| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g06281 | 7:2,870,934-2,884,230 | - | C2H7g15677 | CX7g049022 | LOC_Os07g06890 | Os07g0163000 | OsD-LDH, D-LDH, OsD-LDH-Tr | Detail |
| C1H7g10831 | 7:2,883,733-2,884,255 | + | - | - | - | Os07g0163066 | - | Detail |
| C1H7g03136 | 7:2,887,002-2,889,311 | - | C2H7g11414 | CX7g046953 | LOC_Os07g06900 | Os07g0163200 | - | Detail |
| C1H7g06104 | 7:2,892,038-2,893,416 | - | C2H7g28250 | CX7g050145 | LOC_Os07g06910 | - | - | Detail |
| C1H7g10635 | 7:2,906,228-2,918,414 | + | C2H7g28897 | CX7g047813 | LOC_Os07g06940 | Os07g0163500 | WP1, OsValRS2, ValRS2 | Detail |
| C1H7g30562 | 7:2,926,314-2,938,047 | + | C2H7g16342 | CX7g047695 | LOC_Os07g06950 | Os07g0163800 | - | Detail |
| C1H7g13389 | 7:2,942,767-2,948,162 | - | C2H7g12803 | CX7g046501 | LOC_Os07g06970 | Os07g0164000 | WAF1, waf1, waf1-1, waf1-2, HEN1 | Detail |
| C1H7g24937 | 7:2,949,503-2,958,519 | - | C2H7g02116 | CX7g046855 | LOC_Os07g06980 | Os07g0164100 | HDA704 | Detail |
| C1H7g12322 | 7:2,958,769-2,959,858 | + | C2H7g16406 | CX7g048709 | LOC_Os07g06990 | Os07g0164200 | - | Detail |
| C1H7g16672 | 7:2,959,938-2,963,936 | - | C2H7g19812 | CX7g048627 | LOC_Os07g07000 | Os07g0164300 | OsSYP131a | Detail |
| C1H7g03242 | 7:2,966,683-2,969,912 | + | C2H7g13004 | CX7g047735 | LOC_Os07g07010 | Os07g0164500 | - | Detail |
| C1H7g21914 | 7:2,972,390-2,973,941 | + | C2H7g29770 | CX7g048909 | LOC_Os07g07020 | Os07g0164600 | - | Detail |
| C1H7g10253 | 7:2,979,263-2,981,271 | + | C2H7g22158 | CX7g050369 | LOC_Os07g07040 | Os07g0164800 | - | Detail |
| C1H7g18807 | 7:2,982,037-2,989,129 | - | C2H7g29990 | CX7g048267 | LOC_Os07g07050 | Os07g0164900 | - | Detail |
| C1H7g00647 | 7:2,991,445-2,995,951 | + | C2H7g08797 | CX7g048340 | LOC_Os07g07060 | Os07g0165000 | - | Detail |
| C1H7g27659 | 7:2,996,482-2,999,586 | - | C2H7g24346 | CX7g049088 | LOC_Os07g07070 | Os07g0165100 | - | Detail |
| C1H7g00683 | 7:3,002,443-3,009,769 | - | C2H7g29244 | CX7g049607 | LOC_Os07g07080 | Os07g0165200 | - | Detail |
| C1H7g28591 | 7:3,018,602-3,020,127 | + | - | - | LOC_Os07g07094 | Os07g0165300 | - | Detail |
| C1H7g18135 | 7:3,021,815-3,023,696 | - | - | - | LOC_Os07g07150 | Os07g0165700 | - | Detail |
| C1H7g08593 | 7:3,045,478-3,046,564 | + | C2H7g28487 | CX7g046732 | LOC_Os07g07170 | Os07g0165900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g11798 | 4:1,124,649-1,128,518 | - | C1H4g10566 | CX4g034307 | LOC_Os04g02870 | Os04g0118900 | OsRS29 | Detail |
| C2H4g23600 | 4:1,131,652-1,132,049 | + | C1H4g26984 | CX4g036463 | LOC_Os04g02880 | Os04g0119000 | - | Detail |
| C2H4g06483 | 4:1,135,404-1,138,916 | + | C1H4g01097 | CX4g034760 | LOC_Os04g02900 | Os04g0119400 | FLO19 | Detail |
| C2H4g08482 | 4:1,145,142-1,148,607 | - | C1H4g24475 | CX4g032462 | LOC_Os04g02910 | Os04g0119500 | - | Detail |
| C2H4g19285 | 4:1,154,978-1,161,417 | + | C1H4g07943 | CX4g031645 | LOC_Os04g02920 | Os04g0119800 | - | Detail |
| C2H4g21106 | 4:1,166,025-1,177,702 | + | C1H4g25987 | CX4g031516 | LOC_Os04g02970 | Os04g0120100 | - | Detail |
| C2H4g08717 | 4:1,184,517-1,187,776 | + | C1H4g01619 | CX4g032545 | LOC_Os04g03050 | Os04g0121100 | - | Detail |
| C2H4g29838 | 4:1,190,062-1,193,625 | + | C1H4g07856 | CX4g032545 | LOC_Os04g02980 | Os04g0120300 | - | Detail |
| C2H4g17654 | 4:1,194,853-1,197,241 | - | C1H7g21500 | - | - | - | - | Detail |
| C2H4g27942 | 4:1,197,531-1,200,807 | - | - | - | - | - | - | Detail |
| C2H4g30144 | 4:1,202,021-1,202,920 | + | C1H4g16515 | - | LOC_Os04g02960 | Os04g0120350 | - | Detail |
| C2H4g04444 | 4:1,222,630-1,233,043 | + | C1H4g21533 | CX4g034661 | LOC_Os04g03050 | Os04g0121100 | - | Detail |
| C2H4g12397 | 4:1,235,796-1,241,151 | + | C1H4g12053 | CX4g032499 | LOC_Os04g03100 | Os04g0121300 | - | Detail |
| C2H4g01070 | 4:1,243,446-1,243,763 | + | C1H4g15960 | CX4g036276 | - | Os04g0687100 | - | Detail |
| C2H4g22856 | 4:1,245,684-1,248,637 | + | C1H4g21418 | CX4g033795 | LOC_Os04g03164 | Os04g0121800 | - | Detail |
| C2H4g10665 | 4:1,258,187-1,258,677 | + | C1H4g21418 | CX4g033795 | LOC_Os04g03164 | Os04g0121800 | - | Detail |
| C2H4g05913 | 4:1,269,529-1,270,350 | - | C1H4g29860 | CX4g034990 | LOC_Os04g03180 | Os04g0122000 | - | Detail |
| C2H4g12847 | 4:1,272,702-1,276,640 | - | C1H4g15787 | CX4g033551 | LOC_Os04g03210 | Os04g0122200 | - | Detail |
| C2H4g15957 | 4:1,282,541-1,283,773 | + | C1H4g18927 | CX4g035223 | LOC_Os04g03320 | Os04g0123125 | - | Detail |
| C2H4g25246 | 4:1,306,786-1,316,515 | + | C1H4g15411 | CX4g033227 | LOC_Os04g03810 | Os04g0127200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |