| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g16794 | 7:2,334,965-2,336,994 | - | C2H7g02960 | CX7g047492 | LOC_Os07g05830 | Os07g0153000 | OsJAZ2, OsTIFY5 | Detail |
| C1H7g10082 | 7:2,342,344-2,346,172 | - | C2H7g17210 | CX7g047880 | LOC_Os07g05870 | Os07g0153300 | - | Detail |
| C1H7g03664 | 7:2,347,556-2,349,979 | - | C2H7g13226 | CX7g049166 | LOC_Os07g05880 | Os07g0153400 | - | Detail |
| C1H7g01936 | 7:2,428,259-2,428,747 | + | C2H7g05715 | - | - | - | - | Detail |
| C1H7g01875 | 7:2,453,216-2,453,668 | - | C2H7g03000 | CX7g050071 | LOC_Os07g05900 | Os07g0153600 | PROG1, prog1 | Detail |
| C1H7g09544 | 7:2,484,418-2,484,891 | - | C2H7g10314 | - | - | - | - | Detail |
| C1H7g12914 | 7:2,491,213-2,491,755 | - | C2H7g12673 | - | LOC_Os07g05900 | Os07g0153600 | PROG1, prog1 | Detail |
| C1H7g29401 | 7:2,504,330-2,507,220 | - | - | - | LOC_Os06g16040 | Os06g0271400 | - | Detail |
| C1H7g22209 | 7:2,540,310-2,550,198 | - | C2H7g00344 | CX7g047139 | LOC_Os07g05960 | Os07g0154400 | - | Detail |
| C1H7g06221 | 7:2,557,042-2,560,302 | - | C2H7g10712 | CX7g049975 | LOC_Os07g06060 | Os07g0154800 | - | Detail |
| C1H7g06093 | 7:2,560,907-2,562,362 | + | C2H7g27762 | CX7g046175 | LOC_Os07g06080 | Os07g0155100 | - | Detail |
| C1H7g27216 | 7:2,562,736-2,565,575 | - | C2H7g04281 | CX7g049141 | LOC_Os07g06090 | Os07g0155200 | - | Detail |
| C1H7g27246 | 7:2,580,351-2,587,143 | + | C2H7g16139 | CX7g048977 | LOC_Os07g06130 | Os07g0155600 | EIN2, OsEIN2 | Detail |
| C1H7g16025 | 7:2,616,742-2,619,698 | + | C2H7g21210 | CX7g049954 | LOC_Os07g06175 | Os07g0156200 | - | Detail |
| C1H7g20770 | 7:2,627,866-2,628,090 | + | C2H7g08069 | CX7g046410 | LOC_Os07g06300 | Os07g0157000 | - | Detail |
| C1H7g16454 | 7:2,630,784-2,631,539 | + | C2H7g09918 | CX7g048951 | LOC_Os07g06190 | Os07g0157000 | - | Detail |
| C1H7g22924 | 7:2,636,181-2,637,999 | - | C2H7g30454 | - | LOC_Os07g06390 | Os07g0157700 | - | Detail |
| C1H7g06476 | 7:2,638,354-2,638,634 | - | C2H7g19895 | - | - | - | - | Detail |
| C1H7g22863 | 7:2,640,851-2,644,072 | + | C2H7g18578 | CX7g049267 | LOC_Os07g06410 | Os07g0157900 | - | Detail |
| C1H7g07818 | 7:2,644,805-2,645,023 | + | C2H7g14020 | - | LOC_Os07g06420 | Os07g0158000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g03322 | 3:27,340,934-27,343,315 | - | C1H3g30625 | CX3g030181 | LOC_Os03g51950 | Os03g0729200 | - | Detail |
| C2H3g24100 | 3:27,345,488-27,347,402 | - | C1H3g13523 | CX3g029650 | LOC_Os03g51960 | Os03g0729300 | - | Detail |
| C2H3g29250 | 3:27,369,741-27,373,697 | + | C1H3g25309 | CX3g026395 | LOC_Os03g51970 | Os03g0729500 | GRF6, OsGRF6 | Detail |
| C2H3g12464 | 3:27,375,331-27,376,252 | - | C1H3g03104 | - | - | - | - | Detail |
| C2H3g18708 | 3:27,376,638-27,379,340 | + | C1H3g10749 | CX3g025921 | LOC_Os03g51984 | Os03g0729700 | - | Detail |
| C2H3g00085 | 3:27,384,328-27,384,774 | + | C1H3g20671 | CX3g030041 | LOC_Os03g51990 | Os03g0729800 | - | Detail |
| C2H3g30065 | 3:27,384,854-27,386,330 | + | C1H3g23285 | CX3g030041 | LOC_Os03g51990 | Os03g0729800 | - | Detail |
| C2H3g12843 | 3:27,386,439-27,391,421 | - | C1H3g08051 | CX3g029030 | LOC_Os03g52000 | Os03g0729900 | - | Detail |
| C2H3g06578 | 3:27,394,137-27,395,989 | - | C1H3g02659 | CX3g026263 | LOC_Os03g52010 | Os03g0730000 | - | Detail |
| C2H3g03305 | 3:27,404,886-27,410,696 | + | C1H3g27135 | CX3g025486 | LOC_Os03g52040 | Os03g0730400 | - | Detail |
| C2H3g11768 | 3:27,417,648-27,422,103 | + | C1H3g19587 | CX3g025486 | LOC_Os03g52070 | Os03g0730500 | - | Detail |
| C2H3g24985 | 3:27,427,449-27,433,104 | + | C1H3g15717 | CX3g025486 | LOC_Os03g52080 | Os03g0730700 | - | Detail |
| C2H3g15444 | 3:27,435,408-27,458,540 | - | C1H3g25117 | CX3g030109 | LOC_Os03g52090 | Os03g0730800 | - | Detail |
| C2H3g30622 | 3:27,461,075-27,464,152 | + | C1H3g02569 | CX3g024994 | LOC_Os03g52120 | Os03g0731050 | - | Detail |
| C2H3g14888 | 3:27,464,946-27,465,970 | + | C1H3g13296 | CX3g027975 | LOC_Os03g52130 | Os03g0731100 | - | Detail |
| C2H3g15813 | 3:27,470,789-27,480,513 | + | C1H3g30965 | CX3g026280 | LOC_Os03g52150 | Os03g0731500 | - | Detail |
| C2H3g18334 | 3:27,480,972-27,482,527 | + | C1H3g29781 | CX3g025632 | LOC_Os03g52160 | Os03g0731800 | - | Detail |
| C2H3g17469 | 3:27,482,637-27,485,949 | - | C1H3g24484 | CX3g027993 | LOC_Os03g52170 | Os03g0731900 | OsHMBPP, LAS1, LAS1/OsHMBPP | Detail |
| C2H3g17794 | 3:27,489,179-27,493,171 | - | C1H3g05748 | CX3g028410 | LOC_Os03g52180 | Os03g0732000 | OsIspH2 | Detail |
| C2H3g20028 | 3:27,520,491-27,530,041 | + | C1H3g07434 | CX3g027773 | LOC_Os03g52239 | Os03g0732100 | ROSES1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |