33,907,948 | - | C1H1g11499 | CX1g004480 | LOC_Os01g66110 | Os01g0883900 | - | Detail |
| C2H1g26289 | 1:33,916,327-33,918,090 | - | C1H1g00819 | CX1g006945 | LOC_Os01g66120 | Os01g0884300 | OsNAC6 | Detail |
| C2H1g15992 | 1:33,927,325-33,931,236 | + | C1H1g22008 | CX1g000207 | LOC_Os01g66130 | Os01g0884400 | OsPUB16, OsPIE3 | Detail |
| C2H1g16552 | 1:33,931,364-33,942,765 | - | C1H1g14405 | CX1g001201 | LOC_Os01g66140 | Os01g0884500 | - | Detail |
| C2H1g27234 | 1:33,944,159-33,947,234 | - | C1H1g17014 | CX1g001119 | - | - | - | Detail |
| C2H1g20664 | 1:33,951,528-33,953,587 | - | C1H1g08290 | CX1g001844 | LOC_Os01g66150 | Os01g0884700 | - | Detail |
| C2H1g19237 | 1:33,955,455-33,957,011 | + | C1H1g07105 | CX1g005283 | LOC_Os01g66160 | Os01g0884800 | - | Detail |
| C2H1g27259 | 1:33,957,249-33,960,272 | - | C1H1g15937 | CX1g006373 | LOC_Os01g66170 | Os01g0884900 | - | Detail |
| C2H1g17695 | 1:33,961,162-33,963,507 | + | C1H1g27873 | CX1g005687 | LOC_Os01g66180 | Os01g0885000 | - | Detail |
| C2H1g03917 | 1:33,970,832-33,976,494 | - | C1H1g19782 | CX1g002733 | LOC_Os01g66200 | Os01g0885300 | - | Detail |
| C2H1g15479 | 1:33,981,535-33,987,010 | - | C1H1g04510 | CX1g006568 | LOC_Os01g66230 | Os01g0885500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |