| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g16794 | 7:2,334,965-2,336,994 | - | C2H7g02960 | CX7g047492 | LOC_Os07g05830 | Os07g0153000 | OsJAZ2, OsTIFY5 | Detail |
| C1H7g10082 | 7:2,342,344-2,346,172 | - | C2H7g17210 | CX7g047880 | LOC_Os07g05870 | Os07g0153300 | - | Detail |
| C1H7g03664 | 7:2,347,556-2,349,979 | - | C2H7g13226 | CX7g049166 | LOC_Os07g05880 | Os07g0153400 | - | Detail |
| C1H7g01936 | 7:2,428,259-2,428,747 | + | C2H7g05715 | - | - | - | - | Detail |
| C1H7g01875 | 7:2,453,216-2,453,668 | - | C2H7g03000 | CX7g050071 | LOC_Os07g05900 | Os07g0153600 | PROG1, prog1 | Detail |
| C1H7g09544 | 7:2,484,418-2,484,891 | - | C2H7g10314 | - | - | - | - | Detail |
| C1H7g12914 | 7:2,491,213-2,491,755 | - | C2H7g12673 | - | LOC_Os07g05900 | Os07g0153600 | PROG1, prog1 | Detail |
| C1H7g29401 | 7:2,504,330-2,507,220 | - | - | - | LOC_Os06g16040 | Os06g0271400 | - | Detail |
| C1H7g22209 | 7:2,540,310-2,550,198 | - | C2H7g00344 | CX7g047139 | LOC_Os07g05960 | Os07g0154400 | - | Detail |
| C1H7g06221 | 7:2,557,042-2,560,302 | - | C2H7g10712 | CX7g049975 | LOC_Os07g06060 | Os07g0154800 | - | Detail |
| C1H7g06093 | 7:2,560,907-2,562,362 | + | C2H7g27762 | CX7g046175 | LOC_Os07g06080 | Os07g0155100 | - | Detail |
| C1H7g27216 | 7:2,562,736-2,565,575 | - | C2H7g04281 | CX7g049141 | LOC_Os07g06090 | Os07g0155200 | - | Detail |
| C1H7g27246 | 7:2,580,351-2,587,143 | + | C2H7g16139 | CX7g048977 | LOC_Os07g06130 | Os07g0155600 | EIN2, OsEIN2 | Detail |
| C1H7g16025 | 7:2,616,742-2,619,698 | + | C2H7g21210 | CX7g049954 | LOC_Os07g06175 | Os07g0156200 | - | Detail |
| C1H7g20770 | 7:2,627,866-2,628,090 | + | C2H7g08069 | CX7g046410 | LOC_Os07g06300 | Os07g0157000 | - | Detail |
| C1H7g16454 | 7:2,630,784-2,631,539 | + | C2H7g09918 | CX7g048951 | LOC_Os07g06190 | Os07g0157000 | - | Detail |
| C1H7g22924 | 7:2,636,181-2,637,999 | - | C2H7g30454 | - | LOC_Os07g06390 | Os07g0157700 | - | Detail |
| C1H7g06476 | 7:2,638,354-2,638,634 | - | C2H7g19895 | - | - | - | - | Detail |
| C1H7g22863 | 7:2,640,851-2,644,072 | + | C2H7g18578 | CX7g049267 | LOC_Os07g06410 | Os07g0157900 | - | Detail |
| C1H7g07818 | 7:2,644,805-2,645,023 | + | C2H7g14020 | - | LOC_Os07g06420 | Os07g0158000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g19834 | 2:25,897,490-25,898,188 | + | C1H2g17371 | CX2g019917 | LOC_Os02g45880 | Os02g0684000 | - | Detail |
| C2H2g12350 | 2:25,906,290-25,907,369 | - | C1H2g00614 | CX2g020719 | LOC_Os02g45890 | Os02g0684100 | - | Detail |
| C2H2g27051 | 2:25,916,250-25,919,973 | - | C1H2g03932 | CX2g020860 | LOC_Os02g45910 | Os02g0684150 | OsDNA2_15 | Detail |
| C2H2g04078 | 2:25,923,590-25,928,192 | + | C1H2g09273 | CX2g021780 | LOC_Os02g45920 | Os02g0684300 | - | Detail |
| C2H2g07890 | 2:25,928,444-25,929,087 | - | C1H2g23248 | CX2g023573 | LOC_Os02g45930 | Os02g0684400 | - | Detail |
| C2H2g23208 | 2:25,933,967-25,934,278 | - | C1H2g07518 | CX2g023547 | LOC_Os02g45940 | Os02g0684500 | - | Detail |
| C2H2g03417 | 2:25,934,838-25,937,935 | + | C1H2g17890 | CX2g023866 | LOC_Os02g45950 | Os02g0684600 | - | Detail |
| C2H2g24497 | 2:25,938,557-25,939,423 | + | C1H2g27881 | CX2g019320 | - | - | - | Detail |
| C2H2g17403 | 2:25,946,401-25,952,525 | + | C1H2g27343 | CX2g023375 | LOC_Os02g45980 | Os02g0684900 | - | Detail |
| C2H2g16948 | 2:25,953,171-25,953,797 | + | - | - | - | - | - | Detail |
| C2H2g07817 | 2:25,957,041-25,957,384 | + | C1H2g11465 | CX7g047983 | - | Os02g0117400 | - | Detail |
| C2H2g27686 | 2:25,963,024-25,965,649 | - | C1H2g24305 | CX2g019726 | LOC_Os02g46030 | Os02g0685200 | OsMyb1R, LHY-like_chr.2, CMYB1 | Detail |
| C2H2g27892 | 2:25,976,877-25,979,425 | - | C1H2g27920 | CX2g023473 | LOC_Os02g46080 | Os02g0685600 | - | Detail |
| C2H2g03411 | 2:25,981,902-25,987,049 | + | C1H2g28250 | CX2g020113 | LOC_Os02g46090 | Os02g0685900 | OsCPK5 | Detail |
| C2H2g19134 | 2:25,991,362-25,991,931 | - | C1H2g26668 | CX2g020098 | LOC_Os02g46100 | Os02g0686100 | OsATL32 | Detail |
| C2H2g06457 | 2:25,999,464-26,003,538 | - | C1H2g04547 | CX2g020840 | LOC_Os02g46120 | Os02g0686300 | - | Detail |
| C2H2g09278 | 2:26,003,711-26,008,957 | + | C1H2g29736 | CX2g022035 | LOC_Os02g46130 | Os02g0686400 | - | Detail |
| C2H2g01630 | 2:26,011,921-26,012,752 | + | C1H2g13130 | CX2g023233 | LOC_Os02g46140 | Os02g0686500 | - | Detail |
| C2H2g28721 | 2:26,013,006-26,017,407 | - | C1H2g25245 | CX2g022938 | LOC_Os02g46150 | Os02g0686600 | - | Detail |
| C2H2g18789 | 2:26,024,379-26,024,747 | - | C1H2g26309 | CX2g019053 | LOC_Os02g46190 | Os02g0686700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |