| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g16794 | 7:2,334,965-2,336,994 | - | C2H7g02960 | CX7g047492 | LOC_Os07g05830 | Os07g0153000 | OsJAZ2, OsTIFY5 | Detail |
| C1H7g10082 | 7:2,342,344-2,346,172 | - | C2H7g17210 | CX7g047880 | LOC_Os07g05870 | Os07g0153300 | - | Detail |
| C1H7g03664 | 7:2,347,556-2,349,979 | - | C2H7g13226 | CX7g049166 | LOC_Os07g05880 | Os07g0153400 | - | Detail |
| C1H7g01936 | 7:2,428,259-2,428,747 | + | C2H7g05715 | - | - | - | - | Detail |
| C1H7g01875 | 7:2,453,216-2,453,668 | - | C2H7g03000 | CX7g050071 | LOC_Os07g05900 | Os07g0153600 | PROG1, prog1 | Detail |
| C1H7g09544 | 7:2,484,418-2,484,891 | - | C2H7g10314 | - | - | - | - | Detail |
| C1H7g12914 | 7:2,491,213-2,491,755 | - | C2H7g12673 | - | LOC_Os07g05900 | Os07g0153600 | PROG1, prog1 | Detail |
| C1H7g29401 | 7:2,504,330-2,507,220 | - | - | - | LOC_Os06g16040 | Os06g0271400 | - | Detail |
| C1H7g22209 | 7:2,540,310-2,550,198 | - | C2H7g00344 | CX7g047139 | LOC_Os07g05960 | Os07g0154400 | - | Detail |
| C1H7g06221 | 7:2,557,042-2,560,302 | - | C2H7g10712 | CX7g049975 | LOC_Os07g06060 | Os07g0154800 | - | Detail |
| C1H7g06093 | 7:2,560,907-2,562,362 | + | C2H7g27762 | CX7g046175 | LOC_Os07g06080 | Os07g0155100 | - | Detail |
| C1H7g27216 | 7:2,562,736-2,565,575 | - | C2H7g04281 | CX7g049141 | LOC_Os07g06090 | Os07g0155200 | - | Detail |
| C1H7g27246 | 7:2,580,351-2,587,143 | + | C2H7g16139 | CX7g048977 | LOC_Os07g06130 | Os07g0155600 | EIN2, OsEIN2 | Detail |
| C1H7g16025 | 7:2,616,742-2,619,698 | + | C2H7g21210 | CX7g049954 | LOC_Os07g06175 | Os07g0156200 | - | Detail |
| C1H7g20770 | 7:2,627,866-2,628,090 | + | C2H7g08069 | CX7g046410 | LOC_Os07g06300 | Os07g0157000 | - | Detail |
| C1H7g16454 | 7:2,630,784-2,631,539 | + | C2H7g09918 | CX7g048951 | LOC_Os07g06190 | Os07g0157000 | - | Detail |
| C1H7g22924 | 7:2,636,181-2,637,999 | - | C2H7g30454 | - | LOC_Os07g06390 | Os07g0157700 | - | Detail |
| C1H7g06476 | 7:2,638,354-2,638,634 | - | C2H7g19895 | - | - | - | - | Detail |
| C1H7g22863 | 7:2,640,851-2,644,072 | + | C2H7g18578 | CX7g049267 | LOC_Os07g06410 | Os07g0157900 | - | Detail |
| C1H7g07818 | 7:2,644,805-2,645,023 | + | C2H7g14020 | - | LOC_Os07g06420 | Os07g0158000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g03888 | 4:28,295,410-28,295,805 | - | C1H4g29756 | CX4g033466 | LOC_Os04g55170 | Os04g0554500 | OsR3L1, OsHyPRP06/R3L1, OsHyPRP06 | Detail |
| C2H4g28358 | 4:28,299,164-28,310,153 | - | C1H4g08012 | CX4g036449 | LOC_Os04g55190 | Os04g0644675 | - | Detail |
| C2H4g15694 | 4:28,314,152-28,316,257 | + | C1H4g06360 | CX4g033425 | LOC_Os04g55200 | Os04g0644700 | - | Detail |
| C2H4g05660 | 4:28,317,215-28,322,007 | + | C1H4g02968 | CX4g032169 | LOC_Os04g55210 | Os04g0644800 | - | Detail |
| C2H4g12779 | 4:28,327,588-28,332,623 | + | C1H4g08695 | CX4g032248 | LOC_Os04g55220 | Os04g0644900 | - | Detail |
| C2H4g19510 | 4:28,335,294-28,348,459 | + | C1H4g06283 | CX4g033214 | LOC_Os04g55230 | Os04g0645100 | - | Detail |
| C2H4g14418 | 4:28,351,996-28,352,583 | - | C1H4g18694 | CX4g032908 | LOC_Os04g55240 | Os04g0645200 | - | Detail |
| C2H4g22066 | 4:28,355,865-28,356,620 | + | - | CX4g031778 | LOC_Os04g55250 | Os04g0645500 | - | Detail |
| C2H4g01093 | 4:28,356,757-28,360,600 | - | C1H4g06884 | CX4g036437 | LOC_Os04g55260 | Os04g0645600 | - | Detail |
| C2H4g27076 | 4:28,366,816-28,370,143 | - | C1H4g28592 | CX4g032085 | LOC_Os04g55280 | Os04g0646050 | - | Detail |
| C2H4g00324 | 4:28,370,940-28,372,339 | - | C1H4g12666 | CX4g031654 | LOC_Os04g55290 | Os04g0646100 | - | Detail |
| C2H4g28891 | 4:28,404,351-28,405,010 | - | C1H4g04933 | CX4g032699 | LOC_Os04g55360 | Os04g0647300 | - | Detail |
| C2H4g25523 | 4:28,405,169-28,407,565 | - | C1H4g01013 | CX4g032699 | LOC_Os04g55360 | Os04g0647300 | - | Detail |
| C2H4g00723 | 4:28,428,202-28,432,244 | - | C1H4g17955 | CX4g032705 | LOC_Os04g55410 | Os04g0647800 | - | Detail |
| C2H4g03628 | 4:28,435,119-28,438,284 | + | C1H4g25822 | CX4g034505 | LOC_Os04g55420 | Os04g0647900 | - | Detail |
| C2H4g20686 | 4:28,441,751-28,444,579 | + | C1H4g16013 | CX4g034215 | LOC_Os04g55440 | Os04g0648200 | - | Detail |
| C2H4g26419 | 4:28,449,270-28,454,054 | - | C1H4g25119 | CX4g031467 | LOC_Os04g55480 | Os04g0648500 | - | Detail |
| C2H4g12403 | 4:28,455,832-28,456,650 | + | - | CX4g034038 | LOC_Os04g55490 | Os04g0648600 | - | Detail |
| C2H4g12616 | 4:28,459,506-28,465,690 | + | C1H4g03048 | CX4g032703 | LOC_Os04g55500 | Os04g0648700 | - | Detail |
| C2H4g21483 | 4:28,474,766-28,480,256 | + | C1H4g02593 | CX4g033088 | LOC_Os04g55510 | Os04g0648800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |