| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g01183 | 7:3,083,384-3,085,623 | + | C2H7g29026 | CX7g049710 | - | - | - | Detail |
| C1H7g23721 | 7:3,092,475-3,095,262 | + | C2H7g16909 | CX7g049551 | - | - | - | Detail |
| C1H7g05391 | 7:3,109,783-3,111,891 | - | C2H7g04812 | CX7g049569 | LOC_Os07g06930 | Os07g0166500 | - | Detail |
| C1H7g22643 | 7:3,120,933-3,126,269 | + | C2H7g21113 | CX7g050299 | LOC_Os07g07230 | Os07g0166700 | - | Detail |
| C1H7g20925 | 7:3,126,917-3,131,402 | - | C2H7g24489 | CX7g046894 | LOC_Os07g07240 | Os07g0166800 | - | Detail |
| C1H7g28784 | 7:3,133,411-3,137,261 | + | C2H7g08428 | CX7g046720 | LOC_Os07g07250 | Os07g0167000 | - | Detail |
| C1H7g30457 | 7:3,138,623-3,148,456 | + | C2H7g21719 | CX7g047112 | LOC_Os07g07260 | Os07g0167100 | - | Detail |
| C1H7g24882 | 7:3,148,672-3,152,109 | - | C2H7g21242 | CX7g050218 | LOC_Os07g07270 | Os07g0167200 | - | Detail |
| C1H7g19293 | 7:3,153,980-3,155,021 | + | C2H7g17486 | CX7g046909 | LOC_Os07g07280 | Os07g0167300 | - | Detail |
| C1H7g09549 | 7:3,170,163-3,181,502 | - | C2H7g26058 | CX7g046534 | LOC_Os07g07310 | Os07g0168000 | - | Detail |
| C1H7g13022 | 7:3,192,775-3,196,132 | + | C2H7g07731 | CX7g050193 | LOC_Os07g07340 | Os07g0168600 | - | Detail |
| C1H7g31137 | 7:3,200,262-3,200,747 | - | C2H7g07319 | CX7g046780 | LOC_Os07g07350 | Os07g0168800 | ZFP177 | Detail |
| C1H7g11934 | 7:3,201,883-3,202,508 | - | - | - | - | - | - | Detail |
| C1H7g17268 | 7:3,207,054-3,207,542 | - | C2H7g20995 | CX7g047999 | LOC_Os07g07400 | Os07g0169500 | - | Detail |
| C1H7g28232 | 7:3,211,802-3,213,697 | + | C2H7g14770 | CX7g046317 | LOC_Os07g07410 | Os07g0169600 | - | Detail |
| C1H7g27542 | 7:3,214,498-3,217,039 | + | C2H7g13120 | CX7g046653 | LOC_Os07g07420 | Os07g0169700 | GA20OX3, OsGA20ox3, ga20ox3 | Detail |
| C1H7g28416 | 7:3,219,026-3,220,123 | - | C2H7g17670 | CX7g048611 | LOC_Os07g07430 | Os07g0169800 | - | Detail |
| C1H7g01686 | 7:3,222,818-3,223,597 | + | C2H7g21046 | CX7g048338 | LOC_Os07g07440 | Os07g0170000 | - | Detail |
| C1H7g19349 | 7:3,223,939-3,224,745 | - | C2H7g13629 | CX7g049509 | LOC_Os07g07450 | Os07g0561500 | - | Detail |
| C1H7g26848 | 7:3,227,754-3,230,753 | - | C2H7g25973 | CX7g047710 | LOC_Os07g07470 | Os07g0170100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24954 | 3:12,463,962-12,467,261 | + | C1H3g19204 | CX3g029989 | LOC_Os03g24730 | Os03g0362200 | - | Detail |
| C2H3g21455 | 3:12,474,431-12,477,062 | + | C1H3g31305 | CX3g027415 | LOC_Os03g24820 | Os03g0363100 | - | Detail |
| C2H3g21145 | 3:12,478,480-12,480,811 | + | C1H3g22124 | CX3g028253 | LOC_Os03g24830 | Os03g0363200 | - | Detail |
| C2H3g24910 | 3:12,484,109-12,485,941 | + | C1H3g12375 | CX3g025171 | LOC_Os03g24844 | Os03g0363400 | - | Detail |
| C2H3g07234 | 3:12,486,790-12,491,902 | - | C1H3g31412 | CX3g026007 | LOC_Os03g24860 | Os03g0363500 | - | Detail |
| C2H3g23765 | 3:12,493,279-12,498,033 | - | C1H3g09669 | CX3g026520 | LOC_Os03g24870 | Os03g0363600 | OsERD2 | Detail |
| C2H3g07525 | 3:12,499,946-12,503,343 | - | C1H3g25341 | CX3g026469 | LOC_Os03g24880 | Os03g0363700 | - | Detail |
| C2H3g30503 | 3:12,503,622-12,507,768 | + | C1H3g24559 | CX3g025654 | LOC_Os03g24890 | Os03g0363800 | OsSCL28 | Detail |
| C2H3g27719 | 3:12,511,027-12,515,472 | + | C1H3g28751 | CX3g026595 | LOC_Os03g24900 | Os03g0363900 | DHHC09, DHHC09-II | Detail |
| C2H3g02370 | 3:12,516,096-12,518,735 | - | C1H3g13730 | CX3g027300 | LOC_Os03g24910 | Os03g0363950 | - | Detail |
| C2H3g17587 | 3:12,524,315-12,526,950 | - | C1H3g05488 | CX3g025659 | LOC_Os03g24920 | Os03g0364000 | - | Detail |
| C2H3g05857 | 3:12,533,660-12,535,295 | + | C1H3g09584 | CX3g031356 | LOC_Os03g24930 | Os03g0364400 | - | Detail |
| C2H3g14199 | 3:12,540,077-12,547,571 | - | C1H3g19834 | CX3g025767 | LOC_Os03g24940 | Os03g0364500 | - | Detail |
| C2H3g02255 | 3:12,571,730-12,574,717 | + | C1H3g08779 | CX3g028963 | LOC_Os03g24950 | Os03g0364700 | - | Detail |
| C2H3g14794 | 3:12,585,885-12,586,145 | + | C1H3g20332 | CX3g025793 | LOC_Os03g24960 | Os03g0365000 | - | Detail |
| C2H3g19293 | 3:12,592,693-12,595,828 | + | C1H3g24694 | CX3g025793 | LOC_Os03g25000 | Os03g0365000 | - | Detail |
| C2H3g11722 | 3:12,611,705-12,614,922 | + | C1H3g24694 | CX3g025793 | LOC_Os03g25030 | Os03g0365800 | HTA1 | Detail |
| C2H3g14009 | 3:12,616,174-12,619,558 | + | C1H3g02602 | CX3g030240 | LOC_Os03g25040 | Os03g0365900 | - | Detail |
| C2H3g02613 | 3:12,620,568-12,623,197 | - | C1H3g23692 | CX3g028892 | LOC_Os03g25050 | Os03g0366000 | - | Detail |
| C2H3g02942 | 3:12,643,981-12,651,288 | + | C1H3g05133 | CX3g026420 | LOC_Os03g25070 | Os03g0366200 | OsCBK | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |