| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g06281 | 7:2,870,934-2,884,230 | - | C2H7g15677 | CX7g049022 | LOC_Os07g06890 | Os07g0163000 | OsD-LDH, D-LDH, OsD-LDH-Tr | Detail |
| C1H7g10831 | 7:2,883,733-2,884,255 | + | - | - | - | Os07g0163066 | - | Detail |
| C1H7g03136 | 7:2,887,002-2,889,311 | - | C2H7g11414 | CX7g046953 | LOC_Os07g06900 | Os07g0163200 | - | Detail |
| C1H7g06104 | 7:2,892,038-2,893,416 | - | C2H7g28250 | CX7g050145 | LOC_Os07g06910 | - | - | Detail |
| C1H7g10635 | 7:2,906,228-2,918,414 | + | C2H7g28897 | CX7g047813 | LOC_Os07g06940 | Os07g0163500 | WP1, OsValRS2, ValRS2 | Detail |
| C1H7g30562 | 7:2,926,314-2,938,047 | + | C2H7g16342 | CX7g047695 | LOC_Os07g06950 | Os07g0163800 | - | Detail |
| C1H7g13389 | 7:2,942,767-2,948,162 | - | C2H7g12803 | CX7g046501 | LOC_Os07g06970 | Os07g0164000 | WAF1, waf1, waf1-1, waf1-2, HEN1 | Detail |
| C1H7g24937 | 7:2,949,503-2,958,519 | - | C2H7g02116 | CX7g046855 | LOC_Os07g06980 | Os07g0164100 | HDA704 | Detail |
| C1H7g12322 | 7:2,958,769-2,959,858 | + | C2H7g16406 | CX7g048709 | LOC_Os07g06990 | Os07g0164200 | - | Detail |
| C1H7g16672 | 7:2,959,938-2,963,936 | - | C2H7g19812 | CX7g048627 | LOC_Os07g07000 | Os07g0164300 | OsSYP131a | Detail |
| C1H7g03242 | 7:2,966,683-2,969,912 | + | C2H7g13004 | CX7g047735 | LOC_Os07g07010 | Os07g0164500 | - | Detail |
| C1H7g21914 | 7:2,972,390-2,973,941 | + | C2H7g29770 | CX7g048909 | LOC_Os07g07020 | Os07g0164600 | - | Detail |
| C1H7g10253 | 7:2,979,263-2,981,271 | + | C2H7g22158 | CX7g050369 | LOC_Os07g07040 | Os07g0164800 | - | Detail |
| C1H7g18807 | 7:2,982,037-2,989,129 | - | C2H7g29990 | CX7g048267 | LOC_Os07g07050 | Os07g0164900 | - | Detail |
| C1H7g00647 | 7:2,991,445-2,995,951 | + | C2H7g08797 | CX7g048340 | LOC_Os07g07060 | Os07g0165000 | - | Detail |
| C1H7g27659 | 7:2,996,482-2,999,586 | - | C2H7g24346 | CX7g049088 | LOC_Os07g07070 | Os07g0165100 | - | Detail |
| C1H7g00683 | 7:3,002,443-3,009,769 | - | C2H7g29244 | CX7g049607 | LOC_Os07g07080 | Os07g0165200 | - | Detail |
| C1H7g28591 | 7:3,018,602-3,020,127 | + | - | - | LOC_Os07g07094 | Os07g0165300 | - | Detail |
| C1H7g18135 | 7:3,021,815-3,023,696 | - | - | - | LOC_Os07g07150 | Os07g0165700 | - | Detail |
| C1H7g08593 | 7:3,045,478-3,046,564 | + | C2H7g28487 | CX7g046732 | LOC_Os07g07170 | Os07g0165900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g27506 | 6:2,837,533-2,838,097 | + | C1H6g17960 | CX6g041729 | - | - | - | Detail |
| C2H6g16420 | 6:2,850,644-2,852,146 | + | C1H6g19331 | CX6g044087 | LOC_Os06g07450 | Os06g0170866 | - | Detail |
| C2H6g11064 | 6:2,854,373-2,854,702 | + | C1H6g05846 | - | - | - | - | Detail |
| C2H6g12470 | 6:2,868,471-2,869,052 | + | - | CX6g045326 | LOC_Os06g07470 | Os06g0171500 | - | Detail |
| C2H6g12040 | 6:2,870,793-2,878,448 | - | C1H6g19224 | CX6g045600 | LOC_Os06g07474 | Os06g0171600 | - | Detail |
| C2H6g23378 | 6:2,878,719-2,880,475 | + | C1H6g18552 | CX6g042658 | LOC_Os06g07480 | Os06g0171700 | - | Detail |
| C2H6g24054 | 6:2,880,865-2,887,610 | - | C1H6g25044 | CX6g044064 | LOC_Os06g07490 | Os06g0171800 | - | Detail |
| C2H6g04632 | 6:2,890,445-2,897,166 | + | C1H6g16236 | CX6g042998 | LOC_Os06g07540 | Os06g0171900 | - | Detail |
| C2H6g18436 | 6:2,897,870-2,900,764 | + | C1H6g10657 | CX6g044733 | LOC_Os06g07550 | Os06g0172000 | - | Detail |
| C2H6g03204 | 6:2,907,092-2,907,799 | + | C1H6g08505 | CX6g045382 | LOC_Os06g07560 | Os06g0172200 | - | Detail |
| C2H6g06251 | 6:2,910,483-2,910,746 | + | C1H6g22975 | CX6g041584 | LOC_Os06g07580 | Os06g0172600 | - | Detail |
| C2H6g11115 | 6:2,928,887-2,932,329 | - | C1H6g28387 | CX6g045868 | LOC_Os06g07600 | Os06g0172800 | - | Detail |
| C2H6g28357 | 6:2,935,884-2,941,735 | + | C1H6g29081 | CX6g045385 | LOC_Os06g07620 | Os06g0173000 | - | Detail |
| C2H6g02209 | 6:2,943,784-2,948,442 | + | C1H6g24053 | CX6g043458 | LOC_Os06g07630 | Os06g0173100 | OsRpt5b | Detail |
| C2H6g14609 | 6:2,964,354-2,966,214 | - | C1H6g10438 | CX6g044658 | LOC_Os06g07700 | Os06g0173800 | - | Detail |
| C2H6g29331 | 6:2,987,280-2,989,272 | + | C1H6g24712 | CX6g041809 | LOC_Os06g07760 | Os06g0174300 | - | Detail |
| C2H6g13115 | 6:2,990,994-2,992,989 | + | C1H6g20008 | CX6g043121 | LOC_Os06g07770 | Os06g0174350 | - | Detail |
| C2H6g24511 | 6:2,996,113-3,002,335 | + | C1H6g25449 | CX6g043121 | LOC_Os06g07770 | Os06g0174375 | - | Detail |
| C2H6g26780 | 6:3,003,093-3,005,524 | - | C1H6g24998 | CX6g044484 | LOC_Os06g07780 | Os06g0174400 | - | Detail |
| C2H6g01504 | 6:3,009,091-3,009,282 | + | C1H6g18194 | - | LOC_Os06g07800 | Os06g0174900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |