| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g17037 | 6:25,998,476-25,999,487 | - | C2H6g17976 | CX6g043522 | LOC_Os06g49200 | Os06g0705500 | - | Detail |
| C1H6g06789 | 6:26,004,128-26,006,272 | + | C2H6g01709 | CX6g042299 | LOC_Os06g49210 | Os06g0705600 | - | Detail |
| C1H6g02632 | 6:26,010,222-26,012,560 | + | C2H6g20644 | CX6g045693 | LOC_Os06g49220 | Os06g0705700 | - | Detail |
| C1H6g03967 | 6:26,014,401-26,016,334 | + | C2H6g02964 | CX6g045693 | LOC_Os06g49230 | Os06g0706100 | - | Detail |
| C1H6g24113 | 6:26,016,399-26,017,202 | + | C2H6g07764 | CX6g045693 | LOC_Os06g49240 | Os06g0706100 | - | Detail |
| C1H6g07579 | 6:26,020,059-26,024,374 | + | C2H6g16936 | CX6g044738 | LOC_Os06g49250 | Os06g0706400 | OsPTR9 | Detail |
| C1H6g06492 | 6:26,028,504-26,032,588 | - | C2H6g22144 | CX6g043317 | LOC_Os06g49260 | Os06g0706600 | - | Detail |
| C1H6g17051 | 6:26,034,592-26,034,936 | - | - | CX6g045688 | LOC_Os06g49290 | Os06g0706700 | - | Detail |
| C1H6g14791 | 6:26,035,770-26,037,647 | - | C2H6g07496 | CX6g045701 | LOC_Os06g49300 | Os06g0707000 | XYXT1 | Detail |
| C1H6g07781 | 6:26,040,509-26,047,709 | + | C2H6g02584 | CX6g042851 | LOC_Os06g49310 | Os06g0707100 | - | Detail |
| C1H6g30332 | 6:26,047,531-26,049,525 | - | C2H6g28355 | CX6g044744 | LOC_Os06g49320 | Os06g0707200 | OsXAT4 | Detail |
| C1H6g13202 | 6:26,052,332-26,053,759 | - | - | CX6g043747 | LOC_Os06g49340 | Os06g0707300 | - | Detail |
| C1H6g20503 | 6:26,057,382-26,063,792 | - | C2H6g09646 | CX6g043432 | LOC_Os06g49360 | Os06g0707400 | - | Detail |
| C1H6g28571 | 6:26,074,403-26,078,854 | - | C2H6g12364 | CX6g043180 | LOC_Os06g49420 | Os06g0707700 | - | Detail |
| C1H6g18704 | 6:26,079,665-26,081,103 | - | C2H6g06456 | - | - | - | - | Detail |
| C1H6g17358 | 6:26,082,804-26,087,763 | + | C2H6g06263 | CX6g042732 | LOC_Os06g49430 | Os06g0708000 | BWMK1, OsBWMK1M | Detail |
| C1H6g07108 | 6:26,088,827-26,093,715 | - | C2H6g00786 | CX6g043918 | LOC_Os06g49440 | Os06g0708100 | - | Detail |
| C1H6g25506 | 6:26,094,009-26,100,445 | + | C2H6g22817 | CX6g041443 | LOC_Os06g49450 | Os06g0708200 | OsMTOPVIB | Detail |
| C1H6g16157 | 6:26,101,107-26,103,018 | + | C2H6g13876 | CX6g042713 | LOC_Os06g49460 | Os06g0708300 | - | Detail |
| C1H6g26774 | 6:26,103,935-26,105,851 | + | C2H6g01779 | CX6g043935 | LOC_Os06g49470 | Os06g0708400 | CYP19-4, OsCYP19-4, OsCYP-16, OsCYP19-3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g19970 | 1:11,254,787-11,258,257 | - | C1H1g09638 | CX1g005436 | LOC_Os01g22980 | Os01g0332800 | - | Detail |
| C2H1g05656 | 1:11,261,077-11,263,960 | - | C1H1g01670 | CX1g002203 | LOC_Os01g22990 | Os01g0332900 | - | Detail |
| C2H1g03166 | 1:11,280,461-11,281,526 | - | C1H1g19845 | - | LOC_Os09g23399 | Os09g0398300 | - | Detail |
| C2H1g16486 | 1:11,302,770-11,303,830 | + | - | CX9g056496 | - | - | - | Detail |
| C2H1g26385 | 1:11,308,836-11,311,034 | + | C1H1g10843 | CX1g004352 | LOC_Os01g23070 | Os01g0333600 | - | Detail |
| C2H1g15414 | 1:11,329,377-11,331,719 | + | C1H1g07869 | CX1g006442 | LOC_Os01g23070 | Os01g0335600 | - | Detail |
| C2H1g23874 | 1:11,334,425-11,337,444 | + | C1H1g08644 | CX1g000930 | LOC_Os01g23380 | Os01g0335700 | - | Detail |
| C2H1g14248 | 1:11,349,300-11,355,844 | + | C1H1g24526 | CX1g004853 | LOC_Os01g23530 | Os01g0337100 | OsTPS1 | Detail |
| C2H1g00772 | 1:11,360,172-11,361,139 | + | C1H1g20227 | - | LOC_Os01g23580 | Os01g0337500 | - | Detail |
| C2H1g23715 | 1:11,365,221-11,368,699 | + | C1H1g15203 | CX1g006068 | LOC_Os01g23580 | Os01g0337500 | - | Detail |
| C2H1g14719 | 1:11,370,005-11,385,171 | - | C1H1g02550 | CX1g006612 | LOC_Os01g23590 | Os01g0337600 | - | Detail |
| C2H1g25789 | 1:11,388,289-11,396,160 | + | C1H1g31824 | CX1g005196 | LOC_Os01g23610 | Os01g0337900 | OsLPD2 | Detail |
| C2H1g07427 | 1:11,402,045-11,404,214 | + | C1H1g07766 | CX1g003937 | LOC_Os01g23620 | Os01g0338000 | - | Detail |
| C2H1g12886 | 1:11,407,150-11,409,961 | + | C1H1g18847 | CX1g003576 | LOC_Os01g23630 | Os01g0338100 | - | Detail |
| C2H1g27271 | 1:11,412,373-11,420,722 | + | C1H1g20446 | CX1g002951 | LOC_Os01g23640 | Os01g0338200 | - | Detail |
| C2H1g02413 | 1:11,429,655-11,433,911 | - | C1H1g02265 | CX1g002645 | LOC_Os01g23680 | Os01g0338600 | - | Detail |
| C2H1g16601 | 1:11,456,503-11,458,246 | - | C1H1g28850 | CX1g005605 | LOC_Os01g23710 | Os01g0339500 | - | Detail |
| C2H1g21837 | 1:11,461,886-11,464,026 | - | C1H1g28850 | CX1g005605 | - | - | - | Detail |
| C2H1g18968 | 1:11,464,821-11,466,959 | + | C1H1g03283 | - | LOC_Os10g25600 | Os01g0339600 | - | Detail |
| C2H1g23562 | 1:11,468,109-11,468,339 | - | C1H1g03194 | CX1g002019 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |