| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g14072 | 7:3,230,992-3,232,240 | - | C2H7g06992 | CX7g047710 | LOC_Os07g07470 | Os07g0170100 | - | Detail |
| C1H7g03028 | 7:3,234,051-3,235,794 | + | C2H7g22441 | CX7g050139 | LOC_Os07g07480 | Os07g0170200 | - | Detail |
| C1H7g23823 | 7:3,236,102-3,240,733 | - | C2H7g19147 | CX7g047632 | LOC_Os07g07490 | Os07g0170300 | YTH10 | Detail |
| C1H7g11614 | 7:3,243,714-3,244,652 | - | C2H7g13685 | CX7g048057 | LOC_Os07g07500 | Os07g0170500 | - | Detail |
| C1H7g24798 | 7:3,253,204-3,257,563 | + | C2H7g26640 | CX7g049154 | LOC_Os07g07520 | Os07g0170800 | - | Detail |
| C1H7g24634 | 7:3,268,213-3,269,781 | + | C2H7g19751 | CX7g046745 | LOC_Os07g07540 | Os07g0171100 | OsXb22a | Detail |
| C1H7g06195 | 7:3,270,751-3,274,478 | - | C2H7g02309 | CX7g048847 | LOC_Os07g07550 | Os07g0171200 | - | Detail |
| C1H7g31145 | 7:3,280,573-3,287,069 | + | C2H7g29706 | CX7g049998 | LOC_Os07g07560 | Os07g0171300 | - | Detail |
| C1H7g26306 | 7:3,299,814-3,303,230 | + | C2H7g14506 | CX7g047532 | LOC_Os07g07580 | Os07g0172200 | - | Detail |
| C1H7g14038 | 7:3,309,036-3,312,166 | - | C2H7g26589 | CX7g046091 | LOC_Os07g07610 | Os07g0172500 | - | Detail |
| C1H7g15384 | 7:3,313,005-3,315,605 | - | C2H7g16081 | CX7g047681 | LOC_Os07g07620 | Os07g0172600 | OsSLA4 | Detail |
| C1H7g23957 | 7:3,317,585-3,318,599 | - | C2H7g12745 | CX7g048440 | LOC_Os07g07630 | - | - | Detail |
| C1H7g10408 | 7:3,324,899-3,327,126 | + | C2H7g07270 | CX7g047050 | LOC_Os07g07646 | Os03g0795100 | - | Detail |
| C1H7g05797 | 7:3,328,038-3,333,693 | + | C2H7g02138 | CX7g046232 | LOC_Os07g07654 | Os07g0172900 | - | Detail |
| C1H7g02387 | 7:3,340,921-3,343,844 | - | C2H7g04561 | CX7g047731 | LOC_Os07g07680 | Os07g0173200 | - | Detail |
| C1H7g10426 | 7:3,344,826-3,348,342 | + | C2H7g12974 | - | - | - | - | Detail |
| C1H7g12796 | 7:3,356,657-3,357,088 | + | - | - | - | - | - | Detail |
| C1H7g28770 | 7:3,357,099-3,365,145 | + | C2H7g24659 | CX7g049326 | LOC_Os07g07690 | Os07g0173300 | qCTB7 | Detail |
| C1H7g17950 | 7:3,369,294-3,371,517 | + | C2H7g08656 | CX7g047641 | LOC_Os07g07719 | Os07g0173501 | - | Detail |
| C1H7g09786 | 7:3,378,532-3,379,168 | + | C2H7g02287 | CX7g046457 | LOC_Os07g07790 | Os07g0174400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g06230 | 1:37,866,930-37,871,484 | + | C1H1g13352 | CX1g002939 | LOC_Os01g73670 | Os01g0967800 | - | Detail |
| C2H1g07305 | 1:37,871,954-37,875,965 | + | C1H1g07633 | CX1g005310 | LOC_Os01g73680 | Os01g0967900 | - | Detail |
| C2H1g24781 | 1:37,876,161-37,879,640 | - | C1H1g14048 | CX1g006659 | LOC_Os01g73690 | Os01g0968000 | - | Detail |
| C2H1g19836 | 1:37,880,656-37,881,725 | - | C1H1g07671 | CX1g001860 | LOC_Os01g73700 | Os01g0968100 | - | Detail |
| C2H1g12288 | 1:37,884,726-37,885,832 | - | C1H1g25633 | CX1g001112 | LOC_Os01g73710 | Os01g0968300 | - | Detail |
| C2H1g30656 | 1:37,887,127-37,888,202 | + | C1H1g15511 | CX1g005452 | LOC_Os01g73720 | Os01g0968300 | - | Detail |
| C2H1g10869 | 1:37,889,584-37,890,307 | - | - | - | - | - | - | Detail |
| C2H1g12190 | 1:37,891,424-37,892,541 | + | C1H1g06129 | CX1g004852 | LOC_Os01g73730 | Os01g0968400 | - | Detail |
| C2H1g03426 | 1:37,893,182-37,901,021 | + | C1H1g29656 | CX1g005277 | LOC_Os01g73750 | Os01g0968600 | - | Detail |
| C2H1g06476 | 1:37,901,194-37,903,663 | + | C1H1g20404 | CX1g005277 | LOC_Os01g73760 | Os01g0968700 | - | Detail |
| C2H1g09238 | 1:37,914,290-37,915,841 | - | C1H1g28424 | CX1g003644 | LOC_Os01g73780 | Os01g0969000 | - | Detail |
| C2H1g20740 | 1:37,916,404-37,919,935 | - | C1H1g31794 | CX1g006205 | LOC_Os01g73790 | Os01g0969100 | - | Detail |
| C2H1g09544 | 1:37,931,373-37,934,633 | + | C1H1g01507 | CX1g003584 | LOC_Os01g73880 | Os01g0970400 | - | Detail |
| C2H1g13571 | 1:37,936,699-37,937,995 | + | C1H1g08350 | CX1g002862 | LOC_Os01g73890 | Os01g0970500 | OsTFIIAgamma1, OsTFIIAγ1 | Detail |
| C2H1g20677 | 1:37,938,706-37,942,359 | - | C1H1g18423 | CX1g006271 | LOC_Os01g73900 | Os01g0970600 | OsRH58 | Detail |
| C2H1g02029 | 1:37,943,319-37,945,551 | - | C1H1g08408 | CX1g001477 | LOC_Os01g73910 | Os01g0970700 | - | Detail |
| C2H1g20906 | 1:37,946,433-37,951,438 | - | C1H1g27707 | CX1g000299 | LOC_Os01g73950 | Os01g0970900 | - | Detail |
| C2H1g18524 | 1:37,954,823-37,956,933 | + | C1H1g24776 | CX1g003601 | LOC_Os01g73960 | Os01g0971100 | OsDi19-5 | Detail |
| C2H1g12108 | 1:37,958,395-37,962,839 | - | C1H1g21855 | CX1g003985 | LOC_Os01g73970 | Os01g0971200 | - | Detail |
| C2H1g29254 | 1:37,965,185-37,966,963 | + | C1H1g24112 | CX1g001229 | LOC_Os01g73980 | Os01g0971400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |