| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g29005 | 6:26,207,031-26,208,903 | + | C2H6g25880 | CX6g044178 | LOC_Os06g49770 | Os06g0711900 | - | Detail |
| C1H6g26906 | 6:26,209,493-26,210,218 | + | C2H6g25410 | CX6g042719 | LOC_Os06g49780 | Os06g0712200 | - | Detail |
| C1H6g13114 | 6:26,214,514-26,219,749 | + | C2H6g17872 | CX6g045719 | LOC_Os06g49790 | Os06g0712300 | - | Detail |
| C1H6g03875 | 6:26,219,980-26,225,870 | - | C2H6g14735 | CX6g043609 | LOC_Os06g49800 | Os06g0712400 | - | Detail |
| C1H6g12321 | 6:26,228,621-26,232,549 | + | C2H6g30105 | CX6g045505 | LOC_Os06g49810 | Os06g0712500 | - | Detail |
| C1H6g15822 | 6:26,262,692-26,266,452 | - | C2H6g04779 | CX6g042882 | LOC_Os06g49840 | Os06g0712700 | SPW1, spw1, MADS16, OsMADS16 | Detail |
| C1H6g23833 | 6:26,271,070-26,274,589 | + | C2H6g13587 | CX6g041789 | LOC_Os06g49860 | Os06g0712800 | OsPMT16 | Detail |
| C1H6g00044 | 6:26,276,898-26,278,709 | - | C2H6g09917 | CX6g042137 | LOC_Os06g49870 | Os06g0712900 | - | Detail |
| C1H6g14044 | 6:26,285,643-26,287,102 | + | C2H6g23411 | CX6g045047 | LOC_Os06g49880 | Os06g0713000 | - | Detail |
| C1H6g05528 | 6:26,294,310-26,298,478 | - | C2H6g03582 | CX6g041542 | LOC_Os06g49890 | Os06g0713100 | - | Detail |
| C1H6g08844 | 6:26,301,068-26,303,383 | + | C2H6g04835 | CX6g045577 | LOC_Os06g49920 | Os06g0713300 | - | Detail |
| C1H6g21865 | 6:26,305,004-26,311,438 | - | C2H6g28383 | CX6g043136 | LOC_Os06g49930 | Os06g0713400 | - | Detail |
| C1H6g25348 | 6:26,314,222-26,318,213 | - | C2H6g28713 | - | - | - | - | Detail |
| C1H6g24270 | 6:26,319,352-26,323,017 | + | C2H6g15408 | CX6g045220 | LOC_Os06g49970 | Os06g0713800 | Amy2A | Detail |
| C1H6g10061 | 6:26,324,968-26,327,362 | - | C2H6g18009 | CX6g043803 | LOC_Os06g49980 | Os06g0713900 | - | Detail |
| C1H6g23571 | 6:26,328,359-26,332,865 | - | C2H6g23408 | CX6g043515 | LOC_Os06g49990 | Os06g0714000 | - | Detail |
| C1H6g04457 | 6:26,333,596-26,335,731 | - | C2H6g06674 | CX6g042982 | LOC_Os06g50000 | Os06g0714100 | - | Detail |
| C1H6g20892 | 6:26,344,319-26,351,067 | + | C2H6g13072 | CX6g044128 | LOC_Os06g50030 | Os06g0714200 | - | Detail |
| C1H6g10648 | 6:26,359,113-26,359,547 | - | C2H6g06613 | CX6g043738 | LOC_Os06g50040 | Os06g0714300 | - | Detail |
| C1H6g16010 | 6:26,379,404-26,382,989 | + | C2H6g05445 | CX6g042358 | LOC_Os06g50050 | Os06g0714500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g08986 | 3:31,065,678-31,067,028 | + | C1H3g09793 | CX3g027906 | LOC_Os03g59670 | Os03g0811400 | - | Detail |
| C2H3g03566 | 3:31,078,144-31,081,813 | - | C1H3g28609 | CX3g026137 | LOC_Os03g59680 | Os03g0811500 | - | Detail |
| C2H3g09547 | 3:31,083,437-31,084,402 | - | C1H3g20712 | CX3g028706 | LOC_Os03g59690 | Os03g0811550 | - | Detail |
| C2H3g28941 | 3:31,084,787-31,087,804 | - | C1H3g19969 | CX3g027737 | LOC_Os03g59700 | Os03g0811600 | - | Detail |
| C2H3g05006 | 3:31,090,307-31,091,349 | - | C1H3g19079 | CX3g025408 | LOC_Os03g59720 | Os03g0811800 | - | Detail |
| C2H3g19593 | 3:31,099,329-31,113,075 | - | C1H3g19228 | CX3g028422 | - | Os03g0812000 | - | Detail |
| C2H3g16505 | 3:31,118,922-31,121,226 | + | C1H3g24075 | CX3g025855 | LOC_Os03g59760 | Os03g0812200 | - | Detail |
| C2H3g07257 | 3:31,130,197-31,130,787 | + | C1H3g03324 | CX3g026231 | LOC_Os03g59790 | Os03g0812800 | OsEFH1 | Detail |
| C2H3g14485 | 3:31,131,619-31,133,439 | + | C1H3g03324 | CX3g026231 | LOC_Os03g59790 | Os03g0812800 | OsEFH1 | Detail |
| C2H3g21102 | 3:31,137,403-31,138,940 | - | C1H3g23671 | CX3g025448 | LOC_Os03g59840 | - | - | Detail |
| C2H3g09561 | 3:31,140,041-31,141,828 | - | C1H3g23671 | CX3g025448 | LOC_Os03g59840 | Os03g0813200 | - | Detail |
| C2H3g11227 | 3:31,155,869-31,157,241 | + | C1H3g23594 | CX3g030353 | LOC_Os03g60080 | Os03g0815100 | OsNAC19, SNAC1 | Detail |
| C2H3g24873 | 3:31,157,868-31,164,045 | - | C1H3g00328 | CX3g029581 | LOC_Os03g60090 | Os03g0815200 | - | Detail |
| C2H3g26221 | 3:31,165,040-31,165,405 | - | C1H3g20553 | - | - | Os03g0815332 | - | Detail |
| C2H3g04086 | 3:31,165,074-31,166,415 | + | C1H3g20794 | CX3g025237 | LOC_Os03g60100 | Os03g0815400 | - | Detail |
| C2H3g14885 | 3:31,172,880-31,176,532 | + | C1H3g22427 | CX3g029363 | LOC_Os03g60110 | Os03g0815700 | Spin1, SPIN1 | Detail |
| C2H3g05216 | 3:31,179,048-31,179,794 | - | C1H3g09437 | CX3g030003 | LOC_Os03g60120 | Os03g0815800 | - | Detail |
| C2H3g17896 | 3:31,181,760-31,184,493 | - | C1H3g16381 | CX3g030342 | LOC_Os03g60130 | Os03g0815900 | - | Detail |
| C2H3g03956 | 3:31,187,533-31,188,743 | - | C1H3g12909 | CX3g025316 | LOC_Os03g60140 | Os03g0816000 | - | Detail |
| C2H3g17236 | 3:31,189,389-31,193,270 | - | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |