| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g07379 | 7:1,284,437-1,284,955 | + | C2H7g30099 | CX7g046883 | LOC_Os07g03690 | Os07g0128800 | - | Detail |
| C1H7g03279 | 7:1,291,717-1,292,223 | + | C2H7g02005 | CX7g046883 | LOC_Os07g03710 | Os07g0129200 | PR1A, OsPR1a, OsPR-1a, PR1a, OsPR1#074, OsPR1-74, PR-1a, OsSCP, SCP | Detail |
| C1H7g25003 | 7:1,303,236-1,305,696 | - | C2H7g21640 | CX7g049764 | LOC_Os07g03760 | - | - | Detail |
| C1H7g21106 | 7:1,333,451-1,339,476 | + | C2H7g07364 | CX7g047059 | LOC_Os07g03770 | Os07g0129700 | OSH15, Oskn3 | Detail |
| C1H7g23406 | 7:1,344,162-1,344,768 | - | C2H7g12349 | - | LOC_Os07g03780 | Os07g0129800 | - | Detail |
| C1H7g13341 | 7:1,348,098-1,350,020 | - | C2H7g17374 | - | LOC_Os07g03790 | Os07g0129900 | - | Detail |
| C1H7g01046 | 7:1,354,016-1,357,784 | + | C2H7g09208 | - | - | Os07g0130000 | - | Detail |
| C1H7g10554 | 7:1,358,011-1,360,053 | - | C2H7g28273 | - | LOC_Os07g03810 | Os07g0130100 | - | Detail |
| C1H7g13345 | 7:1,362,971-1,365,064 | - | C2H7g22634 | - | LOC_Os07g03820 | Os07g0130200 | - | Detail |
| C1H7g20486 | 7:1,366,531-1,369,170 | - | C2H7g04790 | - | LOC_Os07g03830 | Os07g0131375 | - | Detail |
| C1H7g13914 | 7:1,370,512-1,372,590 | - | C2H7g13157 | - | LOC_Os07g03840 | Os07g0130400 | - | Detail |
| C1H7g22179 | 7:1,373,843-1,374,382 | - | - | - | - | - | - | Detail |
| C1H7g21616 | 7:1,375,748-1,377,748 | - | C2H7g09954 | - | LOC_Os07g03890 | Os07g0262800 | - | Detail |
| C1H7g05952 | 7:1,379,335-1,381,323 | - | C2H7g14045 | - | LOC_Os07g03860 | Os07g0131375 | - | Detail |
| C1H7g30530 | 7:1,382,905-1,384,935 | - | C2H7g25684 | - | LOC_Os07g03870 | Os07g0130800 | - | Detail |
| C1H7g17964 | 7:1,383,025-1,383,546 | + | C2H7g18582 | - | LOC_Os07g03849 | Os07g0130500 | - | Detail |
| C1H7g19523 | 7:1,389,128-1,391,047 | - | - | - | - | - | - | Detail |
| C1H7g31707 | 7:1,391,236-1,396,119 | - | C2H7g19397 | - | LOC_Os07g03880 | Os07g0262800 | - | Detail |
| C1H7g19595 | 7:1,391,252-1,392,807 | + | C2H7g18582 | - | LOC_Os07g03849 | Os07g0130500 | - | Detail |
| C1H7g21406 | 7:1,396,162-1,403,733 | - | C2H7g17372 | - | LOC_Os07g03890 | Os07g0131375 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g15485 | 1:3,125,900-3,126,514 | - | C1H1g11658 | - | - | - | - | Detail |
| C2H1g18505 | 1:3,129,253-3,133,224 | - | C1H1g17887 | CX1g002044 | LOC_Os01g07520 | Os01g0169900 | - | Detail |
| C2H1g07559 | 1:3,134,423-3,138,097 | - | C1H1g06478 | CX1g001973 | LOC_Os01g07530 | Os01g0170000 | - | Detail |
| C2H1g19408 | 1:3,146,269-3,151,457 | + | C1H1g14550 | CX1g006120 | LOC_Os01g07540 | Os01g0170100 | - | Detail |
| C2H1g12386 | 1:3,156,879-3,160,770 | + | C1H1g09374 | CX1g002596 | LOC_Os01g07560 | Os01g0170300 | - | Detail |
| C2H1g26052 | 1:3,165,620-3,171,740 | - | C1H1g15607 | CX1g002169 | LOC_Os01g07570 | Os01g0170500 | - | Detail |
| C2H1g23567 | 1:3,177,790-3,180,762 | + | C1H1g29516 | CX1g005563 | LOC_Os01g07590 | Os01g0170600 | - | Detail |
| C2H1g19388 | 1:3,181,446-3,182,620 | + | C1H1g03810 | CX1g006498 | LOC_Os01g07590 | Os01g0849600 | - | Detail |
| C2H1g10083 | 1:3,184,294-3,187,662 | + | C1H1g30649 | CX1g001258 | LOC_Os01g07600 | Os01g0170700 | - | Detail |
| C2H1g28231 | 1:3,193,277-3,195,028 | + | C1H1g08776 | CX1g004971 | LOC_Os01g07610 | Os01g0170800 | - | Detail |
| C2H1g06196 | 1:3,197,486-3,197,839 | - | C1H1g30232 | CX1g005520 | LOC_Os01g07620 | Os01g0170900 | - | Detail |
| C2H1g29680 | 1:3,202,417-3,208,091 | - | C1H1g10821 | CX1g000199 | LOC_Os01g07630 | Os01g0171000 | - | Detail |
| C2H1g04571 | 1:3,214,303-3,216,970 | - | C1H1g27422 | CX1g001021 | LOC_Os01g07640 | Os01g0171100 | - | Detail |
| C2H1g23784 | 1:3,235,772-3,239,402 | - | C1H1g10155 | CX1g001907 | LOC_Os01g07700 | Os01g0171800 | - | Detail |
| C2H1g20738 | 1:3,242,854-3,244,377 | + | C1H1g26958 | CX1g002415 | LOC_Os01g07710 | - | - | Detail |
| C2H1g20386 | 1:3,245,079-3,248,708 | - | C1H1g20095 | CX1g006763 | LOC_Os01g07720 | Os01g0172000 | - | Detail |
| C2H1g03942 | 1:3,251,344-3,253,664 | + | C1H1g10981 | CX1g003588 | LOC_Os01g07730 | Os01g0172100 | - | Detail |
| C2H1g18220 | 1:3,253,753-3,258,530 | - | C1H1g04902 | CX1g004788 | LOC_Os01g07740 | Os01g0172200 | OsDB10 | Detail |
| C2H1g18869 | 1:3,260,405-3,262,934 | - | C1H1g23634 | CX1g001295 | LOC_Os01g07750 | Os01g0172300 | - | Detail |
| C2H1g28778 | 1:3,264,187-3,268,422 | - | C1H1g21846 | CX1g001900 | LOC_Os01g07760 | Os01g0172400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |