| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g03783 | 7:3,780,217-3,783,465 | - | C2H7g16319 | CX7g046571 | LOC_Os07g08430 | Os07g0182100 | - | Detail |
| C1H7g22816 | 7:3,789,335-3,792,475 | + | C2H7g13219 | CX7g046025 | LOC_Os07g08440 | Os07g0182200 | - | Detail |
| C1H7g08147 | 7:3,807,676-3,808,974 | - | C2H7g21054 | CX7g048026 | LOC_Os07g08460 | Os07g0182400 | - | Detail |
| C1H7g08163 | 7:3,832,487-3,833,275 | - | C2H7g27628 | CX7g049402 | - | Os07g0182601 | - | Detail |
| C1H7g17559 | 7:3,840,379-3,847,180 | + | C2H7g01878 | CX7g047392 | LOC_Os07g08500 | Os07g0182900 | MET1B, OsMET1b | Detail |
| C1H7g01208 | 7:3,883,980-3,887,626 | - | C2H7g05997 | CX7g049817 | LOC_Os07g08520 | Os07g0183100 | - | Detail |
| C1H7g01935 | 7:3,888,270-3,889,742 | + | C2H7g13555 | CX7g047842 | LOC_Os07g08530 | Os07g0183200 | - | Detail |
| C1H7g03119 | 7:3,909,043-3,910,595 | - | C2H7g11185 | CX7g049244 | LOC_Os07g08660 | Os03g0798600 | - | Detail |
| C1H7g16015 | 7:3,918,959-3,920,511 | + | C2H7g06349 | CX7g047415 | LOC_Os07g08710 | Os07g0184800 | OsATH1 | Detail |
| C1H7g09330 | 7:3,921,171-3,929,205 | + | C2H7g15936 | CX7g046514 | LOC_Os07g08729 | Os07g0184900 | - | Detail |
| C1H7g00026 | 7:3,931,908-3,934,880 | - | C2H7g05786 | CX7g048929 | LOC_Os07g08750 | Os07g0185000 | - | Detail |
| C1H7g02270 | 7:3,936,833-3,941,172 | - | C2H7g20869 | CX7g050270 | LOC_Os07g08760 | Os07g0185200 | - | Detail |
| C1H7g21233 | 7:3,960,432-3,966,423 | + | C2H7g09570 | CX7g050362 | LOC_Os07g08790 | Os07g0185432 | - | Detail |
| C1H7g04399 | 7:3,974,316-3,981,839 | + | C2H7g02745 | CX7g049699 | LOC_Os07g08810 | Os07g0185700 | - | Detail |
| C1H7g17793 | 7:3,985,947-3,989,076 | + | C2H7g29336 | CX7g048108 | LOC_Os07g08820 | Os07g0185800 | - | Detail |
| C1H7g13541 | 7:3,997,534-3,997,770 | - | C2H7g13139 | CX3g028966 | - | Os07g0185900 | - | Detail |
| C1H7g15110 | 7:4,004,800-4,006,586 | - | C2H7g30045 | CX7g047579 | LOC_Os07g08840 | Os07g0186000 | TRXH, trxh, Trx-H, OsTRXh1, OsTrxh1, Os1, OsTrx23, RPP13-1 | Detail |
| C1H7g31770 | 7:4,031,391-4,036,599 | + | C2H7g00916 | CX7g047241 | LOC_Os07g08880 | Os07g0186400 | OsSHL1 | Detail |
| C1H7g06257 | 7:4,038,943-4,041,663 | + | C2H7g24863 | CX7g047241 | LOC_Os07g08890 | Os07g0186500 | - | Detail |
| C1H7g14544 | 7:4,044,365-4,050,529 | + | C2H7g24828 | CX7g047294 | LOC_Os07g08950 | Os07g0187200 | OsD-LDH2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g26650 | 12:14,387,144-14,387,437 | - | C1H1g26536 | CX12g016337 | - | - | - | Detail |
| C2H12g01667 | 12:14,389,150-14,391,585 | + | C1H12g20928 | CX12g016423 | LOC_Os12g27830 | Os12g0464400 | - | Detail |
| C2H12g23283 | 12:14,399,954-14,400,682 | + | C1H12g16659 | CX12g015400 | LOC_Os12g27850 | Os12g0465000 | - | Detail |
| C2H12g13573 | 12:14,419,281-14,420,007 | + | C1H12g04307 | CX12g015400 | LOC_Os12g27930 | Os12g0465000 | - | Detail |
| C2H12g04383 | 12:14,428,183-14,428,734 | + | C1H12g22166 | CX12g015400 | LOC_Os12g27940 | Os12g0465100 | - | Detail |
| C2H12g28192 | 12:14,431,353-14,431,949 | + | C1H12g19521 | - | LOC_Os12g27950 | Os12g0465100 | - | Detail |
| C2H12g07320 | 12:14,435,945-14,436,289 | + | C1H12g13640 | - | LOC_Os12g27960 | Os12g0465100 | - | Detail |
| C2H12g28215 | 12:14,445,092-14,450,813 | - | C1H12g17057 | CX12g018630 | LOC_Os12g27994 | Os12g0465700 | DEC, dec*, dec | Detail |
| C2H12g24524 | 12:14,451,981-14,452,739 | - | C1H12g19519 | CX12g015187 | LOC_Os12g27994 | Os12g0465800 | - | Detail |
| C2H12g19909 | 12:14,495,204-14,497,717 | - | C1H12g26205 | CX12g017176 | LOC_Os11g28740 | Os06g0588450 | - | Detail |
| C2H12g22145 | 12:14,509,734-14,510,078 | + | C1H12g27314 | - | LOC_Os12g28090 | Os12g0467200 | - | Detail |
| C2H12g01579 | 12:14,513,303-14,514,457 | + | C1H12g20841 | CX12g015667 | LOC_Os12g28090 | Os12g0467200 | - | Detail |
| C2H12g20179 | 12:14,515,142-14,522,387 | - | C1H12g25561 | CX12g017740 | LOC_Os12g28100 | Os12g0467300 | - | Detail |
| C2H12g17782 | 12:14,546,370-14,547,905 | + | C1H12g05419 | CX12g016802 | LOC_Os12g28137 | Os12g0467700 | - | Detail |
| C2H12g27812 | 12:14,584,350-14,587,763 | + | C1H12g11838 | CX12g016836 | LOC_Os12g28260 | Os12g0468500 | OsCNGC5 | Detail |
| C2H12g16369 | 12:14,587,803-14,594,221 | - | C1H12g15040 | CX12g017240 | LOC_Os12g28270 | Os12g0468600 | - | Detail |
| C2H12g16438 | 12:14,614,487-14,618,504 | + | C1H12g25201 | CX12g017257 | LOC_Os02g17020 | - | - | Detail |
| C2H12g21911 | 12:14,654,850-14,656,373 | - | C1H12g09824 | CX12g016867 | LOC_Os12g28177 | Os12g0470700 | - | Detail |
| C2H12g20584 | 12:14,685,650-14,686,165 | + | C1H12g10027 | CX12g015400 | LOC_Os12g28750 | Os12g0472500 | OsTDL1A, MIL2 | Detail |
| C2H12g07430 | 12:14,709,709-14,712,096 | - | C1H12g13184 | CX12g015433 | LOC_Os12g28770 | Os12g0472800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |