| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g09670 | 6:25,880,842-25,883,508 | - | C2H6g03801 | CX6g043434 | LOC_Os06g48980 | Os06g0703000 | - | Detail |
| C1H6g18502 | 6:25,887,723-25,892,407 | - | C2H6g17371 | CX6g045780 | LOC_Os06g49010 | Os06g0703500 | - | Detail |
| C1H6g16279 | 6:25,896,374-25,897,321 | - | - | - | LOC_Os06g49020 | Os06g0703600 | - | Detail |
| C1H6g29648 | 6:25,898,415-25,901,197 | + | C2H6g15424 | CX6g045783 | LOC_Os06g49030 | Os06g0703800 | - | Detail |
| C1H6g07308 | 6:25,910,174-25,919,099 | + | C2H6g26654 | CX6g045465 | LOC_Os06g49040 | Os06g0703900 | - | Detail |
| C1H6g31643 | 6:25,920,872-25,924,324 | + | C2H6g01098 | CX6g043942 | LOC_Os06g49060 | Os06g0704100 | - | Detail |
| C1H6g21776 | 6:25,925,126-25,925,469 | - | C2H6g14094 | CX6g043513 | LOC_Os06g49070 | Os06g0704200 | - | Detail |
| C1H6g04818 | 6:25,926,051-25,929,679 | + | C2H6g09929 | CX6g042446 | LOC_Os06g49080 | Os06g0704300 | C3H46, OsC3H46, LIC, OsLIC | Detail |
| C1H6g07512 | 6:25,931,685-25,936,836 | + | C2H6g08437 | CX6g045885 | LOC_Os06g49090 | Os06g0704400 | - | Detail |
| C1H6g27120 | 6:25,942,129-25,943,754 | + | C2H6g13363 | CX6g044421 | LOC_Os06g49100 | Os06g0704500 | - | Detail |
| C1H6g00037 | 6:25,945,314-25,949,616 | - | C2H6g08289 | CX6g045141 | LOC_Os06g49110 | Os06g0704600 | - | Detail |
| C1H6g20822 | 6:25,950,325-25,954,757 | - | C2H6g04274 | CX6g043594 | LOC_Os06g49120 | Os06g0704700 | - | Detail |
| C1H6g30381 | 6:25,956,036-25,970,978 | - | C2H6g29592 | CX6g043593 | LOC_Os06g49130 | Os06g0704800 | OsHAC704, OsHAC12 | Detail |
| C1H6g14385 | 6:25,971,877-25,974,591 | + | C2H6g27374 | CX6g041788 | LOC_Os06g49140 | Os06g0704900 | - | Detail |
| C1H6g27051 | 6:25,976,378-25,978,262 | + | C2H6g16318 | CX6g041568 | LOC_Os06g49150 | Os06g0705000 | OsGMT1 | Detail |
| C1H6g17550 | 6:25,979,273-25,980,346 | + | C2H6g07212 | CX6g041902 | LOC_Os06g49160 | Os06g0705100 | - | Detail |
| C1H6g05795 | 6:25,981,184-25,984,997 | - | C2H6g22144 | CX6g044278 | LOC_Os06g49170 | Os06g0705200 | - | Detail |
| C1H6g31669 | 6:25,987,417-25,993,127 | - | C2H6g27734 | CX6g041917 | LOC_Os06g49185 | Os06g0705300 | - | Detail |
| C1H6g13928 | 6:25,993,988-25,996,225 | - | C2H6g16745 | CX6g041917 | LOC_Os06g46840 | Os06g0705350 | - | Detail |
| C1H6g11993 | 6:25,997,556-25,997,852 | + | - | CX6g044181 | LOC_Os06g49190 | Os06g0705400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g08783 | 3:1,504,261-1,506,546 | - | C1H3g26036 | CX3g029309 | - | Os03g0130750 | - | Detail |
| C2H3g05534 | 3:1,508,678-1,514,731 | + | C1H3g08344 | CX3g026936 | LOC_Os03g03870 | Os03g0130800 | - | Detail |
| C2H3g28810 | 3:1,523,479-1,528,964 | + | C1H3g09568 | CX3g028472 | LOC_Os03g03880 | Os03g0130900 | - | Detail |
| C2H3g29451 | 3:1,530,366-1,532,643 | + | C1H3g20543 | CX3g030865 | LOC_Os03g03890 | Os03g0131000 | - | Detail |
| C2H3g00921 | 3:1,533,299-1,538,488 | - | C1H3g20869 | CX3g029241 | LOC_Os03g03900 | Os03g0131100 | OsNLP1 | Detail |
| C2H3g05397 | 3:1,544,045-1,547,098 | - | C1H3g21207 | CX3g027343 | LOC_Os03g03910 | Os03g0131200 | - | Detail |
| C2H3g25663 | 3:1,547,910-1,552,708 | - | C1H3g29193 | CX3g027343 | LOC_Os03g03920 | Os03g0131300 | - | Detail |
| C2H3g07948 | 3:1,555,384-1,561,050 | - | C1H3g04201 | CX3g029745 | LOC_Os03g03930 | Os03g0131400 | - | Detail |
| C2H3g06029 | 3:1,561,223-1,564,251 | + | C1H3g28233 | CX3g026999 | LOC_Os03g03949 | Os03g0131500 | - | Detail |
| C2H3g05494 | 3:1,565,001-1,566,058 | + | C1H3g02854 | CX3g028529 | LOC_Os03g03980 | Os03g0131800 | - | Detail |
| C2H3g22495 | 3:1,567,205-1,568,371 | - | C1H3g31581 | CX3g029556 | LOC_Os03g03990 | Os03g0131900 | OscpSRP43, cpSRP43 | Detail |
| C2H3g11143 | 3:1,571,772-1,575,611 | + | C1H3g06072 | CX3g026513 | LOC_Os03g04000 | Os03g0132000 | - | Detail |
| C2H3g03337 | 3:1,582,243-1,584,005 | + | C1H3g07116 | CX3g026620 | LOC_Os03g04020 | Os03g0132200 | - | Detail |
| C2H3g07678 | 3:1,587,785-1,591,137 | - | C1H3g18409 | CX3g028694 | LOC_Os03g04030 | Os03g0132300 | - | Detail |
| C2H3g02332 | 3:1,607,893-1,612,709 | + | C1H3g11603 | CX3g030334 | LOC_Os03g04050 | Os03g0132800 | OsBSK1-1 | Detail |
| C2H3g25865 | 3:1,614,014-1,615,711 | - | C1H3g17948 | CX3g030345 | LOC_Os03g04070 | Os03g0133000 | NAC22, ONAC022 | Detail |
| C2H3g07517 | 3:1,623,374-1,623,721 | + | C1H3g06331 | CX3g030686 | LOC_Os03g04080 | Os03g0133100 | - | Detail |
| C2H3g25074 | 3:1,627,819-1,631,744 | + | C1H3g25947 | CX3g029725 | LOC_Os03g04100 | Os03g0133300 | ESV1, Os-ESV1, LA3 | Detail |
| C2H3g16071 | 3:1,632,868-1,633,560 | + | C1H3g11058 | CX3g025596 | LOC_Os03g04110 | Os03g0133400 | CEBiP, OsCEBiP | Detail |
| C2H3g08230 | 3:1,636,315-1,638,452 | - | C1H3g20995 | CX3g031140 | LOC_Os03g04120 | Os03g0133500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |