| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g03783 | 7:3,780,217-3,783,465 | - | C2H7g16319 | CX7g046571 | LOC_Os07g08430 | Os07g0182100 | - | Detail |
| C1H7g22816 | 7:3,789,335-3,792,475 | + | C2H7g13219 | CX7g046025 | LOC_Os07g08440 | Os07g0182200 | - | Detail |
| C1H7g08147 | 7:3,807,676-3,808,974 | - | C2H7g21054 | CX7g048026 | LOC_Os07g08460 | Os07g0182400 | - | Detail |
| C1H7g08163 | 7:3,832,487-3,833,275 | - | C2H7g27628 | CX7g049402 | - | Os07g0182601 | - | Detail |
| C1H7g17559 | 7:3,840,379-3,847,180 | + | C2H7g01878 | CX7g047392 | LOC_Os07g08500 | Os07g0182900 | MET1B, OsMET1b | Detail |
| C1H7g01208 | 7:3,883,980-3,887,626 | - | C2H7g05997 | CX7g049817 | LOC_Os07g08520 | Os07g0183100 | - | Detail |
| C1H7g01935 | 7:3,888,270-3,889,742 | + | C2H7g13555 | CX7g047842 | LOC_Os07g08530 | Os07g0183200 | - | Detail |
| C1H7g03119 | 7:3,909,043-3,910,595 | - | C2H7g11185 | CX7g049244 | LOC_Os07g08660 | Os03g0798600 | - | Detail |
| C1H7g16015 | 7:3,918,959-3,920,511 | + | C2H7g06349 | CX7g047415 | LOC_Os07g08710 | Os07g0184800 | OsATH1 | Detail |
| C1H7g09330 | 7:3,921,171-3,929,205 | + | C2H7g15936 | CX7g046514 | LOC_Os07g08729 | Os07g0184900 | - | Detail |
| C1H7g00026 | 7:3,931,908-3,934,880 | - | C2H7g05786 | CX7g048929 | LOC_Os07g08750 | Os07g0185000 | - | Detail |
| C1H7g02270 | 7:3,936,833-3,941,172 | - | C2H7g20869 | CX7g050270 | LOC_Os07g08760 | Os07g0185200 | - | Detail |
| C1H7g21233 | 7:3,960,432-3,966,423 | + | C2H7g09570 | CX7g050362 | LOC_Os07g08790 | Os07g0185432 | - | Detail |
| C1H7g04399 | 7:3,974,316-3,981,839 | + | C2H7g02745 | CX7g049699 | LOC_Os07g08810 | Os07g0185700 | - | Detail |
| C1H7g17793 | 7:3,985,947-3,989,076 | + | C2H7g29336 | CX7g048108 | LOC_Os07g08820 | Os07g0185800 | - | Detail |
| C1H7g13541 | 7:3,997,534-3,997,770 | - | C2H7g13139 | CX3g028966 | - | Os07g0185900 | - | Detail |
| C1H7g15110 | 7:4,004,800-4,006,586 | - | C2H7g30045 | CX7g047579 | LOC_Os07g08840 | Os07g0186000 | TRXH, trxh, Trx-H, OsTRXh1, OsTrxh1, Os1, OsTrx23, RPP13-1 | Detail |
| C1H7g31770 | 7:4,031,391-4,036,599 | + | C2H7g00916 | CX7g047241 | LOC_Os07g08880 | Os07g0186400 | OsSHL1 | Detail |
| C1H7g06257 | 7:4,038,943-4,041,663 | + | C2H7g24863 | CX7g047241 | LOC_Os07g08890 | Os07g0186500 | - | Detail |
| C1H7g14544 | 7:4,044,365-4,050,529 | + | C2H7g24828 | CX7g047294 | LOC_Os07g08950 | Os07g0187200 | OsD-LDH2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g00812 | 5:15,438,829-15,442,874 | + | C1H5g22192 | CX5g040874 | LOC_Os05g31680 | Os05g0381500 | - | Detail |
| C2H5g24506 | 5:15,472,095-15,472,628 | - | - | - | - | - | - | Detail |
| C2H5g04833 | 5:15,485,983-15,489,606 | + | C1H5g25084 | CX5g040022 | LOC_Os05g31720 | Os05g0382000 | - | Detail |
| C2H5g08328 | 5:15,493,949-15,497,950 | - | C1H5g14307 | CX5g037534 | LOC_Os05g31730 | Os05g0382200 | - | Detail |
| C2H5g19685 | 5:15,512,813-15,514,475 | - | C1H5g01406 | CX5g040387 | LOC_Os05g31750 | Os05g0382600 | - | Detail |
| C2H5g11708 | 5:15,518,256-15,520,181 | + | C1H5g16657 | CX5g039703 | LOC_Os05g31760 | Os05g0382900 | - | Detail |
| C2H5g06666 | 5:15,520,592-15,523,170 | - | C1H5g24084 | CX5g037302 | LOC_Os05g31770 | Os05g0383000 | - | Detail |
| C2H5g25307 | 5:15,525,153-15,529,489 | - | C1H5g11233 | CX5g037753 | LOC_Os05g31780 | Os05g0383100 | - | Detail |
| C2H5g14308 | 5:15,538,760-15,540,058 | - | - | - | - | - | - | Detail |
| C2H5g16202 | 5:15,574,736-15,576,724 | - | C1H5g19817 | CX5g036890 | LOC_Os05g31910 | Os05g0384600 | - | Detail |
| C2H5g16221 | 5:15,581,921-15,590,244 | - | C1H5g14350 | CX5g039660 | LOC_Os05g31920 | Os05g0384800 | - | Detail |
| C2H5g19197 | 5:15,627,469-15,627,897 | - | C1H5g06780 | - | - | - | - | Detail |
| C2H5g28340 | 5:15,627,496-15,632,018 | + | C1H5g04647 | CX5g037630 | LOC_Os05g32060 | Os05g0386000 | - | Detail |
| C2H5g02326 | 5:15,640,943-15,642,543 | - | C1H5g24020 | CX5g038141 | LOC_Os05g32070 | Os05g0386201 | - | Detail |
| C2H5g13761 | 5:15,664,361-15,665,056 | + | C1H5g12810 | CX5g038936 | LOC_Os05g32100 | Os05g0386400 | - | Detail |
| C2H5g24568 | 5:15,672,836-15,676,421 | - | C1H5g22229 | CX5g036682 | LOC_Os05g32110 | Os05g0386800 | - | Detail |
| C2H5g06485 | 5:15,681,898-15,684,506 | + | C1H5g03117 | CX5g040992 | LOC_Os05g32120 | Os05g0386900 | - | Detail |
| C2H5g23057 | 5:15,685,598-15,688,002 | + | C1H5g30528 | CX5g038566 | LOC_Os05g32130 | - | - | Detail |
| C2H5g24262 | 5:15,692,006-15,696,365 | + | C1H5g26112 | CX5g040130 | LOC_Os05g32140 | Os05g0387200 | - | Detail |
| C2H5g10291 | 5:15,698,097-15,698,435 | - | C1H5g08301 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |